FFCP PHASE1:Hg19::chr17:37921587..37921593,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:37921587..37921593,-
|short_description=p@chr17:37921587..37921593,-
|description=CAGE_peak_at_chr17:37921587..37921593,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:37921587..37921593,- | |||
|coexpression_cluster_id=C1431 | |||
|description=CAGE_peak_at_chr17:37921587..37921593,- | |||
|id=chr17:37921587..37921593,- | |||
|ontology_enrichment_celltype=CL:0000542!7.72e-75!53;CL:0000051!7.72e-75!53;CL:0000838!1.27e-72!52;CL:0000084!2.56e-34!25;CL:0000827!2.56e-34!25;CL:0000945!9.75e-33!24;CL:0000826!9.75e-33!24;CL:0002087!8.19e-31!119;CL:0000738!1.47e-26!140;CL:0000791!1.35e-23!18;CL:0000789!1.35e-23!18;CL:0002420!1.35e-23!18;CL:0002419!1.35e-23!18;CL:0000790!1.35e-23!18;CL:0002031!2.16e-23!124;CL:0000988!3.81e-21!182;CL:0000037!5.90e-20!172;CL:0000566!5.90e-20!172;CL:0002032!2.56e-17!165;CL:0000837!2.56e-17!165;CL:0000236!7.43e-15!14;CL:0000625!9.94e-15!11;CL:0000080!9.37e-12!6;CL:0000624!6.17e-09!6;CL:0000623!3.32e-07!3;CL:0000825!3.32e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.10e-44;24!CL:0000236;5.07e-32;13!CL:0000542;7.10e-30;53!CL:0000791;3.16e-09;18!CL:0000789;3.16e-09;18!CL:0002419;3.16e-09;18!CL:0000084;3.41e-09;25!CL:0000785;2.35e-08;1!CL:0000819;2.35e-08;1!CL:0000946;5.97e-08;1!CL:0000786;5.97e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,9.83e-47,53;CL:0000051,9.83e-47,53;CL:0000945,1.20e-44,24;CL:0000826,1.20e-44,24;CL:0000838,1.02e-42,52;CL:0000236,1.27e-37,14;CL:0002087,3.17e-19,115;CL:0002031,3.21e-16,120;CL:0000738,1.13e-15,136;CL:0000785,1.68e-14,2;CL:0000955,1.68e-14,2;CL:0000818,1.68e-14,2;CL:0000954,1.68e-14,2;CL:0000816,1.68e-14,2;CL:0002032,1.22e-12,161;CL:0000837,1.22e-12,161;CL:0000037,5.92e-12,168;CL:0000988,3.78e-11,177;CL:0000817,5.74e-10,3;CL:0000791,2.73e-09,18;CL:0000789,2.73e-09,18;CL:0002420,2.73e-09,18;CL:0002419,2.73e-09,18;CL:0000790,2.73e-09,18;CL:0000084,3.47e-09,25;CL:0000827,3.47e-09,25;CL:0000819,2.19e-08,1;CL:0000946,8.12e-08,1;CL:0000786,8.12e-08,1;CL:0000980,8.12e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000051;7.10e-30;53!CL:0000954;1.32e-14;2!CL:0000790;3.16e-09;18 | |||
|ontology_enrichment_disease=DOID:0060058!1.16e-18!10;DOID:2531!2.64e-08!51;DOID:0060083!2.64e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:12603;1.90e-08;1!DOID:0060073;2.35e-08;1!DOID:8675;2.35e-08;1!DOID:4960;5.97e-08;1!DOID:0070004;5.97e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,1.91e-08,1;DOID:0060073,2.19e-08,1;DOID:8675,2.19e-08,1;DOID:4960,5.79e-08,1;DOID:0070004,5.79e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!9.74e-13!7;UBERON:0000178!7.00e-12!15;UBERON:0000179!7.00e-12!15;UBERON:0000463!7.00e-12!15;UBERON:0002370!5.19e-08!4;UBERON:0005058!5.19e-08!4;UBERON:0009113!5.19e-08!4;UBERON:0003295!5.19e-08!4;UBERON:0005562!5.19e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;5.97e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,2.90e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993374274723366,0.738905305049512,1.49550484495991,0,0.383829398097213,0,0,0,0,1.31694240986513,0.995184627411951,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18455444504853,0,0.426730222566507,1.60158394814405,1.72425731986345,1.32208974556972,0,1.1384259382189,2.93618594685469,1.91136614062614,0,0,0,0.196709770113833,1.57204305099666