FFCP PHASE1:Hg19::chr18:61265362..61265366,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:61265362..61265366,+ | |||
|coexpression_cluster_id=C820 | |||
|description=CAGE_peak_at_chr18:61265362..61265366,+ | |description=CAGE_peak_at_chr18:61265362..61265366,+ | ||
|id=chr18:61265362..61265366,+ | |id=chr18:61265362..61265366,+ | ||
|ontology_enrichment_celltype=CL:0002076!2.80e-27!43;CL:0000223!3.08e-20!59;CL:0002251!1.85e-17!21;CL:0002159!1.22e-13!13;CL:0000066!2.04e-13!254;CL:0002368!2.28e-13!13;CL:0000622!7.60e-10!5;CL:0002623!9.41e-10!3;CL:0002166!1.23e-09!3;CL:0000068!1.61e-09!3;CL:0000069!1.61e-09!3;CL:0000307!1.61e-09!3;CL:0000377!1.61e-09!3;CL:0002621!6.83e-09!3;CL:0000076!1.25e-08!62;CL:0002202!3.26e-08!9;CL:0002632!3.26e-08!9;CL:0000154!3.33e-08!6;CL:0000244!8.73e-08!4;CL:0000731!8.73e-08!4;CL:0000575!3.66e-07!2 | |ontology_enrichment_celltype=CL:0002076!2.80e-27!43;CL:0000223!3.08e-20!59;CL:0002251!1.85e-17!21;CL:0002159!1.22e-13!13;CL:0000066!2.04e-13!254;CL:0002368!2.28e-13!13;CL:0000622!7.60e-10!5;CL:0002623!9.41e-10!3;CL:0002166!1.23e-09!3;CL:0000068!1.61e-09!3;CL:0000069!1.61e-09!3;CL:0000307!1.61e-09!3;CL:0000377!1.61e-09!3;CL:0002621!6.83e-09!3;CL:0000076!1.25e-08!62;CL:0002202!3.26e-08!9;CL:0002632!3.26e-08!9;CL:0000154!3.33e-08!6;CL:0000244!8.73e-08!4;CL:0000731!8.73e-08!4;CL:0000575!3.66e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000244;8.00e-08;4!CL:0000731;8.00e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,8.71e-08,4;CL:0000731,8.71e-08,4;CL:0002076,6.35e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0009143;2.52e-08;1 | |||
|ontology_enrichment_disease=DOID:1749!4.39e-20!14 | |ontology_enrichment_disease=DOID:1749!4.39e-20!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;9.88e-17;14!DOID:3151;1.77e-08;1!DOID:3149;1.77e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,8.73e-17,14;DOID:3151,1.77e-08,1;DOID:3149,1.77e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0000166!3.09e-21!21;UBERON:0001004!9.18e-21!72;UBERON:0000165!1.19e-17!28;UBERON:0000930!1.19e-17!28;UBERON:0000161!1.39e-15!35;UBERON:0003729!1.18e-14!5;UBERON:0004119!2.34e-12!169;UBERON:0000925!2.34e-12!169;UBERON:0006595!2.34e-12!169;UBERON:0003343!3.90e-12!4;UBERON:0004785!3.90e-12!4;UBERON:0001444!4.77e-12!48;UBERON:0000065!6.24e-12!53;UBERON:0003102!1.07e-10!95;UBERON:0003126!1.19e-10!7;UBERON:0001005!1.19e-10!7;UBERON:0001723!2.25e-10!3;UBERON:0001033!2.25e-10!3;UBERON:0010056!2.25e-10!3;UBERON:0000974!4.09e-10!10;UBERON:0007196!9.50e-10!14;UBERON:0001558!9.50e-10!14;UBERON:0006562!1.39e-09!11;UBERON:0001949!6.83e-09!3;UBERON:0001007!1.69e-08!155;UBERON:0001555!1.69e-08!155;UBERON:0007026!1.69e-08!155;UBERON:0000344!2.24e-08!12;UBERON:0000072!3.94e-08!46;UBERON:0000078!1.46e-07!18;UBERON:0001042!1.59e-07!10;UBERON:0009145!1.59e-07!10;UBERON:0001708!2.55e-07!4;UBERON:0001704!2.55e-07!4;UBERON:0003127!3.23e-07!2;UBERON:0005178!8.43e-07!34;UBERON:0002224!8.43e-07!34 | |ontology_enrichment_uberon=UBERON:0000166!3.09e-21!21;UBERON:0001004!9.18e-21!72;UBERON:0000165!1.19e-17!28;UBERON:0000930!1.19e-17!28;UBERON:0000161!1.39e-15!35;UBERON:0003729!1.18e-14!5;UBERON:0004119!2.34e-12!169;UBERON:0000925!2.34e-12!169;UBERON:0006595!2.34e-12!169;UBERON:0003343!3.90e-12!4;UBERON:0004785!3.90e-12!4;UBERON:0001444!4.77e-12!48;UBERON:0000065!6.24e-12!53;UBERON:0003102!1.07e-10!95;UBERON:0003126!1.19e-10!7;UBERON:0001005!1.19e-10!7;UBERON:0001723!2.25e-10!3;UBERON:0001033!2.25e-10!3;UBERON:0010056!2.25e-10!3;UBERON:0000974!4.09e-10!10;UBERON:0007196!9.50e-10!14;UBERON:0001558!9.50e-10!14;UBERON:0006562!1.39e-09!11;UBERON:0001949!6.83e-09!3;UBERON:0001007!1.69e-08!155;UBERON:0001555!1.69e-08!155;UBERON:0007026!1.69e-08!155;UBERON:0000344!2.24e-08!12;UBERON:0000072!3.94e-08!46;UBERON:0000078!1.46e-07!18;UBERON:0001042!1.59e-07!10;UBERON:0009145!1.59e-07!10;UBERON:0001708!2.55e-07!4;UBERON:0001704!2.55e-07!4;UBERON:0003127!3.23e-07!2;UBERON:0005178!8.43e-07!34;UBERON:0002224!8.43e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0006562;5.27e-14;2!UBERON:0000002;8.29e-11;6!UBERON:0001560;8.29e-11;6!UBERON:0001723;2.16e-10;3!UBERON:0001033;2.16e-10;3!UBERON:0005795;2.12e-08;1!UBERON:0000997;2.90e-08;1!UBERON:0005056;2.90e-08;1!UBERON:0004176;2.90e-08;1!UBERON:0002372;7.59e-08;1!UBERON:0001961;7.59e-08;1!UBERON:0001744;7.59e-08;1!UBERON:0001042;7.59e-08;1!UBERON:0001735;7.59e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000002,6.46e-11,6;UBERON:0001560,6.46e-11,6;UBERON:0001723,2.21e-10,3;UBERON:0001033,2.21e-10,3;UBERON:0010056,2.21e-10,3;UBERON:0006562,4.88e-10,11;UBERON:0000997,2.90e-08,1;UBERON:0005056,2.90e-08,1;UBERON:0002372,7.10e-08,1;UBERON:0001961,7.10e-08,1;UBERON:0001744,7.10e-08,1;UBERON:0001735,7.10e-08,1;UBERON:0000166,1.19e-07,22 | |||
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| ||
|short_description=p@chr18:61265362..61265366,+ | |short_description=p@chr18:61265362..61265366,+ | ||
}} | }} |
Latest revision as of 01:51, 26 July 2015
Short description: | p@chr18:61265362..61265366, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:61265362..61265366, + |
Coexpression cluster: | C820_cervical_tongue_esophagus_throat_tonsil_oral_uterus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 8.71e-08 | 4 |
urothelial cell | 8.71e-08 | 4 |
endo-epithelial cell | 6.35e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
uterine cervix | 6.46e-11 | 6 |
neck of organ | 6.46e-11 | 6 |
tongue | 2.21e-10 | 3 |
gustatory system | 2.21e-10 | 3 |
future tongue | 2.21e-10 | 3 |
pharynx | 4.88e-10 | 11 |
mammalian vulva | 2.90e-08 | 1 |
external female genitalia | 2.90e-08 | 1 |
tonsil | 7.10e-08 | 1 |
mucosa-associated lymphoid tissue | 7.10e-08 | 1 |
lymphoid tissue | 7.10e-08 | 1 |
tonsillar ring | 7.10e-08 | 1 |
oral opening | 1.19e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 8.73e-17 | 14 |
skin squamous cell carcinoma | 1.77e-08 | 1 |
keratoacanthoma | 1.77e-08 | 1 |