FFCP PHASE1:Hg19::chr19:35485440..35485460,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57655 | |EntrezGene=57655 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29305 | |HGNC=29305 | ||
|TSSclassifier=strong | |||
|UniProt=F5GZ02 | |UniProt=F5GZ02 | ||
|association_with_transcript=-227bp_to_ENST00000453966,uc002nxi.1_5end | |association_with_transcript=-227bp_to_ENST00000453966,uc002nxi.1_5end | ||
|cluster_id=chr19:35485440..35485460,+ | |||
|coexpression_cluster_id=C80 | |||
|description=CAGE_peak_13_at_GRAMD1A_5end | |description=CAGE_peak_13_at_GRAMD1A_5end | ||
|id=chr19:35485440..35485460,+ | |id=chr19:35485440..35485460,+ | ||
|ontology_enrichment_celltype=CL:0000453!4.52e-59!5;CL:0000990!7.36e-47!8;CL:0000451!2.57e-38!10;CL:0001014!3.44e-25!2;CL:0001016!3.44e-25!2;CL:0000840!1.45e-18!5;CL:0001029!1.45e-18!5;CL:0000767!1.49e-16!3;CL:0000988!1.08e-10!182;CL:0000738!2.21e-10!140;CL:0002032!3.29e-10!165;CL:0000837!3.29e-10!165;CL:0000037!1.01e-09!172;CL:0000566!1.01e-09!172;CL:0000763!3.99e-09!112;CL:0000049!3.99e-09!112;CL:0000094!9.11e-07!8 | |ontology_enrichment_celltype=CL:0000453!4.52e-59!5;CL:0000990!7.36e-47!8;CL:0000451!2.57e-38!10;CL:0001014!3.44e-25!2;CL:0001016!3.44e-25!2;CL:0000840!1.45e-18!5;CL:0001029!1.45e-18!5;CL:0000767!1.49e-16!3;CL:0000988!1.08e-10!182;CL:0000738!2.21e-10!140;CL:0002032!3.29e-10!165;CL:0000837!3.29e-10!165;CL:0000037!1.01e-09!172;CL:0000566!1.01e-09!172;CL:0000763!3.99e-09!112;CL:0000049!3.99e-09!112;CL:0000094!9.11e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0001014;1.05e-79;2!CL:0001016;1.05e-79;2!CL:0000453;2.24e-71;5!CL:0000990;3.55e-40;8!CL:0000451;4.54e-33;10!CL:0000840;1.82e-27;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.05e-79,2;CL:0001016,1.05e-79,2;CL:0000453,2.52e-71,5;CL:0000990,3.80e-40,8;CL:0000451,4.79e-33,10;CL:0000840,1.82e-27,5;CL:0001029,1.82e-27,5 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.70e-40;1!UBERON:0003056;1.96e-14;3 | |||
|ontology_enrichment_disease=DOID:9119!4.23e-13!1;DOID:0060060!5.38e-13!1;DOID:0060061!5.38e-13!1;DOID:8691!5.38e-13!1 | |ontology_enrichment_disease=DOID:9119!4.23e-13!1;DOID:0060060!5.38e-13!1;DOID:0060061!5.38e-13!1;DOID:8691!5.38e-13!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000941!2.32e-13!1;UBERON:0004904!2.32e-13!1;UBERON:0002464!2.32e-13!1;UBERON:0001021!2.32e-13!1;UBERON:0001785!2.32e-13!1;UBERON:0003714!2.58e-07!2;UBERON:0005162!2.58e-07!2;UBERON:0000122!2.58e-07!2;UBERON:0001875!4.42e-07!2;UBERON:0006514!4.42e-07!2 | |ontology_enrichment_uberon=UBERON:0000941!2.32e-13!1;UBERON:0004904!2.32e-13!1;UBERON:0002464!2.32e-13!1;UBERON:0001021!2.32e-13!1;UBERON:0001785!2.32e-13!1;UBERON:0003714!2.58e-07!2;UBERON:0005162!2.58e-07!2;UBERON:0000122!2.58e-07!2;UBERON:0001875!4.42e-07!2;UBERON:0006514!4.42e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.70e-40;1!UBERON:0001785;2.70e-40;1!UBERON:0002464;2.70e-40;1!UBERON:0004904;2.70e-40;1!UBERON:0001021;2.70e-40;1!UBERON:0003714;6.30e-21;2!UBERON:0005162;6.30e-21;2!UBERON:0000122;6.30e-21;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.21e-40,1;UBERON:0001785,2.21e-40,1;UBERON:0002464,2.21e-40,1;UBERON:0004904,2.21e-40,1;UBERON:0001021,2.21e-40,1;UBERON:0003902,2.21e-40,1;UBERON:0005425,2.21e-40,1;UBERON:0003714,5.70e-21,2;UBERON:0005162,5.70e-21,2;UBERON:0000122,5.70e-21,2;UBERON:0001781,3.42e-11,4;UBERON:0000966,6.78e-08,6;UBERON:0005388,6.78e-08,6;UBERON:0001802,6.78e-08,6 | |||
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|short_description=p13@GRAMD1A | |short_description=p13@GRAMD1A | ||
}} | }} |
Latest revision as of 09:02, 17 September 2015
Short description: | p13@GRAMD1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_GRAMD1A_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | -227bp_to_ENST00000453966, uc002nxi.1_5end |
EntrezGene: | GRAMD1A |
HGNC: | 29305 |
UniProt: | F5GZ02 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.05e-79 | 2 |
immature CD1a-positive Langerhans cell | 1.05e-79 | 2 |
Langerhans cell | 2.52e-71 | 5 |
conventional dendritic cell | 3.80e-40 | 8 |
dendritic cell | 4.79e-33 | 10 |
immature conventional dendritic cell | 1.82e-27 | 5 |
common dendritic progenitor | 1.82e-27 | 5 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.21e-40 | 1 |
cranial nerve | 2.21e-40 | 1 |
nerve trunk | 2.21e-40 | 1 |
nerve connecting eye with brain | 2.21e-40 | 1 |
nerve | 2.21e-40 | 1 |
retinal neural layer | 2.21e-40 | 1 |
presumptive neural retina | 2.21e-40 | 1 |
neural tissue | 5.70e-21 | 2 |
multi cell component structure | 5.70e-21 | 2 |
neuron projection bundle | 5.70e-21 | 2 |
layer of retina | 3.42e-11 | 4 |
retina | 6.78e-08 | 6 |
photoreceptor array | 6.78e-08 | 6 |
posterior segment of eyeball | 6.78e-08 | 6 |