FFCP PHASE1:Hg19::chr17:29248918..29248949,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:29248918..29248949,+
|short_description=p2@ADAP2
|description=CAGE_peak_2_at_ADAP2_5end
|association_with_transcript=164bp_to_NM_018404,uc002hfx.2,uc002hf...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55803 | |EntrezGene=55803 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16487 | |HGNC=16487 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NPF8 | |UniProt=Q9NPF8 | ||
|association_with_transcript=164bp_to_NM_018404,uc002hfx.2,uc002hfy.2,uc010csk.2,uc010csl.2_5end | |||
|cluster_id=chr17:29248918..29248949,+ | |||
|coexpression_cluster_id=C294 | |||
|description=CAGE_peak_2_at_ADAP2_5end | |||
|id=chr17:29248918..29248949,+ | |||
|ontology_enrichment_celltype=CL:0002009!1.62e-33!65;CL:0002194!9.76e-33!63;CL:0000576!9.76e-33!63;CL:0000040!9.76e-33!63;CL:0000559!9.76e-33!63;CL:0000557!9.01e-29!71;CL:0002057!4.97e-28!42;CL:0000839!3.70e-27!70;CL:0000766!1.12e-26!76;CL:0000860!1.22e-24!45;CL:0002087!1.88e-19!119;CL:0000738!2.36e-18!140;CL:0002031!1.26e-16!124;CL:0000763!1.02e-14!112;CL:0000049!1.02e-14!112;CL:0000037!4.38e-10!172;CL:0000566!4.38e-10!172;CL:0002032!5.33e-10!165;CL:0000837!5.33e-10!165;CL:0000988!1.68e-09!182;CL:0002393!1.85e-08!9;CL:0002397!1.85e-08!9;CL:0000990!7.59e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.60e-31;39!CL:0000234;1.60e-31;39!CL:0000860;1.20e-29;33!CL:0002057;1.20e-29;33!CL:0000576;1.10e-28;48!CL:0000766;1.89e-20;69!CL:0000235;2.28e-09;6!CL:0002393;7.72e-09;6!CL:0002397;7.72e-09;6!CL:0000990;8.78e-09;8!CL:0000738;1.76e-08;136!CL:0000763;2.03e-08;100!CL:0002087;4.98e-08;104!CL:0000451;8.25e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,1.60e-52,61;CL:0002194,2.76e-51,59;CL:0000576,2.76e-51,59;CL:0000040,2.76e-51,59;CL:0000559,2.76e-51,59;CL:0000473,3.03e-51,48;CL:0000234,3.03e-51,48;CL:0000557,5.58e-46,67;CL:0000766,5.50e-44,72;CL:0000839,9.84e-44,66;CL:0000860,3.31e-43,42;CL:0002057,3.31e-43,42;CL:0000738,8.58e-30,136;CL:0000763,1.42e-29,108;CL:0000049,1.42e-29,108;CL:0002087,5.04e-29,115;CL:0002031,2.59e-25,120;CL:0000037,2.67e-20,168;CL:0000988,1.52e-19,177;CL:0002032,1.76e-19,161;CL:0000837,1.76e-19,161;CL:0002393,1.28e-12,9;CL:0002397,1.28e-12,9;CL:0000235,2.33e-09,6;CL:0000990,1.07e-08,8;CL:0000451,9.62e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;1.05e-31;42!CL:0000049;1.88e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.56e-31!115;UBERON:0002390!2.89e-26!102;UBERON:0003061!2.89e-26!102;UBERON:0002371!1.68e-23!80;UBERON:0002193!2.11e-23!112;UBERON:0001474!1.02e-20!86;UBERON:0002405!1.43e-17!115;UBERON:0000062!2.01e-16!511;UBERON:0004765!1.28e-14!101;UBERON:0001434!1.28e-14!101;UBERON:0001049!1.38e-10!57;UBERON:0005068!1.38e-10!57;UBERON:0006241!1.38e-10!57;UBERON:0007135!1.38e-10!57;UBERON:0000922!1.40e-10!612;UBERON:0002050!1.69e-10!605;UBERON:0005423!1.69e-10!605;UBERON:0000923!3.05e-10!604;UBERON:0005291!3.05e-10!604;UBERON:0006598!3.05e-10!604;UBERON:0002532!3.05e-10!604;UBERON:0000467!4.06e-10!625;UBERON:0000480!5.71e-10!626;UBERON:0003080!7.73e-09!42;UBERON:0002780!2.05e-08!41;UBERON:0001890!2.05e-08!41;UBERON:0006240!2.05e-08!41;UBERON:0003075!5.15e-08!86;UBERON:0007284!5.15e-08!86;UBERON:0002616!6.91e-08!59;UBERON:0003081!1.69e-07!216;UBERON:0000955!2.46e-07!69;UBERON:0006238!2.46e-07!69;UBERON:0000468!2.46e-07!659;UBERON:0002020!3.72e-07!34;UBERON:0003528!3.72e-07!34;UBERON:0001893!5.03e-07!34;UBERON:0002346!6.27e-07!90;UBERON:0002791!7.78e-07!33 