FFCP PHASE1:Hg19::chr1:206838422..206838456,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:206838422..206838456,+ | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_at_chr1:206838422..206838456,+ | |description=CAGE_peak_at_chr1:206838422..206838456,+ | ||
|id=chr1:206838422..206838456,+ | |id=chr1:206838422..206838456,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.56e-55;4!UBERON:0007284;1.56e-55;4!UBERON:0010226;3.58e-26;1!UBERON:0010227;5.93e-26;1!UBERON:0003104;1.13e-07;31 | |||
|ontology_enrichment_disease=DOID:114!1.66e-22!2;DOID:178!5.05e-12!1;DOID:326!5.05e-12!1;DOID:3978!5.05e-12!1;DOID:3394!5.05e-12!1;DOID:5844!5.05e-12!1;DOID:1287!9.63e-12!4 | |ontology_enrichment_disease=DOID:114!1.66e-22!2;DOID:178!5.05e-12!1;DOID:326!5.05e-12!1;DOID:3978!5.05e-12!1;DOID:3394!5.05e-12!1;DOID:5844!5.05e-12!1;DOID:1287!9.63e-12!4 | ||
|ontology_enrichment_disease_v019=DOID:114;3.53e-50;2!DOID:178;8.64e-26;1!DOID:326;8.64e-26;1!DOID:3978;8.64e-26;1!DOID:3394;8.64e-26;1!DOID:5844;8.64e-26;1!DOID:1287;1.05e-25;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,4.00e-50,2;DOID:178,9.79e-26,1;DOID:326,9.79e-26,1;DOID:3978,9.79e-26,1;DOID:3394,9.79e-26,1;DOID:5844,9.79e-26,1;DOID:1287,1.11e-25,4 | |||
|ontology_enrichment_uberon=UBERON:0004151!1.02e-32!3;UBERON:0003978!1.27e-32!3;UBERON:0009751!1.27e-32!3;UBERON:0000946!1.27e-32!3;UBERON:0002523!1.27e-32!3;UBERON:0005983!1.27e-32!3;UBERON:0002165!1.27e-32!3;UBERON:0002062!1.27e-32!3;UBERON:0007280!1.27e-32!3;UBERON:0007100!6.26e-31!27;UBERON:0002081!2.56e-22!2;UBERON:0002133!2.85e-22!2;UBERON:0003103!4.48e-17!69;UBERON:0000948!1.20e-15!24;UBERON:0005498!1.20e-15!24;UBERON:0004140!1.20e-15!24;UBERON:0009881!1.20e-15!24;UBERON:0004141!1.20e-15!24;UBERON:0003084!1.20e-15!24;UBERON:0007005!1.20e-15!24;UBERON:0004139!1.20e-15!24;UBERON:0004291!1.20e-15!24;UBERON:0002084!3.27e-12!1;UBERON:0002082!3.27e-12!1;UBERON:0004706!3.27e-12!1;UBERON:0002146!3.65e-12!1;UBERON:0005623!3.65e-12!1;UBERON:0002079!4.06e-12!1;UBERON:0002135!4.53e-12!1;UBERON:0002134!5.62e-12!1;UBERON:0005208!5.62e-12!1;UBERON:0005946!5.62e-12!1;UBERON:0005965!5.62e-12!1;UBERON:0002078!5.62e-12!1;UBERON:0000989!6.26e-12!1;UBERON:0008811!6.26e-12!1;UBERON:0006258!6.26e-12!1;UBERON:0005876!6.26e-12!1;UBERON:0004874!6.26e-12!1;UBERON:0007029!6.97e-12!1;UBERON:0007023!1.60e-11!115;UBERON:0001009!4.71e-08!113;UBERON:0002342!1.93e-07!14;UBERON:0005062!1.93e-07!14 | |ontology_enrichment_uberon=UBERON:0004151!1.02e-32!3;UBERON:0003978!1.27e-32!3;UBERON:0009751!1.27e-32!3;UBERON:0000946!1.27e-32!3;UBERON:0002523!1.27e-32!3;UBERON:0005983!1.27e-32!3;UBERON:0002165!1.27e-32!3;UBERON:0002062!1.27e-32!3;UBERON:0007280!1.27e-32!3;UBERON:0007100!6.26e-31!27;UBERON:0002081!2.56e-22!2;UBERON:0002133!2.85e-22!2;UBERON:0003103!4.48e-17!69;UBERON:0000948!1.20e-15!24;UBERON:0005498!1.20e-15!24;UBERON:0004140!1.20e-15!24;UBERON:0009881!1.20e-15!24;UBERON:0004141!1.20e-15!24;UBERON:0003084!1.20e-15!24;UBERON:0007005!1.20e-15!24;UBERON:0004139!1.20e-15!24;UBERON:0004291!1.20e-15!24;UBERON:0002084!3.27e-12!1;UBERON:0002082!3.27e-12!1;UBERON:0004706!3.27e-12!1;UBERON:0002146!3.65e-12!1;UBERON:0005623!3.65e-12!1;UBERON:0002079!4.06e-12!1;UBERON:0002135!4.53e-12!1;UBERON:0002134!5.62e-12!1;UBERON:0005208!5.62e-12!1;UBERON:0005946!5.62e-12!1;UBERON:0005965!5.62e-12!1;UBERON:0002078!5.62e-12!1;UBERON:0000989!6.26e-12!1;UBERON:0008811!6.26e-12!1;UBERON:0006258!6.26e-12!1;UBERON:0005876!6.26e-12!1;UBERON:0004874!6.26e-12!1;UBERON:0007029!6.97e-12!1;UBERON:0007023!1.60e-11!115;UBERON:0001009!4.71e-08!113;UBERON:0002342!1.93e-07!14;UBERON:0005062!1.93e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0004151;5.84e-74;3!UBERON:0003978;1.09e-73;3!UBERON:0000946;1.09e-73;3!UBERON:0007100;7.62e-63;25!UBERON:0002081;1.09e-49;2!UBERON:0002133;1.59e-49;2!UBERON:0000948;3.38e-28;22!UBERON:0002084;3.58e-26;1!UBERON:0002082;3.58e-26;1!UBERON:0002146;4.61e-26;1!UBERON:0005623;4.61e-26;1!UBERON:0002079;5.93e-26;1!UBERON:0002135;8.64e-26;1!UBERON:0002134;1.26e-25;1!UBERON:0005208;1.26e-25;1!UBERON:0004145;1.26e-25;1!UBERON:0005946;1.26e-25;1!UBERON:0005965;1.26e-25;1!UBERON:0002078;1.26e-25;1!UBERON:0010313;8.99e-23;10!UBERON:0003103;6.62e-11;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,5.84e-74,3;UBERON:0003978,9.64e-74,3;UBERON:0009751,9.64e-74,3;UBERON:0000946,9.64e-74,3;UBERON:0002523,9.64e-74,3;UBERON:0005983,9.64e-74,3;UBERON:0002165,9.64e-74,3;UBERON:0002062,9.64e-74,3;UBERON:0007280,9.64e-74,3;UBERON:0007100,3.24e-58,27;UBERON:0002081,1.09e-49,2;UBERON:0010227,1.09e-49,2;UBERON:0002133,1.40e-49,2;UBERON:0004797,3.55e-32,7;UBERON:0002084,3.58e-26,1;UBERON:0002082,3.58e-26,1;UBERON:0010226,3.58e-26,1;UBERON:0002146,4.61e-26,1;UBERON:0005623,4.61e-26,1;UBERON:0002079,5.93e-26,1;UBERON:0000948,6.76e-26,24;UBERON:0005498,6.76e-26,24;UBERON:0004140,6.76e-26,24;UBERON:0009881,6.76e-26,24;UBERON:0004141,6.76e-26,24;UBERON:0003084,6.76e-26,24;UBERON:0007005,6.76e-26,24;UBERON:0004139,6.76e-26,24;UBERON:0004291,6.76e-26,24;UBERON:0002135,7.62e-26,1;UBERON:0002134,1.26e-25,1;UBERON:0005208,1.26e-25,1;UBERON:0005946,1.26e-25,1;UBERON:0005965,1.26e-25,1;UBERON:0002078,1.26e-25,1;UBERON:0003103,2.94e-23,68;UBERON:0010313,8.66e-23,10;UBERON:0002342,8.66e-23,10;UBERON:0005062,8.66e-23,10;UBERON:0001009,3.77e-14,112;UBERON:0007023,6.68e-14,114;UBERON:0004145,1.81e-09,3;UBERON:0004872,1.12e-07,83 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.7027776305341,8.02061484040893,1.43574604915363,6.38972801596772,15.4521377329166,17.6305451379079,0.940568614814168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.86164859010704,11.2555634962123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.7027776305341,8.02061484040893,1.43574604915363,6.38972801596772,15.4521377329166,17.6305451379079,0.940568614814168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.86164859010704,11.2555634962123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:206838422..206838456,+ | |short_description=p@chr1:206838422..206838456,+ | ||
}} | }} |
Latest revision as of 02:57, 28 July 2015
Short description: | p@chr1:206838422..206838456, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:206838422..206838456, + |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 4.00e-50 | 2 |
vascular disease | 9.79e-26 | 1 |
ischemia | 9.79e-26 | 1 |
extrinsic cardiomyopathy | 9.79e-26 | 1 |
myocardial ischemia | 9.79e-26 | 1 |
myocardial infarction | 9.79e-26 | 1 |
cardiovascular system disease | 1.11e-25 | 4 |