FFCP PHASE1:Hg19::chr19:18197706..18197712,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3594 | |EntrezGene=3594 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5971 | |HGNC=5971 | ||
|TSSclassifier=strong | |||
|UniProt=P42701 | |UniProt=P42701 | ||
|association_with_transcript=-9bp_to_ENST00000322153,ENST00000430026,NM_005535,NM_153701_5end | |association_with_transcript=-9bp_to_ENST00000322153,ENST00000430026,NM_005535,NM_153701_5end | ||
|cluster_id=chr19:18197706..18197712,- | |||
|description=CAGE_peak_4_at_IL12RB1_5end | |description=CAGE_peak_4_at_IL12RB1_5end | ||
|id=chr19:18197706..18197712,- | |id=chr19:18197706..18197712,- | ||
|ontology_enrichment_celltype=CL:0002087!3.35e-25!119;CL:0000084!3.08e-23!25;CL:0000827!3.08e-23!25;CL:0000738!4.70e-23!140;CL:0000791!1.01e-20!18;CL:0000789!1.01e-20!18;CL:0002420!1.01e-20!18;CL:0002419!1.01e-20!18;CL:0000790!1.01e-20!18;CL:0002031!7.79e-20!124;CL:0000838!1.35e-18!52;CL:0000542!4.15e-18!53;CL:0000051!4.15e-18!53;CL:0000037!3.77e-17!172;CL:0000566!3.77e-17!172;CL:0002032!1.77e-15!165;CL:0000837!1.77e-15!165;CL:0000988!1.82e-15!182;CL:0000625!5.93e-15!11;CL:0002057!2.84e-08!42;CL:0000623!4.11e-08!3;CL:0000825!4.11e-08!3;CL:0002393!1.45e-07!9;CL:0002397!1.45e-07!9;CL:0000860!1.80e-07!45;CL:0000842!5.70e-07!3;CL:0000766!6.04e-07!76 | |ontology_enrichment_celltype=CL:0002087!3.35e-25!119;CL:0000084!3.08e-23!25;CL:0000827!3.08e-23!25;CL:0000738!4.70e-23!140;CL:0000791!1.01e-20!18;CL:0000789!1.01e-20!18;CL:0002420!1.01e-20!18;CL:0002419!1.01e-20!18;CL:0000790!1.01e-20!18;CL:0002031!7.79e-20!124;CL:0000838!1.35e-18!52;CL:0000542!4.15e-18!53;CL:0000051!4.15e-18!53;CL:0000037!3.77e-17!172;CL:0000566!3.77e-17!172;CL:0002032!1.77e-15!165;CL:0000837!1.77e-15!165;CL:0000988!1.82e-15!182;CL:0000625!5.93e-15!11;CL:0002057!2.84e-08!42;CL:0000623!4.11e-08!3;CL:0000825!4.11e-08!3;CL:0002393!1.45e-07!9;CL:0002397!1.45e-07!9;CL:0000860!1.80e-07!45;CL:0000842!5.70e-07!3;CL:0000766!6.04e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000623;1.47e-33;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,2.45e-34,3;CL:0000825,2.45e-34,3;CL:0000838,2.74e-07,52;CL:0000542,3.83e-07,53;CL:0000051,3.83e-07,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!4.68e-13!7;UBERON:0002390!2.53e-12!102;UBERON:0003061!2.53e-12!102;UBERON:0002193!2.27e-11!112;UBERON:0002370!3.18e-08!4;UBERON:0005058!3.18e-08!4;UBERON:0009113!3.18e-08!4;UBERON:0003295!3.18e-08!4;UBERON:0005562!3.18e-08!4;UBERON:0003408!9.09e-07!10 | |ontology_enrichment_uberon=UBERON:0004177!4.68e-13!7;UBERON:0002390!2.53e-12!102;UBERON:0003061!2.53e-12!102;UBERON:0002193!2.27e-11!112;UBERON:0002370!3.18e-08!4;UBERON:0005058!3.18e-08!4;UBERON:0009113!3.18e-08!4;UBERON:0003295!3.18e-08!4;UBERON:0005562!3.18e-08!4;UBERON:0003408!9.09e-07!10 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0.393364276848904,0,0.464448369948228,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0.434021741431704,0.447830948479849,0,0.257575567634187,0,0.377875943688809,0.242584061187816,0,0,0.619412741790207,0,0.256160706529101,0.236482229888585,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0.426224750532694,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0.632924774881769,0.211255286311942,0.212604299965044,0.419317291016752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983548850569165,0,0.616804496998528,0.334372990781356,0,0.473447805734733,0,1.00269411196656,0.294605907474837,1.32920336750173,1.08321545506006,3.71464827204458,2.47112760363769,2.30213066445147,1.38175008892924,1.15921234294021,0.741432815810302,0.267540828089713,1.04535523804977,0.566546713487831,0.766440987203842,1.03088233644789,0.253019692019503,0.318565414324097,0,0,0.602300476311091,0.76791966692651,1.24930726552346,0.710331756132051,0.821127996921047,1.00803371612366,0.534880391567015,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,1.37921532141349,1.94064817373566,1.66845947163673,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,1.17400313583789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0,0.476463550915578,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0.16480387422676,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0.136203406111576,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0.790446527591777,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.861074898304078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,0,0,0,0,0,0,0.375935671919414,0.322289439867886,0.199882311849858,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0.213233981900981,0,0.193766729508018,0.31037357147929,0,0.0636471582781649,0,0,0,0.336760265072938,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0.393364276848904,0,0.464448369948228,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0.434021741431704,0.447830948479849,0,0.257575567634187,0,0.377875943688809,0.242584061187816,0,0,0.619412741790207,0,0.256160706529101,0.236482229888585,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0.426224750532694,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0.632924774881769,0.211255286311942,0.212604299965044,0.419317291016752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983548850569165,0,0.616804496998528,0.334372990781356,0,0.473447805734733,0,1.00269411196656,0.294605907474837,1.32920336750173,1.08321545506006,3.71464827204458,2.47112760363769,2.30213066445147,1.38175008892924,1.15921234294021,0.741432815810302,0.267540828089713,1.04535523804977,0.566546713487831,0.766440987203842,1.03088233644789,0.253019692019503,0.318565414324097,0,0,0.602300476311091,0.76791966692651,1.24930726552346,0.710331756132051,0.821127996921047,1.00803371612366,0.534880391567015,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,1.37921532141349,1.94064817373566,1.66845947163673,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,1.17400313583789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0,0.476463550915578,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0.16480387422676,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0.136203406111576,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0.790446527591777,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.861074898304078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,0,0,0,0,0,0,0.375935671919414,0.322289439867886,0.199882311849858,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0.213233981900981,0,0.193766729508018,0.31037357147929,0,0.0636471582781649,0,0,0,0.336760265072938,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p4@IL12RB1 | |short_description=p4@IL12RB1 | ||
}} | }} |
Latest revision as of 13:41, 16 September 2015
Short description: | p4@IL12RB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_IL12RB1_5end |
Coexpression cluster: | NA |
Association with transcript: | -9bp_to_ENST00000322153, ENST00000430026, NM_005535, NM_153701_5end |
EntrezGene: | IL12RB1 |
HGNC: | 5971 |
UniProt: | P42701 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 2.45e-34 | 3 |
pro-NK cell | 2.45e-34 | 3 |
lymphoid lineage restricted progenitor cell | 2.74e-07 | 52 |
lymphocyte | 3.83e-07 | 53 |
common lymphoid progenitor | 3.83e-07 | 53 |