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.31e-43,98;UBERON:0003061,1.31e-43,98;UBERON:0002193,3.10e-40,108;UBERON:0002371,5.28e-40,76;UBERON:0001474,1.41e-35,82;UBERON:0002405,1.16e-34,93;UBERON:0004765,1.27e-30,90;UBERON:0001434,1.36e-25,100;UBERON:0007023,3.43e-22,114;UBERON:0003081,2.09e-15,203;UBERON:0002204,2.06e-10,167;UBERON:0001049,9.58e-07,56;UBERON:0005068,9.58e-07,56;UBERON:0006241,9.58e-07,56;UBERON:0007135,9.58e-07,56 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,6.29382842958246,1.91914699048606,4.79929982279836,0.919421224478927,0,0.369754010166788,0,0,0,6.09394949385065,7.2196001089251,8.24641308720237,15.8979986710346,10.3645973126073,20.6060454107349,8.28769961043519,6.80176698639857,9.46077838632483,4.64858073811369,4.52284676824008,3.09706370895104,3.45230870786581,5.37937483711111,3.07426898855161,7.92915065694223,3.22742341791913,6.77132432971709,4.1413314699373,3.0019676506363,0.449446968890169,5.50951006267625,3.20929027076094,8.95071976118658,3.29851300186716,4.58766412529753,5.11469700639233,4.64334781805734,2.26954089876456,0,6.28121663141858,5.73631210262222,5.86409880703815,3.02699751316684,2.20966581592539,2.53169909952708,7.6051903072299,11.9058407980424,9.85395633889367,8.76163322942662,8.86043667764887,10.9293398954014,12.8255734683562,12.3328339863436,13.5171473785829,3.51992488922645,1.09227722252426,1.77901850772711,0.853460445133014,1.20118796110804,1.72425731986345,1.98313461835459,0.954053754535364,1.1384259382189,0.587237189370939,0.382273228125229,0,0,0.263384084775077,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,1.24930726552346,0.473554504088034,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,1.24430121722827,0.364295288292542,0.741568885568859,12.9818957461873,12.363211348248,10.7695948020281,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267899184852239,0.22452937262617,0.337834441449967,0,0,0,0,0,2.18047026071267,0,0,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0.310983165046111,0,0.36497735907583,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,1.26755034821831,0.982827216677626,2.95394953340702,0,0.245976877086227,0,0,2.24803506515239,0.201057944823262,0.370353780634118,0.325808305310325,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,23.6368325843901,14.742268703772,17.3898459877812,0,0,0.283550194484773,0,0.290633938513962,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.224262168690721,0,0.1466765716419,0,0,0,0,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,20.6760427090024,19.0857694744208,6.32501818449095,0,0,0,0,0,0,0,0.788123040807709,0,0.128343036279748,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17480694477644,0,3.3082884179662,4.52999821719095,2.24127871387233,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0.276242966807689,0.114814448164607,0.546273504020151,0.393373244878272,0,0.693138033939733,0.784349769176855,0,0.844413031143006,0,0.170093705276516,0.431831832204279,0,2.43851793789468,0.501689773854853,1.52925763827023,0,0.895499018888713,0,0,0.512900250232778,0,0,1.54561517471583,0,0,2.29706215198469,1.30012049207304,0,0.096670718292122,0,0,0.137836572484531,0,0,0.0852266274161009,0,0.330569830721956,0,0.127612712494584,0.4046311234222,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0.511795582622668,0.42793898803392,0.318203247925937,0,0.179872457583315,0,0.353437207037059,0,0,0.421258456238981,0,0.243713489631284,0,0.272999822815972,0.282810863907425,0,0,0,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0,0,0,0,0.288666338176536,0,0,2.16530741786592,0,0,0,0,2.53723804616085,0.764637207142375,3.98753031021914,1.42939065274673,3.70226045777575,1.29694662238543,3.24018862342869,0,0.427296284509893,0,0.245040215981032,0,0,0,0,0,0.383010740264733,0