FFCP PHASE1:Hg19::chr1:203452407..203452418,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5549 | |EntrezGene=5549 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9357 | |HGNC=9357 | ||
|TSSclassifier=strong | |||
|UniProt=Q6FHG6,Q6FG38 | |UniProt=Q6FHG6,Q6FG38 | ||
|association_with_transcript=94bp_to_CR541787,CR542270_5end | |association_with_transcript=94bp_to_CR541787,CR542270_5end | ||
|cluster_id=chr1:203452407..203452418,+ | |||
|coexpression_cluster_id=C930 | |||
|description=CAGE_peak_10_at_PRELP_5end | |description=CAGE_peak_10_at_PRELP_5end | ||
|id=chr1:203452407..203452418,+ | |id=chr1:203452407..203452418,+ | ||
|ontology_enrichment_celltype=CL:0000153!2.84e-09!9;CL:0000447!2.84e-09!9;CL:0000136!1.79e-08!15;CL:0000667!1.81e-07!6;CL:0000058!1.81e-07!6;CL:0000138!1.81e-07!6 | |ontology_enrichment_celltype=CL:0000153!2.84e-09!9;CL:0000447!2.84e-09!9;CL:0000136!1.79e-08!15;CL:0000667!1.81e-07!6;CL:0000058!1.81e-07!6;CL:0000138!1.81e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000136;2.11e-18;13!CL:0002615;1.12e-16;3!CL:0000153;5.84e-14;9!CL:0000447;5.84e-14;9!CL:0002617;4.63e-11;2!CL:0000327;2.84e-08;15!CL:0000138;3.79e-08;6!CL:0000214;9.22e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,1.49e-16,3;CL:0000136,8.34e-16,15;CL:0000153,3.67e-14,9;CL:0000447,3.67e-14,9;CL:0002617,3.69e-11,2;CL:0000327,2.17e-08,15;CL:0000058,2.89e-08,6;CL:0000138,2.89e-08,6;CL:0000214,7.53e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.66e-12;4!UBERON:0007284;1.66e-12;4!UBERON:0006965;2.50e-11;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;3.15e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,4.30e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.60e-46!115;UBERON:0004457!3.55e-10!12;UBERON:0000042!3.55e-10!12;UBERON:0001049!1.16e-08!57;UBERON:0005068!1.16e-08!57;UBERON:0006241!1.16e-08!57;UBERON:0007135!1.16e-08!57;UBERON:0003075!4.74e-08!86;UBERON:0007284!4.74e-08!86;UBERON:0002346!2.25e-07!90;UBERON:0003688!2.94e-07!6;UBERON:0002358!2.94e-07!6;UBERON:0003684!2.94e-07!6;UBERON:0001178!2.94e-07!6 | |ontology_enrichment_uberon=UBERON:0007023!9.60e-46!115;UBERON:0004457!3.55e-10!12;UBERON:0000042!3.55e-10!12;UBERON:0001049!1.16e-08!57;UBERON:0005068!1.16e-08!57;UBERON:0006241!1.16e-08!57;UBERON:0007135!1.16e-08!57;UBERON:0003075!4.74e-08!86;UBERON:0007284!4.74e-08!86;UBERON:0002346!2.25e-07!90;UBERON:0003688!2.94e-07!6;UBERON:0002358!2.94e-07!6;UBERON:0003684!2.94e-07!6;UBERON:0001178!2.94e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0003978;1.65e-16;3!UBERON:0000946;1.65e-16;3!UBERON:0004457;2.01e-14;9!UBERON:0000042;2.01e-14;9!UBERON:0002133;1.12e-11;2!UBERON:0003688;1.45e-08;6!UBERON:0002358;1.45e-08;6!UBERON:0003684;1.45e-08;6!UBERON:0001178;1.45e-08;6!UBERON:0006915;9.22e-08;3!UBERON:0007616;9.22e-08;3!UBERON:0002217;9.22e-08;3!UBERON:0002018;9.22e-08;3!UBERON:0000996;8.33e-07;1!UBERON:0002135;8.33e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,1.09e-16,3;UBERON:0009751,1.09e-16,3;UBERON:0000946,1.09e-16,3;UBERON:0002523,1.09e-16,3;UBERON:0005983,1.09e-16,3;UBERON:0002165,1.09e-16,3;UBERON:0002062,1.09e-16,3;UBERON:0007280,1.09e-16,3;UBERON:0007023,1.95e-16,114;UBERON:0002133,9.57e-12,2;UBERON:0004457,9.41e-11,12;UBERON:0000042,9.41e-11,12;UBERON:0003688,1.66e-08,6;UBERON:0002358,1.66e-08,6;UBERON:0003684,1.66e-08,6;UBERON:0001178,1.66e-08,6;UBERON:0006915,7.53e-08,3;UBERON:0007616,7.53e-08,3;UBERON:0002217,7.53e-08,3;UBERON:0002018,7.53e-08,3;UBERON:0004797,2.11e-07,7;UBERON:0004458,5.34e-07,49;UBERON:0000996,7.49e-07,1;UBERON:0002135,7.90e-07,1 | |||
