FFCP PHASE1:Hg19::chr19:41848208..41848225,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7040 | |EntrezGene=7040 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11766 | |HGNC=11766 | ||
|TSSclassifier=strong | |||
|UniProt=P01137 | |UniProt=P01137 | ||
|association_with_transcript=-395bp_to_M38449_5end | |association_with_transcript=-395bp_to_M38449_5end | ||
|cluster_id=chr19:41848208..41848225,- | |||
|coexpression_cluster_id=C2236 | |||
|description=CAGE_peak_18_at_TGFB1_5end | |description=CAGE_peak_18_at_TGFB1_5end | ||
|id=chr19:41848208..41848225,- | |id=chr19:41848208..41848225,- | ||
|ontology_enrichment_celltype=CL:0000738!9.24e-58!140;CL:0000037!8.95e-53!172;CL:0000566!8.95e-53!172;CL:0002032!6.45e-52!165;CL:0000837!6.45e-52!165;CL:0002031!8.51e-50!124;CL:0000988!3.70e-48!182;CL:0002087!2.24e-47!119;CL:0002057!5.09e-46!42;CL:0000766!5.47e-43!76;CL:0000860!6.11e-42!45;CL:0000839!1.71e-33!70;CL:0000763!2.57e-33!112;CL:0000049!2.57e-33!112;CL:0000557!2.33e-31!71;CL:0002194!7.19e-28!63;CL:0000576!7.19e-28!63;CL:0000040!7.19e-28!63;CL:0000559!7.19e-28!63;CL:0002009!1.41e-26!65;CL:0000791!8.40e-19!18;CL:0000789!8.40e-19!18;CL:0002420!8.40e-19!18;CL:0002419!8.40e-19!18;CL:0000790!8.40e-19!18;CL:0000838!1.45e-16!52;CL:0000542!4.58e-16!53;CL:0000051!4.58e-16!53;CL:0000084!1.92e-15!25;CL:0000827!1.92e-15!25;CL:0000625!5.21e-14!11;CL:0002393!1.59e-12!9;CL:0002397!1.59e-12!9;CL:0000094!5.19e-12!8;CL:0000134!1.73e-10!358;CL:0002320!8.12e-10!365;CL:0000081!3.75e-08!11;CL:0002274!5.42e-08!5;CL:0000457!5.42e-08!5;CL:0002191!5.42e-08!5;CL:0000097!5.42e-08!5;CL:0000831!5.42e-08!5;CL:0002028!5.42e-08!5;CL:0000219!7.13e-08!390;CL:0000624!7.52e-08!6 | |ontology_enrichment_celltype=CL:0000738!9.24e-58!140;CL:0000037!8.95e-53!172;CL:0000566!8.95e-53!172;CL:0002032!6.45e-52!165;CL:0000837!6.45e-52!165;CL:0002031!8.51e-50!124;CL:0000988!3.70e-48!182;CL:0002087!2.24e-47!119;CL:0002057!5.09e-46!42;CL:0000766!5.47e-43!76;CL:0000860!6.11e-42!45;CL:0000839!1.71e-33!70;CL:0000763!2.57e-33!112;CL:0000049!2.57e-33!112;CL:0000557!2.33e-31!71;CL:0002194!7.19e-28!63;CL:0000576!7.19e-28!63;CL:0000040!7.19e-28!63;CL:0000559!7.19e-28!63;CL:0002009!1.41e-26!65;CL:0000791!8.40e-19!18;CL:0000789!8.40e-19!18;CL:0002420!8.40e-19!18;CL:0002419!8.40e-19!18;CL:0000790!8.40e-19!18;CL:0000838!1.45e-16!52;CL:0000542!4.58e-16!53;CL:0000051!4.58e-16!53;CL:0000084!1.92e-15!25;CL:0000827!1.92e-15!25;CL:0000625!5.21e-14!11;CL:0002393!1.59e-12!9;CL:0002397!1.59e-12!9;CL:0000094!5.19e-12!8;CL:0000134!1.73e-10!358;CL:0002320!8.12e-10!365;CL:0000081!3.75e-08!11;CL:0002274!5.42e-08!5;CL:0000457!5.42e-08!5;CL:0002191!5.42e-08!5;CL:0000097!5.42e-08!5;CL:0000831!5.42e-08!5;CL:0002028!5.42e-08!5;CL:0000219!7.13e-08!390;CL:0000624!7.52e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.04e-29;33!CL:0002057;1.04e-29;33!CL:0000766;3.28e-26;69!CL:0000576;2.72e-25;48!CL:0000473;1.54e-20;39!CL:0000234;1.54e-20;39!CL:0000094;2.10e-18;8!CL:0002087;3.45e-16;104!CL:0000791;2.14e-15;18!CL:0000789;2.14e-15;18!CL:0002419;2.14e-15;18!CL:0000763;3.12e-13;100!CL:0000081;6.37e-13;11!CL:0000738;1.73e-12;136!CL:0000084;2.58e-12;25!CL:0000625;2.88e-12;11!CL:0000097;1.25e-11;5!CL:0000236;2.38e-09;13!CL:0000988;5.28e-09;177!CL:0002393;7.88e-09;6!CL:0002397;7.88e-09;6!CL:0000775;1.27e-08;3!CL:0000875;1.33e-08;3!CL:0002396;1.33e-08;3!CL:0000542;2.56e-08;53!CL:0000219;3.26e-07;193!CL:0000767;4.09e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.29e-59,136;CL:0000766,5.63e-53,72;CL:0002032,3.41e-49