FFCP PHASE1:Hg19::chr1:224936421..224936424,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:224936421..224936424,+ | |||
|description=CAGE_peak_at_chr1:224936421..224936424,+ | |description=CAGE_peak_at_chr1:224936421..224936424,+ | ||
|id=chr1:224936421..224936424,+ | |id=chr1:224936421..224936424,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002573;4.71e-10;2!CL:0002379;1.31e-08;1!CL:0000228;3.69e-08;1!CL:0002372;3.69e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002573,2.36e-10,2;CL:0002379,1.22e-08,1;CL:0000228,3.57e-08,1;CL:0002372,3.57e-08,1;CL:0000243,8.29e-07,15;CL:0000125,8.29e-07,15;CL:0000030,8.29e-07,15;CL:0000339,8.29e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.69e-08;1 | |||
|ontology_enrichment_disease=DOID:2394!4.47e-13!14 | |ontology_enrichment_disease=DOID:2394!4.47e-13!14 | ||
|ontology_enrichment_disease_v019=DOID:3620;1.31e-08;1!DOID:3565;1.31e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,1.22e-08,1;DOID:3565,1.22e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0000956!1.19e-16!25;UBERON:0000203!1.19e-16!25;UBERON:0001869!1.30e-16!32;UBERON:0002619!1.53e-16!22;UBERON:0002020!2.07e-16!34;UBERON:0003528!2.07e-16!34;UBERON:0001893!3.60e-15!34;UBERON:0002791!1.27e-14!33;UBERON:0001950!2.45e-14!20;UBERON:0002780!1.64e-13!41;UBERON:0001890!1.64e-13!41;UBERON:0006240!1.64e-13!41;UBERON:0001017!2.10e-13!82;UBERON:0000955!2.10e-13!69;UBERON:0006238!2.10e-13!69;UBERON:0000073!2.97e-13!94;UBERON:0001016!2.97e-13!94;UBERON:0001049!3.16e-13!57;UBERON:0005068!3.16e-13!57;UBERON:0006241!3.16e-13!57;UBERON:0007135!3.16e-13!57;UBERON:0003080!5.43e-13!42;UBERON:0005743!3.35e-12!86;UBERON:0002616!1.21e-10!59;UBERON:0000992!4.94e-10!13;UBERON:0002346!2.01e-08!90;UBERON:0003075!7.33e-08!86;UBERON:0007284!7.33e-08!86;UBERON:0003056!1.05e-07!61;UBERON:0000991!6.73e-07!21;UBERON:0009196!6.73e-07!21;UBERON:0009117!6.73e-07!21;UBERON:0005564!6.73e-07!21 | |ontology_enrichment_uberon=UBERON:0000956!1.19e-16!25;UBERON:0000203!1.19e-16!25;UBERON:0001869!1.30e-16!32;UBERON:0002619!1.53e-16!22;UBERON:0002020!2.07e-16!34;UBERON:0003528!2.07e-16!34;UBERON:0001893!3.60e-15!34;UBERON:0002791!1.27e-14!33;UBERON:0001950!2.45e-14!20;UBERON:0002780!1.64e-13!41;UBERON:0001890!1.64e-13!41;UBERON:0006240!1.64e-13!41;UBERON:0001017!2.10e-13!82;UBERON:0000955!2.10e-13!69;UBERON:0006238!2.10e-13!69;UBERON:0000073!2.97e-13!94;UBERON:0001016!2.97e-13!94;UBERON:0001049!3.16e-13!57;UBERON:0005068!3.16e-13!57;UBERON:0006241!3.16e-13!57;UBERON:0007135!3.16e-13!57;UBERON:0003080!5.43e-13!42;UBERON:0005743!3.35e-12!86;UBERON:0002616!1.21e-10!59;UBERON:0000992!4.94e-10!13;UBERON:0002346!2.01e-08!90;UBERON:0003075!7.33e-08!86;UBERON:0007284!7.33e-08!86;UBERON:0003056!1.05e-07!61;UBERON:0000991!6.73e-07!21;UBERON:0009196!6.73e-07!21;UBERON:0009117!6.73e-07!21;UBERON:0005564!6.73e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0002021;4.03e-13;5!UBERON:0002619;1.67e-10;22!UBERON:0000956;3.14e-09;25!UBERON:0000203;3.14e-09;25!UBERON:0000941;3.69e-08;1!UBERON:0001785;3.69e-08;1!UBERON:0002464;3.69e-08;1!UBERON:0004904;3.69e-08;1!UBERON:0001021;3.69e-08;1!UBERON:0001950;3.78e-08;20!UBERON:0000010;2.31e-07;8!UBERON:0002791;7.65e-07;32!UBERON:0001869;7.65e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.88e-13,5;UBERON:0002619,1.66e-10,22;UBERON:0000956,3.13e-09,25;UBERON:0000203,3.13e-09,25;UBERON:0000941,3.33e-08,1;UBERON:0001785,3.33e-08,1;UBERON:0002464,3.33e-08,1;UBERON:0004904,3.33e-08,1;UBERON:0001021,3.33e-08,1;UBERON:0003902,3.33e-08,1;UBERON:0005425,3.33e-08,1;UBERON:0001950,3.64e-08,20;UBERON:0000010,1.60e-07,8;UBERON:0001016,2.96e-07,89;UBERON:0002791,3.71e-07,32;UBERON:0001869,3.71e-07,32;UBERON:0000349,9.87e-07,5 | |||
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| ||
|short_description=p@chr1:224936421..224936424,+ | |short_description=p@chr1:224936421..224936424,+ | ||
}} | }} |
Latest revision as of 04:27, 28 July 2015
Short description: | p@chr1:224936421..224936424, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:224936421..224936424, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Schwann cell | 2.36e-10 | 2 |
meningothelial cell | 1.22e-08 | 1 |
multinucleate cell | 3.57e-08 | 1 |
myotube | 3.57e-08 | 1 |
glial cell (sensu Vertebrata) | 8.29e-07 | 15 |
glial cell | 8.29e-07 | 15 |
glioblast | 8.29e-07 | 15 |
glioblast (sensu Vertebrata) | 8.29e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 3.88e-13 | 5 |
regional part of cerebral cortex | 1.66e-10 | 22 |
cerebral cortex | 3.13e-09 | 25 |
pallium | 3.13e-09 | 25 |
cranial nerve II | 3.33e-08 | 1 |
cranial nerve | 3.33e-08 | 1 |
nerve trunk | 3.33e-08 | 1 |
nerve connecting eye with brain | 3.33e-08 | 1 |
nerve | 3.33e-08 | 1 |
retinal neural layer | 3.33e-08 | 1 |
presumptive neural retina | 3.33e-08 | 1 |
neocortex | 3.64e-08 | 20 |
peripheral nervous system | 1.60e-07 | 8 |
nervous system | 2.96e-07 | 89 |
regional part of telencephalon | 3.71e-07 | 32 |
cerebral hemisphere | 3.71e-07 | 32 |
limbic system | 9.87e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 1.22e-08 | 1 |
meningioma | 1.22e-08 | 1 |