FFCP PHASE1:Hg19::chr19:54711626..54711656,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6203 | |EntrezGene=6203 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=10442 | |HGNC=10442 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-111bp_to_BC020462_5end | |association_with_transcript=-111bp_to_BC020462_5end | ||
|cluster_id=chr19:54711626..54711656,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_8_at_RPS9_5end | |description=CAGE_peak_8_at_RPS9_5end | ||
|id=chr19:54711626..54711656,- | |id=chr19:54711626..54711656,- | ||
|ontology_enrichment_celltype=CL:0002057!1.04e-74!42;CL:0000860!4.45e-69!45;CL:0000766!7.27e-68!76;CL:0000557!4.42e-56!71;CL:0000839!7.20e-54!70;CL:0002009!8.70e-53!65;CL:0002194!1.60e-51!63;CL:0000576!1.60e-51!63;CL:0000040!1.60e-51!63;CL:0000559!1.60e-51!63;CL:0000763!5.94e-47!112;CL:0000049!5.94e-47!112;CL:0000738!1.11e-44!140;CL:0000037!1.21e-35!172;CL:0000566!1.21e-35!172;CL:0000988!5.65e-33!182;CL:0002087!6.20e-33!119;CL:0002031!6.38e-33!124;CL:0002032!1.03e-32!165;CL:0000837!1.03e-32!165;CL:0002393!3.35e-15!9;CL:0002397!3.35e-15!9;CL:0000094!1.59e-13!8;CL:0000134!1.79e-10!358;CL:0002320!4.93e-10!365;CL:0000081!1.28e-09!11;CL:0000842!5.38e-09!3;CL:0000219!1.69e-08!390;CL:0000771!1.00e-07!2;CL:0000048!3.14e-07!430;CL:0000034!3.73e-07!444;CL:0000723!5.81e-07!436;CL:0000224!7.63e-07!4 | |ontology_enrichment_celltype=CL:0002057!1.04e-74!42;CL:0000860!4.45e-69!45;CL:0000766!7.27e-68!76;CL:0000557!4.42e-56!71;CL:0000839!7.20e-54!70;CL:0002009!8.70e-53!65;CL:0002194!1.60e-51!63;CL:0000576!1.60e-51!63;CL:0000040!1.60e-51!63;CL:0000559!1.60e-51!63;CL:0000763!5.94e-47!112;CL:0000049!5.94e-47!112;CL:0000738!1.11e-44!140;CL:0000037!1.21e-35!172;CL:0000566!1.21e-35!172;CL:0000988!5.65e-33!182;CL:0002087!6.20e-33!119;CL:0002031!6.38e-33!124;CL:0002032!1.03e-32!165;CL:0000837!1.03e-32!165;CL:0002393!3.35e-15!9;CL:0002397!3.35e-15!9;CL:0000094!1.59e-13!8;CL:0000134!1.79e-10!358;CL:0002320!4.93e-10!365;CL:0000081!1.28e-09!11;CL:0000842!5.38e-09!3;CL:0000219!1.69e-08!390;CL:0000771!1.00e-07!2;CL:0000048!3.14e-07!430;CL:0000034!3.73e-07!444;CL:0000723!5.81e-07!436;CL:0000224!7.63e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.78e-59;33!CL:0002057;5.78e-59;33!CL:0000473;7.43e-42;39!CL:0000234;7.43e-42;39!CL:0000576;2.35e-35;48!CL:0000766;2.34e-25;69!CL:0000771;1.82e-14;2!CL:0000094;2.30e-13;8!CL:0000763;6.47e-13;100!CL:0002087;2.07e-12;104!CL:0002393;6.38e-10;6!CL:0002397;6.38e-10;6!CL:0000081;9.49e-10;11!CL:0000775;1.53e-09;3!CL:0000738;6.35e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.81e-68,42;CL:0002057,2.81e-68,42;CL:0000473,3.33e-59,48;CL:0000234,3.33e-59,48;CL:0000766,6.91e-54,72;CL:0002009,3.76e-49,61;CL:0002194,1.71e-46,59;CL:0000576,1.71e-46,59;CL:0000040,1.71e-46,59;CL:0000559,1.71e-46,59;CL:0000557,2.04e-44,67;CL:0000839,3.52e-41,66;CL:0000763,2.24e-37,108;CL:0