FFCP PHASE1:Hg19::chr17:38497874..38497884,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:38497874..38497884,+
|short_description=p30@RARA
|description=CAGE_peak_30_at_RARA_5end
|association_with_transcript=-386bp_to_NM_001024809_5end
|EntrezG...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5914 | |EntrezGene=5914 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=9864 | |HGNC=9864 | ||
|TSSclassifier=strong | |||
|UniProt=F1D8N9,P10276 | |UniProt=F1D8N9,P10276 | ||
|association_with_transcript=-386bp_to_NM_001024809_5end | |||
|cluster_id=chr17:38497874..38497884,+ | |||
|description=CAGE_peak_30_at_RARA_5end | |||
|id=chr17:38497874..38497884,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.47e-20!140;CL:0000860!4.30e-18!45;CL:0002057!4.37e-18!42;CL:0000766!5.10e-18!76;CL:0002087!1.70e-15!119;CL:0000988!3.02e-15!182;CL:0000037!4.52e-15!172;CL:0000566!4.52e-15!172;CL:0002031!2.20e-13!124;CL:0002032!2.78e-13!165;CL:0000837!2.78e-13!165;CL:0000839!1.42e-11!70;CL:0000557!2.52e-11!71;CL:0002194!6.76e-11!63;CL:0000576!6.76e-11!63;CL:0000040!6.76e-11!63;CL:0000559!6.76e-11!63;CL:0000763!1.94e-10!112;CL:0000049!1.94e-10!112;CL:0002009!2.17e-10!65;CL:0000094!3.30e-10!8;CL:0000623!3.18e-08!3;CL:0000825!3.18e-08!3;CL:0000842!6.62e-08!3;CL:0000898!1.32e-07!3;CL:0000767!2.33e-07!3;CL:0000081!3.60e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000623;2.25e-20;3!CL:0000775;9.52e-20;3!CL:0000094;1.33e-16;8!CL:0000895;1.92e-15;1!CL:0000081;3.01e-12;11!CL:0002393;2.29e-10;6!CL:0002397;2.29e-10;6!CL:0000771;1.49e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,2.48e-20,3;CL:0000825,2.48e-20,3;CL:0000775,1.27e-19,3;CL:0000094,1.57e-16,8;CL:0000810,1.78e-15,1;CL:0000895,1.78e-15,1;CL:0002436,1.78e-15,1;CL:0002427,1.78e-15,1;CL:0002428,1.78e-15,1;CL:0002429,1.78e-15,1;CL:0002433,1.78e-15,1;CL:0002431,1.78e-15,1;CL:0002432,1.78e-15,1;CL:0000081,3.38e-12,11;CL:0000738,2.32e-11,136;CL:0002032,2.03e-09,161;CL:0000837,2.03e-09,161;CL:0000037,5.63e-09,168;CL:0000771,1.50e-08,2;CL:0000988,1.85e-08,177;CL:0000893,2.15e-08,2;CL:0002489,2.15e-08,2;CL:0000809,2.15e-08,2;CL:0000808,2.15e-08,2;CL:0000894,2.15e-08,2;CL:0000806,2.15e-08,2;CL:0000807,2.15e-08,2;CL:0000805,2.15e-08,2;CL:0002425,2.15e-08,2;CL:0002393,3.14e-07,9;CL:0002397,3.14e-07,9;CL:0002087,4.16e-07,115;CL:0000838,7.66e-07,52;CL:0002031,8.81e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002427;1.92e-15;1!CL:0002425;2.23e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.82e-14!102;UBERON:0003061!2.82e-14!102;UBERON:0002193!3.59e-13!112;UBERON:0002371!2.31e-09!80;UBERON:0001474!4.00e-09!86;UBERON:0002405!5.51e-08!115;UBERON:0004765!7.04e-07!101;UBERON:0001434!7.04e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0.309632246632152,0,0,0,0,0,0,1.66198622559563,1.40381113229099,0.434021741431704,0,0,0,0,0,0,0.232429036905685,1.23350366406548,0.929119112685311,0,0.256160706529101,0.236482229888585,0,0,0,0.188242339542605,0,0.449446968890169,0.612167784741805,0.641858054152187,0,0,0,0.426224750532694,0,0,0.622822248995575,0,0.521482918420201,0.217188844705117,0,0,0.316462387440884,0.211255286311942,0,0,0.673971786878971,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,1.70763890732835,0,0.764546456250458,3.96513985737078,0.560508562981536,0,0,0,0.411202997999018,0,0.32592226663359,0,0,0,0.294605907474837,0.443067789167242,0,0,0,0,0,0,0.14828656316206,0,0,0,1.53288197440768,0,0,0,0,0,0,0,0,0,0,0,1.06976078313403,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576479813667846,0.75745460055828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,3.23441362289276,3.33691894327346,0,0,0,0,0,1.49801404789436,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.862856803274467,0.533637789017222,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0.170093705276516,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0.110579259931225,0,0,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0.104421949505455,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0.118920090777569,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0.112131862580613,0.0636471582781649,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0.309632246632152,0,0,0,0,0,0,1.66198622559563,1.40381113229099,0.434021741431704,0,0,0,0,0,0,0.232429036905685,1.23350366406548,0.929119112685311,0,0.256160706529101,0.236482229888585,0,0,0,0.188242339542605,0,0.449446968890169,0.612167784741805,0.641858054152187,0,0,0,0.426224750532694,0,0,0.622822248995575,0,0.521482918420201,0.217188844705117,0,0,0.316462387440884,0.211255286311942,0,0,0.673971786878971,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,1.70763890732835,0,0.764546456250458,3.96513985737078,0.560508562981536,0,0,0,0.411202997999018,0,0.32592226663359,0,0,0,0.294605907474837,0.443067789167242,0,0,0,0,0,0,0.14828656316206,0,0,0,1.53288197440768,0,0,0,0,0,0,0,0,0,0,0,1.06976078313403,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576479813667846,0.75745460055828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,3.23441362289276,3.33691894327346,0,0,0,0,0,1.49801404789436,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.862856803274467,0.533637789017222,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0.170093705276516,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0.110579259931225,0,0,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0.104421949505455,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0.118920090777569,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0.112131862580613,0.0636471582781649,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p30@RARA | |||
}} | }} |
Latest revision as of 01:13, 20 September 2015
Short description: | p30@RARA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_RARA_5end |
Coexpression cluster: | NA |
Association with transcript: | -386bp_to_NM_001024809_5end |
EntrezGene: | RARA |
HGNC: | 9864 |
UniProt: | F1D8N9P10276 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data