FFCP PHASE1:Hg19::chr1:201330458..201330465,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7139 | |EntrezGene=7139 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11949 | |HGNC=11949 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=19bp_to_ENST00000477035_5end | |association_with_transcript=19bp_to_ENST00000477035_5end | ||
|cluster_id=chr1:201330458..201330465,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_25_at_TNNT2_5end | |description=CAGE_peak_25_at_TNNT2_5end | ||
|id=chr1:201330458..201330465,- | |id=chr1:201330458..201330465,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;2.01e-40;4!UBERON:0007284;2.01e-40;4!UBERON:0010226;2.70e-40;1!UBERON:0003104;4.71e-12;31 | |||
|ontology_enrichment_disease=DOID:114!1.17e-33!2;DOID:178!1.22e-17!1;DOID:326!1.22e-17!1;DOID:3978!1.22e-17!1;DOID:3394!1.22e-17!1;DOID:5844!1.22e-17!1;DOID:1287!2.19e-17!4 | |ontology_enrichment_disease=DOID:114!1.17e-33!2;DOID:178!1.22e-17!1;DOID:326!1.22e-17!1;DOID:3978!1.22e-17!1;DOID:3394!1.22e-17!1;DOID:5844!1.22e-17!1;DOID:1287!2.19e-17!4 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0003978;1.92e-53;3!UBERON:0000946;1.92e-53;3!UBERON:0002146;8.10e-41;1!UBERON:0005623;8.10e-41;1!UBERON:0002135;1.48e-40;1!UBERON:0002084;2.70e-40;1!UBERON:0002082;2.70e-40;1!UBERON:0007100;5.94e-26;25!UBERON:0002133;4.66e-21;2!UBERON:0000948;5.41e-17;22!UBERON:0010313;6.66e-17;10!UBERON:0004151;1.96e-14;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,2.19e-53,3;UBERON:0009751,2.19e-53,3;UBERON:0000946,2.19e-53,3;UBERON:0002523,2.19e-53,3;UBERON:0005983,2.19e-53,3;UBERON:0002165,2.19e-53,3;UBERON:0002062,2.19e-53,3;UBERON:0007280,2.19e-53,3;UBERON:0002146,9.91e-41,1;UBERON:0005623,9.91e-41,1;UBERON:0002135,1.48e-40,1;UBERON:0002084,2.21e-40,1;UBERON:0002082,2.21e-40,1;UBERON:0010226,2.21e-40,1;UBERON:0007100,4.16e-24,27;UBERON:0004797,1.28e-23,7;UBERON:0002133,4.66e-21,2;UBERON:0010313,6.93e-17,10;UBERON:0002342,6.93e-17,10;UBERON:0005062,6.93e-17,10;UBERON:0000948,1.19e-15,24;UBERON:0005498,1.19e-15,24;UBERON:0004140,1.19e-15,24;UBERON:0009881,1.19e-15,24;UBERON:0004141,1.19e-15,24;UBERON:0003084,1.19e-15,24;UBERON:0007005,1.19e-15,24;UBERON:0004139,1.19e-15,24;UBERON:0004291,1.19e-15,24;UBERON:0004151,1.83e-14,3;UBERON:0003103,5.09e-10,68 | |||
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|short_description=p25@TNNT2 | |short_description=p25@TNNT2 | ||
}} | }} |
Latest revision as of 17:22, 19 September 2015
Short description: | p25@TNNT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_TNNT2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 19bp_to_ENST00000477035_5end |
EntrezGene: | TNNT2 |
HGNC: | 11949 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
valve | 2.19e-53 | 3 |
cardiac mesenchyme | 2.19e-53 | 3 |
cardial valve | 2.19e-53 | 3 |
tunica intima | 2.19e-53 | 3 |
heart layer | 2.19e-53 | 3 |
endocardium | 2.19e-53 | 3 |
endocardial cushion | 2.19e-53 | 3 |
presumptive endocardium | 2.19e-53 | 3 |
pulmonary valve | 9.91e-41 | 1 |
semi-lunar valve | 9.91e-41 | 1 |
mitral valve | 1.48e-40 | 1 |
heart left ventricle | 2.21e-40 | 1 |
cardiac ventricle | 2.21e-40 | 1 |
future cardiac ventricle | 2.21e-40 | 1 |
primary circulatory organ | 4.16e-24 | 27 |
blood vessel layer | 1.28e-23 | 7 |
atrioventricular valve | 4.66e-21 | 2 |
neural crest-derived structure | 6.93e-17 | 10 |
neural crest | 6.93e-17 | 10 |
neural fold | 6.93e-17 | 10 |
heart | 1.19e-15 | 24 |
primitive heart tube | 1.19e-15 | 24 |
primary heart field | 1.19e-15 | 24 |
anterior lateral plate mesoderm | 1.19e-15 | 24 |
heart tube | 1.19e-15 | 24 |
heart primordium | 1.19e-15 | 24 |
cardiac mesoderm | 1.19e-15 | 24 |
cardiogenic plate | 1.19e-15 | 24 |
heart rudiment | 1.19e-15 | 24 |
cardiac chamber | 1.83e-14 | 3 |
compound organ | 5.09e-10 | 68 |