FFCP PHASE1:Hg19::chr17:34207354..34207372,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:34207354..34207372,-
|short_description=p1@CCL5
|description=CAGE_peak_1_at_CCL5_5end
|association_with_transcript=4bp_to_NM_002985,uc002hkf.2_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6352 | |EntrezGene=6352 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10632 | |HGNC=10632 | ||
|TSSclassifier=strong | |||
|UniProt=D0EI67,P13501 | |UniProt=D0EI67,P13501 | ||
|association_with_transcript=4bp_to_NM_002985,uc002hkf.2_5end | |||
|cluster_id=chr17:34207354..34207372,- | |||
|coexpression_cluster_id=C1776 | |||
|description=CAGE_peak_1_at_CCL5_5end | |||
|id=chr17:34207354..34207372,- | |||
|ontology_enrichment_celltype=CL:0000037!4.49e-33!172;CL:0000566!4.49e-33!172;CL:0002032!5.69e-32!165;CL:0000837!5.69e-32!165;CL:0000988!1.05e-31!182;CL:0000738!3.19e-31!140;CL:0002087!7.59e-30!119;CL:0002031!1.93e-25!124;CL:0000763!2.95e-19!112;CL:0000049!2.95e-19!112;CL:0000766!2.22e-18!76;CL:0002194!2.46e-16!63;CL:0000576!2.46e-16!63;CL:0000040!2.46e-16!63;CL:0000559!2.46e-16!63;CL:0002009!1.75e-15!65;CL:0000839!1.76e-14!70;CL:0000557!3.55e-13!71;CL:0002057!4.65e-12!42;CL:0000542!6.90e-12!53;CL:0000051!6.90e-12!53;CL:0000838!8.41e-12!52;CL:0000860!1.14e-11!45;CL:0000791!1.66e-10!18;CL:0000789!1.66e-10!18;CL:0002420!1.66e-10!18;CL:0002419!1.66e-10!18;CL:0000790!1.66e-10!18;CL:0000625!9.76e-09!11;CL:0000084!2.23e-07!25;CL:0000827!2.23e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.37e-12;33!CL:0002057;5.37e-12;33!CL:0000473;5.41e-12;39!CL:0000234;5.41e-12;39!CL:0000791;5.30e-11;18!CL:0000789;5.30e-11;18!CL:0002419;5.30e-11;18!CL:0002087;9.89e-10;104!CL:0000625;3.24e-09;11!CL:0000576;5.99e-09;48!CL:0000084;4.38e-08;25!CL:0000738;2.30e-07;136!CL:0000766;2.57e-07;69!CL:0000542;3.86e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.32e-33,168;CL:0002032,2.63e-32,161;CL:0000837,2.63e-32,161;CL:0000738,2.75e-32,136;CL:0000988,3.49e-32,177;CL:0002087,2.60e-31,115;CL:0002031,5.05e-26,120;CL:0000763,1.60e-18,108;CL:0000049,1.60e-18,108;CL:0000766,6.29e-18,72;CL:0002194,1.76e-16,59;CL:0000576,1.76e-16,59;CL:0000040,1.76e-16,59;CL:0000559,1.76e-16,59;CL:0002009,1.04e-15,61;CL:0000839,7.41e-14,66;CL:0000473,1.96e-13,48;CL:0000234,1.96e-13,48;CL:0000542,4.68e-13,53;CL:0000051,4.68e-13,53;CL:0000838,5.74e-13,52;CL:0000557,9.32e-13,67;CL:0000860,2.34e-11,42;CL:0002057,2.34e-11,42;CL:0000791,4.26e-11,18;CL:0000789,4.26e-11,18;CL:0002420,4.26e-11,18;CL:0002419,4.26e-11,18;CL:0000790,4.26e-11,18;CL:0000625,3.28e-09,11;CL:0000084,3.79e-08,25;CL:0000827,3.79e-08,25 | |||
|ontology_enrichment_development_v019=CL:0000790;5.30e-11;18!CL:0002057;6.76e-09;42!CL:0000051;3.86e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.66e-22!112;UBERON:0002390!1.24e-21!102;UBERON:0003061!1.24e-21!102;UBERON:0007023!8.90e-14!115;UBERON:0002371!1.68e-11!80;UBERON:0000178!9.75e-11!15;UBERON:0000179!9.75e-11!15;UBERON:0000463!9.75e-11!15;UBERON:0002405!1.04e-10!115;UBERON:0001474!1.37e-09!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.38e-11;15!UBERON:0000179;2.38e-11;15!UBERON:0000463;2.38e-11;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.57e-21,108;UBERON:0002390,3.78e-21,98;UBERON:0003061,3.78e-21,98;UBERON:0007023,1.43e-14,114;UBERON:0002405,1.69e-13,93;UBERON:0000178,2.43e-11,15;UBERON:0000179,2.43e-11,15;UBERON:0000463,2.43e-11,15;UBERON:0002371,1.18e-10,76;UBERON:0001474,5.47e-09,82 | |||
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| ||
|short_description=p1@CCL5 | |||
}} | }} |
Latest revision as of 15:56, 19 September 2015
Short description: | p1@CCL5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCL5_5end |
Coexpression cluster: | C1776_embryonic_CD8_Natural_Whole_NK_blood_Basophils |
Association with transcript: | 4bp_to_NM_002985, uc002hkf.2_5end |
EntrezGene: | CCL5 |
HGNC: | 10632 |
UniProt: | D0EI67P13501 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.57e-21 | 108 |
hematopoietic system | 3.78e-21 | 98 |
blood island | 3.78e-21 | 98 |
adult organism | 1.43e-14 | 114 |
immune system | 1.69e-13 | 93 |
blood | 2.43e-11 | 15 |
haemolymphatic fluid | 2.43e-11 | 15 |
organism substance | 2.43e-11 | 15 |
bone marrow | 1.18e-10 | 76 |
bone element | 5.47e-09 | 82 |