FFCP PHASE1:Hg19::chr17:37934466..37934481,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:37934466..37934481,-
|short_description=p13@IKZF3
|description=CAGE_peak_13_at_IKZF3_5end
|association_with_transcript=0bp_to_uc010wel.1_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22806 | |EntrezGene=22806 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13178 | |HGNC=13178 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc010wel.1_5end | |||
|cluster_id=chr17:37934466..37934481,- | |||
|description=CAGE_peak_13_at_IKZF3_5end | |||
|id=chr17:37934466..37934481,- | |||
|ontology_enrichment_celltype=CL:0000542!4.46e-44!53;CL:0000051!4.46e-44!53;CL:0000945!2.50e-42!24;CL:0000826!2.50e-42!24;CL:0000838!2.71e-42!52;CL:0000236!1.09e-24!14;CL:0002087!7.42e-24!119;CL:0000738!1.08e-19!140;CL:0002031!1.13e-18!124;CL:0000037!6.20e-14!172;CL:0000566!6.20e-14!172;CL:0002032!3.41e-13!165;CL:0000837!3.41e-13!165;CL:0000988!1.44e-12!182;CL:0000623!3.66e-07!3;CL:0000825!3.66e-07!3;CL:0000625!9.81e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000945;6.99e-62;24!CL:0000236;2.24e-33;13!CL:0000542;2.75e-17;53!CL:0000946;1.13e-10;1!CL:0000786;1.13e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,7.57e-62,24;CL:0000826,7.57e-62,24;CL:0000236,2.28e-40,14;CL:0000838,1.81e-27,52;CL:0000542,6.53e-27,53;CL:0000051,6.53e-27,53;CL:0002087,3.84e-11,115;CL:0000946,8.95e-11,1;CL:0000786,8.95e-11,1;CL:0000980,8.95e-11,1;CL:0002031,1.36e-10,120;CL:0000738,4.21e-09,136;CL:0002032,2.31e-07,161;CL:0000837,2.31e-07,161;CL:0000037,5.74e-07,168 | |||
|ontology_enrichment_development_v019=CL:0000051;2.75e-17;53!UBERON:0001045;2.87e-10;1 | |||
|ontology_enrichment_disease=DOID:0060058!1.03e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:630;6.73e-11;1!DOID:0050177;6.73e-11;1!DOID:0050427;6.73e-11;1!DOID:4960;7.40e-11;1!DOID:0070004;7.40e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,6.73e-11,1;DOID:0050177,6.73e-11,1;DOID:0050427,6.73e-11,1;DOID:4960,7.40e-11,1;DOID:0070004,7.40e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.42e-09!115;UBERON:0004177!3.61e-08!7;UBERON:0002106!1.04e-07!3;UBERON:0004854!1.04e-07!3;UBERON:0009034!1.04e-07!3;UBERON:0002095!1.04e-07!3;UBERON:0004782!1.04e-07!3;UBERON:0003281!1.04e-07!3;UBERON:0009664!1.04e-07!3;UBERON:0002296!1.04e-07!3;UBERON:0005602!1.04e-07!3;UBERON:0001179!1.04e-07!3;UBERON:0006293!1.04e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;2.87e-10;1!UBERON:0000029;2.87e-10;1!UBERON:0001154;2.87e-10;1!UBERON:0001153;2.87e-10;1!UBERON:0009854;2.87e-10;1!UBERON:0001961;2.87e-10;1!UBERON:0001744;2.87e-10;1!UBERON:0001042;2.87e-10;1!UBERON:0001735;2.87e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,2.50e-10,1;UBERON:0001961,2.50e-10,1;UBERON:0001744,2.50e-10,1;UBERON:0001735,2.50e-10,1;UBERON:0001154,2.74e-10,1;UBERON:0001153,2.74e-10,1;UBERON:0001045,2.74e-10,1;UBERON:0000029,3.29e-10,1 | |||
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| ||
|short_description=p13@IKZF3 | |||
}} | }} |
Latest revision as of 22:55, 19 September 2015
Short description: | p13@IKZF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_IKZF3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc010wel.1_5end |
EntrezGene: | IKZF3 |
HGNC: | 13178 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 7.57e-62 | 24 |
pro-B cell | 7.57e-62 | 24 |
B cell | 2.28e-40 | 14 |
lymphoid lineage restricted progenitor cell | 1.81e-27 | 52 |
lymphocyte | 6.53e-27 | 53 |
common lymphoid progenitor | 6.53e-27 | 53 |
nongranular leukocyte | 3.84e-11 | 115 |
antibody secreting cell | 8.95e-11 | 1 |
plasma cell | 8.95e-11 | 1 |
plasmablast | 8.95e-11 | 1 |
hematopoietic lineage restricted progenitor cell | 1.36e-10 | 120 |
leukocyte | 4.21e-09 | 136 |
hematopoietic oligopotent progenitor cell | 2.31e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.31e-07 | 161 |
hematopoietic stem cell | 5.74e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
tonsil | 2.50e-10 | 1 |
mucosa-associated lymphoid tissue | 2.50e-10 | 1 |
lymphoid tissue | 2.50e-10 | 1 |
tonsillar ring | 2.50e-10 | 1 |
vermiform appendix | 2.74e-10 | 1 |
caecum | 2.74e-10 | 1 |
midgut | 2.74e-10 | 1 |
lymph node | 3.29e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 6.73e-11 | 1 |
monogenic disease | 6.73e-11 | 1 |
xeroderma pigmentosum | 6.73e-11 | 1 |
bone marrow cancer | 7.40e-11 | 1 |
myeloma | 7.40e-11 | 1 |