FFCP PHASE1:Hg19::chr18:30950056..30950073,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:30950056..30950073,- | |||
|coexpression_cluster_id=C184 | |||
|description=CAGE_peak_at_chr18:30950056..30950073,- | |description=CAGE_peak_at_chr18:30950056..30950073,- | ||
|id=chr18:30950056..30950073,- | |id=chr18:30950056..30950073,- | ||
|ontology_enrichment_celltype=CL:0002368!3.28e-22!13;CL:0000068!4.86e-12!3;CL:0000069!4.86e-12!3;CL:0000307!4.86e-12!3;CL:0000377!4.86e-12!3;CL:0002076!3.94e-11!43;CL:0000167!7.98e-10!1;CL:0000164!7.98e-10!1;CL:0000502!7.98e-10!1;CL:0000172!7.98e-10!1;CL:0000173!7.98e-10!1;CL:0002351!7.98e-10!1;CL:0002336!1.84e-09!1;CL:0002261!1.84e-09!1;CL:0002170!1.84e-09!1;CL:0000223!8.10e-08!59 | |ontology_enrichment_celltype=CL:0002368!3.28e-22!13;CL:0000068!4.86e-12!3;CL:0000069!4.86e-12!3;CL:0000307!4.86e-12!3;CL:0000377!4.86e-12!3;CL:0002076!3.94e-11!43;CL:0000167!7.98e-10!1;CL:0000164!7.98e-10!1;CL:0000502!7.98e-10!1;CL:0000172!7.98e-10!1;CL:0000173!7.98e-10!1;CL:0002351!7.98e-10!1;CL:0002336!1.84e-09!1;CL:0002261!1.84e-09!1;CL:0002170!1.84e-09!1;CL:0000223!8.10e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0000167;1.46e-50;1!CL:0000164;1.46e-50;1!CL:0000502;1.46e-50;1!CL:0000172;1.46e-50;1!CL:0000173;1.46e-50;1!CL:0002231;9.45e-18;3!CL:0000307;9.45e-18;3!CL:0002368;3.07e-16;13!CL:0002076;3.21e-10;42!CL:0000150;7.48e-07;9!CL:0000163;7.48e-07;9!CL:0002202;8.37e-07;9!CL:0002632;8.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,1.46e-50,1;CL:0000164,1.46e-50,1;CL:0000502,1.46e-50,1;CL:0000172,1.46e-50,1;CL:0000173,1.46e-50,1;CL:0002351,1.46e-50,1;CL:0002231,8.00e-18,3;CL:0000068,1.12e-17,3;CL:0000069,1.12e-17,3;CL:0000307,1.12e-17,3;CL:0000377,1.12e-17,3;CL:0002368,3.31e-16,13;CL:0002076,1.73e-11,42;CL:0000223,1.46e-08,58;CL:0000150,7.48e-07,9;CL:0000163,7.48e-07,9;CL:0002202,8.85e-07,9;CL:0002632,8.85e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002351;1.46e-50;1!CL:0000377;9.45e-18;3!CL:0000223;2.91e-07;58 | |||
|ontology_enrichment_disease=DOID:4430!7.98e-10!1 | |ontology_enrichment_disease=DOID:4430!7.98e-10!1 | ||
|ontology_enrichment_disease_v019=DOID:4430;1.46e-50;1!DOID:169;1.22e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.46e-50,1;DOID:169,1.22e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0000007!3.98e-17!2;UBERON:0003296!5.09e-09!4;UBERON:0010133!5.09e-09!4;UBERON:0002336!5.72e-09!1;UBERON:0001018!5.72e-09!1;UBERON:0002473!5.72e-09!1;UBERON:0005340!5.72e-09!1;UBERON:0002316!5.72e-09!1;UBERON:0003544!5.72e-09!1;UBERON:0001020!5.72e-09!1;UBERON:0005970!5.72e-09!1;UBERON:0002437!5.72e-09!1 | |ontology_enrichment_uberon=UBERON:0000007!3.98e-17!2;UBERON:0003296!5.09e-09!4;UBERON:0010133!5.09e-09!4;UBERON:0002336!5.72e-09!1;UBERON:0001018!5.72e-09!1;UBERON:0002473!5.72e-09!1;UBERON:0005340!5.72e-09!1;UBERON:0002316!5.72e-09!1;UBERON:0003544!5.72e-09!1;UBERON:0001020!5.72e-09!1;UBERON:0005970!5.72e-09!1;UBERON:0002437!5.72e-09!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0003126;2.18e-08;7!UBERON:0001005;2.18e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,2.35e-08,7;UBERON:0001005,2.35e-08,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,1.15314040419064,0.510450849978337,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470317296361523,0,4.00650130072764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,1.15314040419064,0.510450849978337,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470317296361523,0,4.00650130072764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr18:30950056..30950073,- | |short_description=p@chr18:30950056..30950073,- | ||
}} | }} |
Latest revision as of 00:26, 26 July 2015
Short description: | p@chr18:30950056..30950073, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:30950056..30950073, - |
Coexpression cluster: | C184_somatostatinoma_smallcell_nonsmall_small_gastrointestinal_pineal_thyroid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 1.46e-50 | 1 |
enteroendocrine cell | 1.46e-50 | 1 |
type D enteroendocrine cell | 1.46e-50 | 1 |
somatostatin secreting cell | 1.46e-50 | 1 |
pancreatic D cell | 1.46e-50 | 1 |
progenitor cell of endocrine pancreas | 1.46e-50 | 1 |
epithelial cell of prostate | 8.00e-18 | 3 |
duct epithelial cell | 1.12e-17 | 3 |
branched duct epithelial cell | 1.12e-17 | 3 |
tracheal epithelial cell | 1.12e-17 | 3 |
tracheoblast | 1.12e-17 | 3 |
respiratory epithelial cell | 3.31e-16 | 13 |
endo-epithelial cell | 1.73e-11 | 42 |
endodermal cell | 1.46e-08 | 58 |
glandular epithelial cell | 7.48e-07 | 9 |
endocrine cell | 7.48e-07 | 9 |
epithelial cell of tracheobronchial tree | 8.85e-07 | 9 |
epithelial cell of lower respiratory tract | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
trachea | 2.35e-08 | 7 |
respiratory airway | 2.35e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.46e-50 | 1 |
neuroendocrine tumor | 1.22e-09 | 6 |