000049,2.24e-37,108;CL:0000738,1.40e-33,136;CL:0002087,1.74e-26,115;CL:0000037,3.08e-26,168;CL:0002032,1.67e-25,161;CL:0000837,1.67e-25,161;CL:0002031,3.31e-25,120;CL:0000988,1.20e-24,177;CL:0000771,1.82e-14,2;CL:0000094,2.30e-13,8;CL:0000081,9.49e-10,11;CL:0000134,1.13e-09,354;CL:0000775,1.53e-09,3;CL:0002320,2.21e-09,361;CL:0000219,2.40e-08,386;CL:0000048,4.46e-07,427;CL:0000723,6.68e-07,433;CL:0002393,9.08e-07,9;CL:0002397,9.08e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;6.87e-49;42!CL:0000049;8.63e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.02e-62!102;UBERON:0003061!2.02e-62!102;UBERON:0002193!9.50e-56!112;UBERON:0002371!1.25e-48!80;UBERON:0001474!1.60e-44!86;UBERON:0004765!2.25e-36!101;UBERON:0001434!2.25e-36!101;UBERON:0002405!3.48e-34!115;UBERON:0003081!7.03e-28!216;UBERON:0002204!3.98e-19!167;UBERON:0000178!4.57e-14!15;UBERON:0000179!4.57e-14!15;UBERON:0000463!4.57e-14!15;UBERON:0002384!1.95e-09!375;UBERON:0000926!2.81e-07!448;UBERON:0004120!2.81e-07!448;UBERON:0006603!2.81e-07!448 | |ontology_enrichment_uberon=UBERON:0002390!2.02e-62!102;UBERON:0003061!2.02e-62!102;UBERON:0002193!9.50e-56!112;UBERON:0002371!1.25e-48!80;UBERON:0001474!1.60e-44!86;UBERON:0004765!2.25e-36!101;UBERON:0001434!2.25e-36!101;UBERON:0002405!3.48e-34!115;UBERON:0003081!7.03e-28!216;UBERON:0002204!3.98e-19!167;UBERON:0000178!4.57e-14!15;UBERON:0000179!4.57e-14!15;UBERON:0000463!4.57e-14!15;UBERON:0002384!1.95e-09!375;UBERON:0000926!2.81e-07!448;UBERON:0004120!2.81e-07!448;UBERON:0006603!2.81e-07!448 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.55e-41,98;UBERON:0003061,4.55e-41,98;UBERON:0002371,1.07e-38,76;UBERON:0002193,7.63e-37,108;UBERON:0001474,1.43e-35,82;UBERON:0004765,4.81e-32,90;UBERON:0002405,7.08e-31,93;UBERON:0001434,2.03e-28,100;UBERON:0003081,2.53e-17,203;UBERON:0002204,3.00e-15,167;UBERON:0000926,2.44e-09,315;UBERON:0004120,2.44e-09,315;UBERON:0006603,2.44e-09,315;UBERON:0002384,5.57e-09,371 | |||
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| ||
|short_description=p8@RPS9 | |short_description=p8@RPS9 | ||
}} | }} |
Latest revision as of 21:34, 19 September 2015
Short description: | p8@RPS9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_RPS9_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -111bp_to_BC020462_5end |
EntrezGene: | RPS9 |
HGNC: | 10442 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.55e-41 | 98 |
blood island | 4.55e-41 | 98 |
bone marrow | 1.07e-38 | 76 |
hemolymphoid system | 7.63e-37 | 108 |
bone element | 1.43e-35 | 82 |
skeletal element | 4.81e-32 | 90 |
immune system | 7.08e-31 | 93 |
skeletal system | 2.03e-28 | 100 |
lateral plate mesoderm | 2.53e-17 | 203 |
musculoskeletal system | 3.00e-15 | 167 |
mesoderm | 2.44e-09 | 315 |
mesoderm-derived structure | 2.44e-09 | 315 |
presumptive mesoderm | 2.44e-09 | 315 |
connective tissue | 5.57e-09 | 371 |