,161;CL:0000837,3.41e-49,161;CL:0002031,6.22e-49,120;CL:0000037,3.17e-48,168;CL:0000860,4.86e-48,42;CL:0002057,4.86e-48,42;CL:0000988,7.51e-45,177;CL:0002087,2.22e-43,115;CL:0000473,8.78e-41,48;CL:0000234,8.78e-41,48;CL:0000839,2.71e-37,66;CL:0000557,1.40e-36,67;CL:0000763,2.33e-34,108;CL:0000049,2.33e-34,108;CL:0002194,1.17e-30,59;CL:0000576,1.17e-30,59;CL:0000040,1.17e-30,59;CL:0000559,1.17e-30,59;CL:0002009,2.36e-29,61;CL:0000094,2.78e-18,8;CL:0002393,9.98e-16,9;CL:0002397,9.98e-16,9;CL:0000791,1.44e-15,18;CL:0000789,1.44e-15,18;CL:0002420,1.44e-15,18;CL:0002419,1.44e-15,18;CL:0000790,1.44e-15,18;CL:0000134,1.62e-13,354;CL:0000838,2.64e-13,52;CL:0000542,6.00e-13,53;CL:0000051,6.00e-13,53;CL:0002320,6.36e-13,361;CL:0000081,7.76e-13,11;CL:0000084,2.02e-12,25;CL:0000827,2.02e-12,25;CL:0000625,2.53e-12,11;CL:0000097,7.42e-12,5;CL:0002028,7.42e-12,5;CL:0000219,7.62e-11,386;CL:0000236,1.10e-08,14;CL:0000875,1.29e-08,3;CL:0000775,1.29e-08,3;CL:0002396,1.29e-08,3;CL:0000048,2.39e-08,427;CL:0000723,5.21e-08,433;CL:0000034,1.42e-07,441;CL:0000767,5.41e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.36e-35;42!CL:0000790;2.14e-15;18!CL:0000049;4.77e-11;108!CL:0000051;2.56e-08;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.13e-37!102;UBERON:0003061!1.13e-37!102;UBERON:0002193!4.04e-35!112;UBERON:0002371!4.78e-26!80;UBERON:0001474!3.82e-23!86;UBERON:0002405!7.87e-21!115;UBERON:0004765!1.80e-17!101;UBERON:0001434!1.80e-17!101;UBERON:0003081!9.43e-10!216;UBERON:0000178!1.95e-09!15;UBERON:0000179!1.95e-09!15;UBERON:0000463!1.95e-09!15;UBERON:0002384!6.47e-09!375 | |ontology_enrichment_uberon=UBERON:0002390!1.13e-37!102;UBERON:0003061!1.13e-37!102;UBERON:0002193!4.04e-35!112;UBERON:0002371!4.78e-26!80;UBERON:0001474!3.82e-23!86;UBERON:0002405!7.87e-21!115;UBERON:0004765!1.80e-17!101;UBERON:0001434!1.80e-17!101;UBERON:0003081!9.43e-10!216;UBERON:0000178!1.95e-09!15;UBERON:0000179!1.95e-09!15;UBERON:0000463!1.95e-09!15;UBERON:0002384!6.47e-09!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.69e-11;15!UBERON:0000179;9.69e-11;15!UBERON:0000463;9.69e-11;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.86e-41,98;UBERON:0003061,9.86e-41,98;UBERON:0002193,1.49e-37,108;UBERON:0002371,5.42e-31,76;UBERON:0002405,3.02e-28,93;UBERON:0001474,5.97e-28,82;UBERON:0004765,1.57e-24,90;UBERON:0001434,4.91e-21,100;UBERON:0003081,6.86e-13,203;UBERON:0002384,4.09e-12,371;UBERON:0000178,1.37e-10,15;UBERON:0000179,1.37e-10,15;UBERON:0000463,1.37e-10,15;UBERON:0002204,1.07e-08,167 | |||
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|short_description=p18@TGFB1 | |short_description=p18@TGFB1 | ||
}} | }} |
Latest revision as of 05:06, 18 September 2015
Short description: | p18@TGFB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_TGFB1_5end |
Coexpression cluster: | C2236_Eosinophils_Neutrophils_CD14CD16_CD14_Mast_Whole_CD19 |
Association with transcript: | -395bp_to_M38449_5end |
EntrezGene: | TGFB1 |
HGNC: | 11766 |
UniProt: | P01137 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.86e-41 | 98 |
blood island | 9.86e-41 | 98 |
hemolymphoid system | 1.49e-37 | 108 |
bone marrow | 5.42e-31 | 76 |
immune system | 3.02e-28 | 93 |
bone element | 5.97e-28 | 82 |
skeletal element | 1.57e-24 | 90 |
skeletal system | 4.91e-21 | 100 |
lateral plate mesoderm | 6.86e-13 | 203 |
connective tissue | 4.09e-12 | 371 |
blood | 1.37e-10 | 15 |
haemolymphatic fluid | 1.37e-10 | 15 |
organism substance | 1.37e-10 | 15 |
musculoskeletal system | 1.07e-08 | 167 |