|phase1_expression=1.81678379270557,2.14100523890983,3.38290569830331,2.00146596706261,5.36353313312745,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80719576192283,0.50133791063589,1.59331170856906,0.795285947051099,5.35298357332899,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0.358779271377724,0.213557388818567,0,0,0,0,0.18611685633159,0,0,0,0,0.484938170456436,0,0,0,0,0,0,0,0,0.116193942869518,0.310983165046111,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0.512556597022804,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.16661452946496,1.64647446479951,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31857361344705,0,0,0,0.23874448473769,0,0,0,0.281338832821026,0,0,0,5.37969568277888,0.828851746593443,0,0,0,0.622079175323615,0,0,0,1.97286811273867,0,0,0,0,0,0,0,2.89999830173917,0,0,0,0,0,0,0,0,0,0.110579259931225,0,1.31631238292384,0,0,1.07730361905316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0.789168805698781,0,0.30607276163049,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,1.16386819786103,0,2.93774963014692,0,0,0,0,0,2.77488893161158,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,5.58564802544508,2.97908551215189,2.87149209830726,1.19807400299395,3.004582336956,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.953423842781029,0,0,0,0,0,0,0,0.0788057072991982,0.157363764404994,0,0,0,0,0.662091970365432,0,0.542999601753713,0.864221491201268,0.326587360109409,0,0,0,0,0.439656701034247,0,0,0,0,0,1.06787412567695,0.314408610199332,1.24271716604159,0.496166021811951,0,0,0,0,0.7520696820681,1.22538230705385,1.31149052283922,0,0,0.610131324509816,0.250381861413,0.573409195690071,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.192687675289379,0,0.159633859057151,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0.795664888465099,1.27857558193737,0,0,0,0.327543835020193,0,0.0675375846183947,0,0,0,0,0,2.48105589194647,0,0,0.535701835878287,0,0,0,0,0,0,0,0.131545547125698,0,0,0.627944742804112,0.157115589916002,0,0,0,0,1.00067161847319,0,0,0,0,0,0,0,0,0,0,2.54032230114557,0,0,0,0,0,0,0.647428837187895,0.205325613712494,0,1.45713297917742,0,0,0,0,0,0,0.154348316215889,0,0,3.67722482630858,0,0.392616934229891,0.297046400327086,0.8453114551668,0.169927114687817,0.281951753939561,0.386747327841463,0,0,0,0,0,0.458729283404541,0.286679166302903,0,0.339957450954573,0.436350690340377,0,0,2.31087814315709,0.432626562123789,0,0,0.126698501011437,0,0,0,0,0.909344378618873,0.267964130156178,0,0.103432995861895,0.852935927603924,0,0.0645889098360061,0.0620747142958579,0,0.445530107947154,0,0,0,0.0673520530145875,0.932388670104793,0.665320713092027,0,0,0,0,2.34640942403454,0.855690109280065,1.22068853494722,5.99181096766961,1.00636896795513,0 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| ||
|short_description=p10@PRELP | |short_description=p10@PRELP | ||
}} | }} |
Latest revision as of 23:16, 19 September 2015
Short description: | p10@PRELP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_PRELP_5end |
Coexpression cluster: | C930_Chondrocyte_vagina_heart_Adipocyte_aorta_bladder_mature |
Association with transcript: | 94bp_to_CR541787, CR542270_5end |
EntrezGene: | PRELP |
HGNC: | 9357 |
UniProt: | Q6FHG6Q6FG38 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 1.49e-16 | 3 |
fat cell | 8.34e-16 | 15 |
GAG secreting cell | 3.67e-14 | 9 |
carbohydrate secreting cell | 3.67e-14 | 9 |
adipocyte of breast | 3.69e-11 | 2 |
extracellular matrix secreting cell | 2.17e-08 | 15 |
chondroblast | 2.89e-08 | 6 |
chondrocyte | 2.89e-08 | 6 |
synovial cell | 7.53e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
valve | 1.09e-16 | 3 |
cardiac mesenchyme | 1.09e-16 | 3 |
cardial valve | 1.09e-16 | 3 |
tunica intima | 1.09e-16 | 3 |
heart layer | 1.09e-16 | 3 |
endocardium | 1.09e-16 | 3 |
endocardial cushion | 1.09e-16 | 3 |
presumptive endocardium | 1.09e-16 | 3 |
adult organism | 1.95e-16 | 114 |
atrioventricular valve | 9.57e-12 | 2 |
cavity lining | 9.41e-11 | 12 |
serous membrane | 9.41e-11 | 12 |
omentum | 1.66e-08 | 6 |
peritoneum | 1.66e-08 | 6 |
abdominal cavity | 1.66e-08 | 6 |
visceral peritoneum | 1.66e-08 | 6 |
stratified squamous epithelium | 7.53e-08 | 3 |
layer of synovial tissue | 7.53e-08 | 3 |
synovial joint | 7.53e-08 | 3 |
synovial membrane of synovial joint | 7.53e-08 | 3 |
blood vessel layer | 2.11e-07 | 7 |
body cavity or lining | 5.34e-07 | 49 |
vagina | 7.49e-07 | 1 |
mitral valve | 7.90e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
heart disease | 4.30e-11 | 2 |