FFCP PHASE1:Hg19::chr19:39892910..39892923,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:39892910..39892923,+ | |||
|coexpression_cluster_id=C593 | |||
|description=CAGE_peak_at_chr19:39892910..39892923,+ | |description=CAGE_peak_at_chr19:39892910..39892923,+ | ||
|id=chr19:39892910..39892923,+ | |id=chr19:39892910..39892923,+ | ||
|ontology_enrichment_celltype=CL:0000624!2.83e-24!6;CL:0000738!1.24e-22!140;CL:0000084!2.21e-17!25;CL:0000827!2.21e-17!25;CL:0000791!4.46e-17!18;CL:0000789!4.46e-17!18;CL:0002420!4.46e-17!18;CL:0002419!4.46e-17!18;CL:0000790!4.46e-17!18;CL:0000037!5.81e-17!172;CL:0000566!5.81e-17!172;CL:0000988!1.33e-15!182;CL:0002031!6.00e-15!124;CL:0000838!4.66e-14!52;CL:0000542!1.00e-13!53;CL:0000051!1.00e-13!53;CL:0000623!2.93e-13!3;CL:0000825!2.93e-13!3;CL:0000784!3.59e-13!3;CL:0002087!4.69e-13!119;CL:0002032!6.34e-13!165;CL:0000837!6.34e-13!165;CL:0000898!1.01e-12!3;CL:0000767!1.61e-12!3;CL:0000815!3.29e-09!2;CL:0000792!3.29e-09!2;CL:0002677!3.29e-09!2;CL:0002274!2.53e-07!5;CL:0000457!2.53e-07!5;CL:0002191!2.53e-07!5;CL:0000097!2.53e-07!5;CL:0000831!2.53e-07!5;CL:0002028!2.53e-07!5 | |ontology_enrichment_celltype=CL:0000624!2.83e-24!6;CL:0000738!1.24e-22!140;CL:0000084!2.21e-17!25;CL:0000827!2.21e-17!25;CL:0000791!4.46e-17!18;CL:0000789!4.46e-17!18;CL:0002420!4.46e-17!18;CL:0002419!4.46e-17!18;CL:0000790!4.46e-17!18;CL:0000037!5.81e-17!172;CL:0000566!5.81e-17!172;CL:0000988!1.33e-15!182;CL:0002031!6.00e-15!124;CL:0000838!4.66e-14!52;CL:0000542!1.00e-13!53;CL:0000051!1.00e-13!53;CL:0000623!2.93e-13!3;CL:0000825!2.93e-13!3;CL:0000784!3.59e-13!3;CL:0002087!4.69e-13!119;CL:0002032!6.34e-13!165;CL:0000837!6.34e-13!165;CL:0000898!1.01e-12!3;CL:0000767!1.61e-12!3;CL:0000815!3.29e-09!2;CL:0000792!3.29e-09!2;CL:0002677!3.29e-09!2;CL:0002274!2.53e-07!5;CL:0000457!2.53e-07!5;CL:0002191!2.53e-07!5;CL:0000097!2.53e-07!5;CL:0000831!2.53e-07!5;CL:0002028!2.53e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000624;3.38e-51;6!CL:0000791;2.38e-43;18!CL:0000789;2.38e-43;18!CL:0002419;2.38e-43;18!CL:0000623;5.75e-38;3!CL:0000784;7.40e-38;3!CL:0000084;4.85e-31;25!CL:0000815;1.85e-25;2!CL:0000792;1.85e-25;2!CL:0002677;1.85e-25;2!CL:0000898;2.49e-17;3!CL:0000542;1.05e-13;53!CL:0000625;5.60e-11;11!CL:0000451;8.25e-11;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.90e-51,6;CL:0000791,1.71e-43,18;CL:0000789,1.71e-43,18;CL:0002420,1.71e-43,18;CL:0002419,1.71e-43,18;CL:0000790,1.71e-43,18;CL:0000623,5.08e-38,3;CL:0000825,5.08e-38,3;CL:0000784,9.54e-38,3;CL:0000084,3.82e-31,25;CL:0000827,3.82e-31,25;CL:0000838,1.06e-27,52;CL:0000542,3.74e-27,53;CL:0000051,3.74e-27,53;CL:0000815,2.37e-25,2;CL:0000792,2.37e-25,2;CL:0002677,2.37e-25,2;CL:0000738,1.69e-21,136;CL:0000898,2.95e-17,3;CL:0000037,4.19e-17,168;CL:0002087,1.50e-16,115;CL:0000988,3.76e-16,177;CL:0002031,8.45e-16,120;CL:0002032,2.37e-13,161;CL:0000837,2.37e-13,161;CL:0000625,5.51e-11,11;CL:0000451,8.83e-11,10;CL:0000134,3.77e-07,354;CL:0002320,5.67e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000790;2.38e-43;18!CL:0000051;1.05e-13;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.92e-07,371 | |||
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|short_description=p@chr19:39892910..39892923,+ | |short_description=p@chr19:39892910..39892923,+ | ||
}} | }} |
Latest revision as of 07:34, 26 July 2015
Short description: | p@chr19:39892910..39892923, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:39892910..39892923, + |
Coexpression cluster: | C593_Dendritic_CD8_Natural_CD4_CD19_Basophils_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 1.90e-51 | 6 |
mature alpha-beta T cell | 1.71e-43 | 18 |
alpha-beta T cell | 1.71e-43 | 18 |
immature T cell | 1.71e-43 | 18 |
mature T cell | 1.71e-43 | 18 |
immature alpha-beta T cell | 1.71e-43 | 18 |
natural killer cell | 5.08e-38 | 3 |
pro-NK cell | 5.08e-38 | 3 |
plasmacytoid dendritic cell | 9.54e-38 | 3 |
T cell | 3.82e-31 | 25 |
pro-T cell | 3.82e-31 | 25 |
lymphoid lineage restricted progenitor cell | 1.06e-27 | 52 |
lymphocyte | 3.74e-27 | 53 |
common lymphoid progenitor | 3.74e-27 | 53 |
regulatory T cell | 2.37e-25 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.37e-25 | 2 |
naive regulatory T cell | 2.37e-25 | 2 |
leukocyte | 1.69e-21 | 136 |
naive T cell | 2.95e-17 | 3 |
hematopoietic stem cell | 4.19e-17 | 168 |
nongranular leukocyte | 1.50e-16 | 115 |
hematopoietic cell | 3.76e-16 | 177 |
hematopoietic lineage restricted progenitor cell | 8.45e-16 | 120 |
hematopoietic oligopotent progenitor cell | 2.37e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.37e-13 | 161 |
CD8-positive, alpha-beta T cell | 5.51e-11 | 11 |
dendritic cell | 8.83e-11 | 10 |
mesenchymal cell | 3.77e-07 | 354 |
connective tissue cell | 5.67e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 9.92e-07 | 371 |