FFCP PHASE1:Hg19::chr1:118148662..118148681,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54855 | |EntrezGene=54855 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24712 | |HGNC=24712 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VWP2 | |UniProt=Q5VWP2 | ||
|association_with_transcript=58bp_to_NM_017709,uc001ehe.2_5end | |association_with_transcript=58bp_to_NM_017709,uc001ehe.2_5end | ||
|cluster_id=chr1:118148662..118148681,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_1_at_FAM46C_5end | |description=CAGE_peak_1_at_FAM46C_5end | ||
|id=chr1:118148662..118148681,+ | |id=chr1:118148662..118148681,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.15e-31!172;CL:0000566!1.15e-31!172;CL:0002032!9.14e-29!165;CL:0000837!9.14e-29!165;CL:0000988!1.58e-27!182;CL:0000738!2.16e-22!140;CL:0002031!8.19e-18!124;CL:0000542!9.09e-17!53;CL:0000051!9.09e-17!53;CL:0002087!9.12e-17!119;CL:0000838!1.62e-16!52;CL:0000763!6.53e-13!112;CL:0000049!6.53e-13!112;CL:0000084!1.07e-11!25;CL:0000827!1.07e-11!25;CL:0000791!7.75e-10!18;CL:0000789!7.75e-10!18;CL:0002420!7.75e-10!18;CL:0002419!7.75e-10!18;CL:0000790!7.75e-10!18;CL:0000236!3.15e-08!14 | |ontology_enrichment_celltype=CL:0000037!1.15e-31!172;CL:0000566!1.15e-31!172;CL:0002032!9.14e-29!165;CL:0000837!9.14e-29!165;CL:0000988!1.58e-27!182;CL:0000738!2.16e-22!140;CL:0002031!8.19e-18!124;CL:0000542!9.09e-17!53;CL:0000051!9.09e-17!53;CL:0002087!9.12e-17!119;CL:0000838!1.62e-16!52;CL:0000763!6.53e-13!112;CL:0000049!6.53e-13!112;CL:0000084!1.07e-11!25;CL:0000827!1.07e-11!25;CL:0000791!7.75e-10!18;CL:0000789!7.75e-10!18;CL:0002420!7.75e-10!18;CL:0002419!7.75e-10!18;CL:0000790!7.75e-10!18;CL:0000236!3.15e-08!14 | ||
|ontology_enrichment_celltype_v019=CL:0000084;4.47e-12;25!CL:0000542;4.98e-11;53!CL:0000791;3.76e-10;18!CL:0000789;3.76e-10;18!CL:0002419;3.76e-10;18!CL:0000236;2.49e-08;13!CL:0000860;1.49e-07;33!CL:0002057;1.49e-07;33!CL:0002087;3.33e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.25e-32,168;CL:0002032,2.24e-29,161;CL:0000837,2.24e-29,161;CL:0000988,2.04e-28,177;CL:0000738,6.15e-23,136;CL:0002031,2.06e-18,120;CL:0000542,2.38e-17,53;CL:0000051,2.38e-17,53;CL:0002087,2.51e-17,115;CL:0000838,4.32e-17,52;CL:0000763,5.66e-13,108;CL:0000049,5.66e-13,108;CL:0000084,4.61e-12,25;CL:0000827,4.61e-12,25;CL:0000791,3.88e-10,18;CL:0000789,3.88e-10,18;CL:0002420,3.88e-10,18;CL:0002419,3.88e-10,18;CL:0000790,3.88e-10,18;CL:0000236,1.80e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000051;4.98e-11;53!CL:0000790;3.76e-10;18 | |||
|ontology_enrichment_disease=DOID:2531!1.36e-08!51;DOID:0060083!1.36e-08!51;DOID:1240!4.06e-08!39 | |ontology_enrichment_disease=DOID:2531!1.36e-08!51;DOID:0060083!1.36e-08!51;DOID:1240!4.06e-08!39 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.09e-08,51;DOID:0060083,2.09e-08,51;DOID:1240,4.20e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.22e-10!115;UBERON:0002390!1.65e-07!102;UBERON:0003061!1.65e-07!102;UBERON:0000178!7.96e-07!15;UBERON:0000179!7.96e-07!15;UBERON:0000463!7.96e-07!15 | |ontology_enrichment_uberon=UBERON:0007023!1.22e-10!115;UBERON:0002390!1.65e-07!102;UBERON:0003061!1.65e-07!102;UBERON:0000178!7.96e-07!15;UBERON:0000179!7.96e-07!15;UBERON:0000463!7.96e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.87e-07;15!UBERON:0000179;6.87e-07;15!UBERON:0000463;6.87e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.22e-10,114;UBERON:0002390,9.71e-08,98;UBERON:0003061,9.71e-08,98;UBERON:0000178,7.44e-07,15;UBERON:0000179,7.44e-07,15;UBERON:0000463,7.44e-07,15 | |||
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| ||
|short_description=p1@FAM46C | |short_description=p1@FAM46C | ||
}} | }} |
Latest revision as of 10:31, 16 September 2015
Short description: | p1@FAM46C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM46C_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 58bp_to_NM_017709, uc001ehe.2_5end |
EntrezGene: | FAM46C |
HGNC: | 24712 |
UniProt: | Q5VWP2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.25e-32 | 168 |
hematopoietic oligopotent progenitor cell | 2.24e-29 | 161 |
hematopoietic multipotent progenitor cell | 2.24e-29 | 161 |
hematopoietic cell | 2.04e-28 | 177 |
leukocyte | 6.15e-23 | 136 |
hematopoietic lineage restricted progenitor cell | 2.06e-18 | 120 |
lymphocyte | 2.38e-17 | 53 |
common lymphoid progenitor | 2.38e-17 | 53 |
nongranular leukocyte | 2.51e-17 | 115 |
lymphoid lineage restricted progenitor cell | 4.32e-17 | 52 |
myeloid cell | 5.66e-13 | 108 |
common myeloid progenitor | 5.66e-13 | 108 |
T cell | 4.61e-12 | 25 |
pro-T cell | 4.61e-12 | 25 |
mature alpha-beta T cell | 3.88e-10 | 18 |
alpha-beta T cell | 3.88e-10 | 18 |
immature T cell | 3.88e-10 | 18 |
mature T cell | 3.88e-10 | 18 |
immature alpha-beta T cell | 3.88e-10 | 18 |
B cell | 1.80e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.22e-10 | 114 |
hematopoietic system | 9.71e-08 | 98 |
blood island | 9.71e-08 | 98 |
blood | 7.44e-07 | 15 |
haemolymphatic fluid | 7.44e-07 | 15 |
organism substance | 7.44e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.09e-08 | 51 |
immune system cancer | 2.09e-08 | 51 |
leukemia | 4.20e-08 | 39 |