FFCP PHASE1:Hg19::chr19:36593048..36593060,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:36593048..36593060,+ | |||
|description=CAGE_peak_at_chr19:36593048..36593060,+ | |description=CAGE_peak_at_chr19:36593048..36593060,+ | ||
|id=chr19:36593048..36593060,+ | |id=chr19:36593048..36593060,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.75e-08!180;CL:0000548!4.92e-08!679;CL:0000004!4.92e-08!679;CL:0000255!4.92e-08!679;CL:0000012!1.03e-07!682 | |ontology_enrichment_celltype=CL:0000055!2.75e-08!180;CL:0000548!4.92e-08!679;CL:0000004!4.92e-08!679;CL:0000255!4.92e-08!679;CL:0000012!1.03e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0002577;8.50e-10;3!CL:0000511;1.00e-07;1!CL:0002625;1.00e-07;1!CL:0002553;1.00e-07;1!CL:0000216;1.00e-07;1!CL:0002601;1.00e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,5.74e-10,3;CL:0002601,5.33e-08,1;CL:0000511,6.10e-08,1;CL:0002625,6.10e-08,1;CL:0000216,6.10e-08,1;CL:0002553,6.52e-08,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001136;1.00e-07;1!UBERON:0001343;1.00e-07;1!UBERON:0004910;1.00e-07;1!UBERON:0004813;1.00e-07;1!UBERON:0001987;1.49e-07;4!UBERON:0003891;2.58e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,6.10e-08,1;UBERON:0001343,6.10e-08,1;UBERON:0004910,6.10e-08,1;UBERON:0005154,6.10e-08,1;UBERON:0005295,6.10e-08,1;UBERON:0004813,6.10e-08,1;UBERON:0005297,6.10e-08,1;UBERON:0005294,6.10e-08,1;UBERON:0010141,6.10e-08,1;UBERON:0005891,6.10e-08,1;UBERON:0001987,1.11e-07,4;UBERON:0004340,1.11e-07,4;UBERON:0004872,1.59e-07,83;UBERON:0003891,3.44e-07,4 | |||
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| ||
|short_description=p@chr19:36593048..36593060,+ | |short_description=p@chr19:36593048..36593060,+ | ||
}} | }} |
Latest revision as of 07:00, 26 July 2015
Short description: | p@chr19:36593048..36593060, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:36593048..36593060, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 5.74e-10 | 3 |
uterine smooth muscle cell | 5.33e-08 | 1 |
androgen binding protein secreting cell | 6.10e-08 | 1 |
seminiferous tubule epithelial cell | 6.10e-08 | 1 |
Sertoli cell | 6.10e-08 | 1 |
lung fibroblast | 6.52e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 6.10e-08 | 1 |
seminiferous tubule of testis | 6.10e-08 | 1 |
epithelium of male gonad | 6.10e-08 | 1 |
epithelial cord | 6.10e-08 | 1 |
sex cord | 6.10e-08 | 1 |
seminiferous tubule epithelium | 6.10e-08 | 1 |
testis sex cord | 6.10e-08 | 1 |
genital ridge | 6.10e-08 | 1 |
primitive sex cord of indifferent gonad | 6.10e-08 | 1 |
coelomic epithelium | 6.10e-08 | 1 |
placenta | 1.11e-07 | 4 |
allantois | 1.11e-07 | 4 |
splanchnic layer of lateral plate mesoderm | 1.59e-07 | 83 |
stroma | 3.44e-07 | 4 |