,0,0,0,0,0,0,0,0,1.27753871307098,0,0.307240764308458,0.894704431569664,0.333698283423817,0,0,0,0,0,0,0,4.10222901961303,0.36408156524854,0,0.284136146806413,0.23874448473769,0,0,0,1.96937182974718,0.111308705022906,0,0,1.59398390600856,1.38141957765574,0,0,0.123084805461069,0,0.0898683511473268,0,0,0.986434056369336,4.7896618469388,0,2.90799823828566,0.649376687132959,3.99227596002388,0,0,2.17499872630438,0.1137934482855,0.254253650292766,0.472775363535873,0,0,0,1.77148277162768,1.20596438625408,0,0.552896299656123,0.295547618953547,0,0,0.41827123283581,0.692552326534174,0,5.7640976097015,0.448788222048861,3.69401064534827,0,0,0,0,0,0,0,0,0,0,0,1.26598838716816,0.163232808159148,0,0,0,0.530745387020035,0.611030144933625,0,0,0,2.22423738836234,2.40773294189637,1.63985112007737,0,0.391329237864179,0.971121518136371,0.789168805698781,3.62972148145992,0,6.95052375913368,0.901940516486955,1.55532287095871,0.664653872707185,0.661983911750998,1.2557316736289,0,0.284609546029793,0,1.56203764501618,0,0,0.52418000472609,0,0,0,0,0.678923115418936,0.970817393606503,1.12990370390266,0,0,1.32952671507345,0,0.0801588202515337,1.28071796843612,0.39961921916426,0.576361668616424,1.83258553865465,0,0,0.621262677827163,1.17847017308398,0.271808412147228,0,0,0,0.600420288709789,3.14882371451584,0,0,0,1.39641200636127,0.916641696046735,0.717873024576814,1.19807400299395,1.71690419254628,1.78537165953498,1.5452198671947,0.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| 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| ||
|short_description=p2@ADAP2 | |||
}} | }} |
Latest revision as of 10:36, 19 September 2015
Short description: | p2@ADAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ADAP2_5end |
Coexpression cluster: | C294_CD14_Macrophage_Monocytederived_CD14CD16_Neutrophils_Basophils_Peripheral |
Association with transcript: | 164bp_to_NM_018404, uc002hfx.2, uc002hfy.2, uc010csk.2, uc010csl.2_5end |
EntrezGene: | ADAP2 |
HGNC: | 16487 |
UniProt: | Q9NPF8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 1.60e-52 | 61 |
monopoietic cell | 2.76e-51 | 59 |
monocyte | 2.76e-51 | 59 |
monoblast | 2.76e-51 | 59 |
promonocyte | 2.76e-51 | 59 |
defensive cell | 3.03e-51 | 48 |
phagocyte | 3.03e-51 | 48 |
granulocyte monocyte progenitor cell | 5.58e-46 | 67 |
myeloid leukocyte | 5.50e-44 | 72 |
myeloid lineage restricted progenitor cell | 9.84e-44 | 66 |
classical monocyte | 3.31e-43 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.31e-43 | 42 |
leukocyte | 8.58e-30 | 136 |
myeloid cell | 1.42e-29 | 108 |
common myeloid progenitor | 1.42e-29 | 108 |
nongranular leukocyte | 5.04e-29 | 115 |
hematopoietic lineage restricted progenitor cell | 2.59e-25 | 120 |
hematopoietic stem cell | 2.67e-20 | 168 |
hematopoietic cell | 1.52e-19 | 177 |
hematopoietic oligopotent progenitor cell | 1.76e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.76e-19 | 161 |
intermediate monocyte | 1.28e-12 | 9 |
CD14-positive, CD16-positive monocyte | 1.28e-12 | 9 |
macrophage | 2.33e-09 | 6 |
conventional dendritic cell | 1.07e-08 | 8 |
dendritic cell | 9.62e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.31e-43 | 98 |
blood island | 1.31e-43 | 98 |
hemolymphoid system | 3.10e-40 | 108 |
bone marrow | 5.28e-40 | 76 |
bone element | 1.41e-35 | 82 |
immune system | 1.16e-34 | 93 |
skeletal element | 1.27e-30 | 90 |
skeletal system | 1.36e-25 | 100 |
adult organism | 3.43e-22 | 114 |
lateral plate mesoderm | 2.09e-15 | 203 |
musculoskeletal system | 2.06e-10 | 167 |
neural tube | 9.58e-07 | 56 |
neural rod | 9.58e-07 | 56 |
future spinal cord | 9.58e-07 | 56 |
neural keel | 9.58e-07 | 56 |