FFCP PHASE1:Hg19::chr18:61575200..61575230,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5273 | |EntrezGene=5273 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8942 | |HGNC=8942 | ||
|TSSclassifier=strong | |||
|UniProt=P48595 | |UniProt=P48595 | ||
|association_with_transcript=0bp_to_ENST00000238508_5end | |association_with_transcript=0bp_to_ENST00000238508_5end | ||
|cluster_id=chr18:61575200..61575230,+ | |||
|description=CAGE_peak_1_at_SERPINB10_5end | |description=CAGE_peak_1_at_SERPINB10_5end | ||
|id=chr18:61575200..61575230,+ | |id=chr18:61575200..61575230,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.05e-39!42;CL:0000860!7.63e-38!45;CL:0000763!6.38e-33!112;CL:0000049!6.38e-33!112;CL:0002194!1.99e-30!63;CL:0000576!1.99e-30!63;CL:0000040!1.99e-30!63;CL:0000559!1.99e-30!63;CL:0000766!4.97e-30!76;CL:0000037!9.08e-30!172;CL:0000566!9.08e-30!172;CL:0002009!5.00e-29!65;CL:0000839!8.75e-29!70;CL:0000988!1.49e-28!182;CL:0000557!7.10e-27!71;CL:0002032!7.86e-27!165;CL:0000837!7.86e-27!165;CL:0000738!1.33e-25!140;CL:0002087!8.56e-23!119;CL:0002031!3.14e-20!124 | |ontology_enrichment_celltype=CL:0002057!1.05e-39!42;CL:0000860!7.63e-38!45;CL:0000763!6.38e-33!112;CL:0000049!6.38e-33!112;CL:0002194!1.99e-30!63;CL:0000576!1.99e-30!63;CL:0000040!1.99e-30!63;CL:0000559!1.99e-30!63;CL:0000766!4.97e-30!76;CL:0000037!9.08e-30!172;CL:0000566!9.08e-30!172;CL:0002009!5.00e-29!65;CL:0000839!8.75e-29!70;CL:0000988!1.49e-28!182;CL:0000557!7.10e-27!71;CL:0002032!7.86e-27!165;CL:0000837!7.86e-27!165;CL:0000738!1.33e-25!140;CL:0002087!8.56e-23!119;CL:0002031!3.14e-20!124 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.18e-64;33!CL:0002057;2.18e-64;33!CL:0000473;2.78e-44;39!CL:0000234;2.78e-44;39!CL:0000576;2.70e-40;48!CL:0000766;5.94e-26;69!CL:0000763;1.80e-16;100!CL:0002087;1.28e-11;104!CL:0000738;6.10e-10;136!CL:0000988;1.00e-07;177!CL:0000767;3.15e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.16e-64,42;CL:0002057,2.16e-64,42;CL:0000473,6.09e-55,48;CL:0000234,6.09e-55,48;CL:0000763,3.75e-52,108;CL:0000049,3.75e-52,108;CL:0000766,1.84e-51,72;CL:0002194,1.27e-50,59;CL:0000576,1.27e-50,59;CL:0000040,1.27e-50,59;CL:0000559,1.27e-50,59;CL:0002009,1.33e-48,61;CL:0000839,1.91e-46,66;CL:0000557,8.39e-46,67;CL:0000037,4.96e-42,168;CL:0002032,3.91e-41,161;CL:0000837,3.91e-41,161;CL:0000988,4.96e-39,177;CL:0000738,4.86e-38,136;CL:0002087,5.58e-33,115;CL:0002031,5.36e-31,120;CL:0000134,2.84e-11,354;CL:0002320,9.42e-11,361;CL:0000219,6.19e-09,386;CL:0000767,3.68e-07,3;CL:0000034,4.82e-07,441;CL:0000723,6.47e-07,433;CL:0000048,9.13e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;1.00e-46;42!CL:0000049;2.16e-16;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.06e-32!102;UBERON:0003061!7.06e-32!102;UBERON:0002193!2.21e-28!112;UBERON:0002371!1.25e-23!80;UBERON:0001474!6.35e-21!86;UBERON:0002405!3.92e-17!115;UBERON:0004765!1.20e-15!101;UBERON:0001434!1.20e-15!101;UBERON:0003081!1.61e-09!216;UBERON:0000178!2.56e-07!15;UBERON:0000179!2.56e-07!15;UBERON:0000463!2.56e-07!15 | |ontology_enrichment_uberon=UBERON:0002390!7.06e-32!102;UBERON:0003061!7.06e-32!102;UBERON:0002193!2.21e-28!112;UBERON:0002371!1.25e-23!80;UBERON:0001474!6.35e-21!86;UBERON:0002405!3.92e-17!115;UBERON:0004765!1.20e-15!101;UBERON:0001434!1.20e-15!101;UBERON:0003081!1.61e-09!216;UBERON:0000178!2.56e-07!15;UBERON:0000179!2.56e-07!15;UBERON:0000463!2.56e-07!15 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.81e-41,76;UBERON:0002390,3.18e-40,98;UBERON:0003061,3.18e-40,98;UBERON:0001474,1.40e-37,82;UBERON:0002405,1.83e-35,93;UBERON:0002193,2.79e-35,108;UBERON:0004765,3.35e-33,90;UBERON:0001434,1.02e-28,100;UBERON:0003081,2.80e-15,203;UBERON:0002204,1.44e-13,167;UBERON:0002384,4.81e-10,371 | |||
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|short_description=p1@SERPINB10 | |short_description=p1@SERPINB10 | ||
}} | }} |
Latest revision as of 05:04, 20 September 2015
Short description: | p1@SERPINB10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SERPINB10_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000238508_5end |
EntrezGene: | SERPINB10 |
HGNC: | 8942 |
UniProt: | P48595 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.16e-64 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.16e-64 | 42 |
defensive cell | 6.09e-55 | 48 |
phagocyte | 6.09e-55 | 48 |
myeloid cell | 3.75e-52 | 108 |
common myeloid progenitor | 3.75e-52 | 108 |
myeloid leukocyte | 1.84e-51 | 72 |
monopoietic cell | 1.27e-50 | 59 |
monocyte | 1.27e-50 | 59 |
monoblast | 1.27e-50 | 59 |
promonocyte | 1.27e-50 | 59 |
macrophage dendritic cell progenitor | 1.33e-48 | 61 |
myeloid lineage restricted progenitor cell | 1.91e-46 | 66 |
granulocyte monocyte progenitor cell | 8.39e-46 | 67 |
hematopoietic stem cell | 4.96e-42 | 168 |
hematopoietic oligopotent progenitor cell | 3.91e-41 | 161 |
hematopoietic multipotent progenitor cell | 3.91e-41 | 161 |
hematopoietic cell | 4.96e-39 | 177 |
leukocyte | 4.86e-38 | 136 |
nongranular leukocyte | 5.58e-33 | 115 |
hematopoietic lineage restricted progenitor cell | 5.36e-31 | 120 |
mesenchymal cell | 2.84e-11 | 354 |
connective tissue cell | 9.42e-11 | 361 |
motile cell | 6.19e-09 | 386 |
basophil | 3.68e-07 | 3 |
stem cell | 4.82e-07 | 441 |
somatic stem cell | 6.47e-07 | 433 |
multi fate stem cell | 9.13e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.81e-41 | 76 |
hematopoietic system | 3.18e-40 | 98 |
blood island | 3.18e-40 | 98 |
bone element | 1.40e-37 | 82 |
immune system | 1.83e-35 | 93 |
hemolymphoid system | 2.79e-35 | 108 |
skeletal element | 3.35e-33 | 90 |
skeletal system | 1.02e-28 | 100 |
lateral plate mesoderm | 2.80e-15 | 203 |
musculoskeletal system | 1.44e-13 | 167 |
connective tissue | 4.81e-10 | 371 |