,0.616804496998528,0.334372990781356,0,1.4203434172042,0,0.445641827540694,2.3568472597987,0.886135578334485,1.35401931882508,5.89220070738106,4.29195846947598,0.493313713811028,0.276350017785848,0.579606171470105,0.444859689486181,0.535081656179426,1.04535523804977,0,0.766440987203842,1.03088233644789,1.01207876807801,0.95569624297229,0.651083453856419,0.950452044448374,0,0.639933055772092,0,1.18388626022008,2.46338399076314,0.403213486449465,1.87208137048455,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0.985153801009636,0.862510299438069,0.77005821767849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13929437434833,0.476463550915578,0.411362273086194,0,0,1.58625035258854,0,0,0,3.15865397713722,0,0.284567373393656,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0.16480387422676,0,0,0.276283915531148,0,0,0.615424027305347,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0.0915975934018623,0,1.02193298195737,0,0.498635045700469,0,0,0,0,0,0,0.652931232636591,0,0,0,0,0,0.889563386041866,0.494255755786011,0.522109747527277,0,0,0,2.55436704901932,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,1.9846640872478,0.790446527591777,1.46151118057075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,1.37771983728653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.469919589899268,0.0644578879735772,0.699588091474503,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322944549180031,0.186224142887574,0,0,0,0,0,0.134704106029175,0,0,0.0814032686109745,0.320182037633146,0,0,0,0,0,0,0.603821380773079,0.961705476909699 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| ||
|short_description=p@chr17:37921587..37921593,- | |||
}} | }} |
Latest revision as of 16:13, 25 July 2015
Short description: | p@chr17:37921587..37921593, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:37921587..37921593, - |
Coexpression cluster: | C1431_CD4_Burkitt_CD8_diffuse_tonsil_spleen_lymphoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 9.83e-47 | 53 |
common lymphoid progenitor | 9.83e-47 | 53 |
lymphocyte of B lineage | 1.20e-44 | 24 |
pro-B cell | 1.20e-44 | 24 |
lymphoid lineage restricted progenitor cell | 1.02e-42 | 52 |
B cell | 1.27e-37 | 14 |
nongranular leukocyte | 3.17e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 3.21e-16 | 120 |
leukocyte | 1.13e-15 | 136 |
mature B cell | 1.68e-14 | 2 |
pre-B-II cell | 1.68e-14 | 2 |
transitional stage B cell | 1.68e-14 | 2 |
small pre-B-II cell | 1.68e-14 | 2 |
immature B cell | 1.68e-14 | 2 |
hematopoietic oligopotent progenitor cell | 1.22e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.22e-12 | 161 |
hematopoietic stem cell | 5.92e-12 | 168 |
hematopoietic cell | 3.78e-11 | 177 |
precursor B cell | 5.74e-10 | 3 |
mature alpha-beta T cell | 2.73e-09 | 18 |
alpha-beta T cell | 2.73e-09 | 18 |
immature T cell | 2.73e-09 | 18 |
mature T cell | 2.73e-09 | 18 |
immature alpha-beta T cell | 2.73e-09 | 18 |
T cell | 3.47e-09 | 25 |
pro-T cell | 3.47e-09 | 25 |
B-1 B cell | 2.19e-08 | 1 |
antibody secreting cell | 8.12e-08 | 1 |
plasma cell | 8.12e-08 | 1 |
plasmablast | 8.12e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
lymph node | 2.90e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 1.91e-08 | 1 |
lymphatic system cancer | 2.19e-08 | 1 |
lymphosarcoma | 2.19e-08 | 1 |
bone marrow cancer | 5.79e-08 | 1 |
myeloma | 5.79e-08 | 1 |