FFCP PHASE1:Hg19::chrX:9880892..9880918,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=357 | |EntrezGene=357 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=630 | |HGNC=630 | ||
|TSSclassifier=strong | |||
|UniProt=C9IZC6,B3KU73 | |UniProt=C9IZC6,B3KU73 | ||
|association_with_transcript=169bp_to_ENST00000452575,ENST00000540923,uc004csw.1_5end | |association_with_transcript=169bp_to_ENST00000452575,ENST00000540923,uc004csw.1_5end | ||
|cluster_id=chrX:9880892..9880918,+ | |||
|coexpression_cluster_id=C74 | |||
|description=CAGE_peak_9_at_SHROOM2_5end | |description=CAGE_peak_9_at_SHROOM2_5end | ||
|id=chrX:9880892..9880918,+ | |id=chrX:9880892..9880918,+ | ||
|ontology_enrichment_celltype=CL:0002605!2.87e-08!3 | |ontology_enrichment_celltype=CL:0002605!2.87e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000047;3.02e-11;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006238;3.62e-08;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002021;4.12e-36;5!UBERON:0002902;4.22e-21;1!UBERON:0009899;4.22e-21;1!UBERON:0007190;4.22e-21;1!UBERON:0001950;1.84e-15;20!UBERON:0002619;3.74e-14;22!UBERON:0001869;2.39e-13;32!UBERON:0000956;1.44e-12;25!UBERON:0000203;1.44e-12;25!UBERON:0001893;1.83e-11;34!UBERON:0002791;2.55e-09;32!UBERON:0000955;5.15e-09;68!UBERON:0002780;2.87e-08;41!UBERON:0001890;2.87e-08;41!UBERON:0002106;4.52e-08;3!UBERON:0003528;8.00e-08;34!UBERON:0002020;8.00e-08;34!UBERON:0001017;6.61e-07;75 | |||
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| ||
|short_description=p9@SHROOM2 | |short_description=p9@SHROOM2 | ||
}} | }} |
Latest revision as of 15:43, 16 September 2015
Short description: | p9@SHROOM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SHROOM2_5end |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | 169bp_to_ENST00000452575, ENST00000540923, uc004csw.1_5end |
EntrezGene: | SHROOM2 |
HGNC: | 630 |
UniProt: | C9IZC6B3KU73 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data