FFCP PHASE1:Hg19::chr17:7167279..7167298,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:7167279..7167298,- | |||
|coexpression_cluster_id=C165 | |||
|description=CAGE_peak_at_chr17:7167279..7167298,- | |description=CAGE_peak_at_chr17:7167279..7167298,- | ||
|id=chr17:7167279..7167298,- | |id=chr17:7167279..7167298,- | ||
|ontology_enrichment_celltype=CL:0000066!2.14e-23!254;CL:0002076!7.64e-10!43;CL:1000449!3.75e-09!16;CL:1000497!9.50e-09!18;CL:0002518!9.50e-09!18;CL:0002681!1.92e-08!13;CL:0002584!1.92e-08!13;CL:1000507!8.00e-08!12;CL:1000494!8.00e-08!12 | |ontology_enrichment_celltype=CL:0000066!2.14e-23!254;CL:0002076!7.64e-10!43;CL:1000449!3.75e-09!16;CL:1000497!9.50e-09!18;CL:0002518!9.50e-09!18;CL:0002681!1.92e-08!13;CL:0002584!1.92e-08!13;CL:1000507!8.00e-08!12;CL:1000494!8.00e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:1000449;1.37e-11;15!CL:0002681;2.27e-11;12!CL:0002584;2.27e-11;12!CL:1000507;2.70e-10;10!CL:1000494;2.70e-10;10!CL:1000497;4.67e-10;17!CL:0002518;4.67e-10;17!CL:0000244;2.27e-07;4!CL:0000731;2.27e-07;4!CL:1000415;5.31e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.23e-14,253;CL:1000449,9.96e-12,15;CL:0002681,1.65e-11,12;CL:0002584,1.65e-11,12;CL:1000507,2.13e-10,10;CL:1000494,2.13e-10,10;CL:1000497,3.54e-10,17;CL:0002518,3.54e-10,17;CL:0000244,1.62e-07,4;CL:0000731,1.62e-07,4;CL:1000415,6.19e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;4.64e-07;2 | |||
|ontology_enrichment_disease=DOID:305!8.38e-21!106;DOID:0050687!9.08e-17!143;DOID:1749!9.80e-09!14;DOID:162!7.71e-08!235;DOID:14566!3.05e-07!239;DOID:299!4.48e-07!25 | |ontology_enrichment_disease=DOID:305!8.38e-21!106;DOID:0050687!9.08e-17!143;DOID:1749!9.80e-09!14;DOID:162!7.71e-08!235;DOID:14566!3.05e-07!239;DOID:299!4.48e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:305;2.57e-07;106!DOID:1749;3.12e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.52e-18,106;DOID:0050687,6.91e-14,143;DOID:1749,2.50e-07,14;DOID:162,3.64e-07,235;DOID:14566,7.51e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.37e-13!169;UBERON:0000925!2.37e-13!169;UBERON:0006595!2.37e-13!169;UBERON:0006554!2.62e-13!44;UBERON:0001008!8.86e-13!45;UBERON:0000058!1.20e-12!26;UBERON:0000065!3.37e-12!53;UBERON:0000080!6.66e-11!18;UBERON:0002120!6.66e-11!18;UBERON:0004875!6.66e-11!18;UBERON:0005721!6.66e-11!18;UBERON:0005754!6.66e-11!18;UBERON:0007297!6.66e-11!18;UBERON:0000072!6.90e-11!46;UBERON:0004876!8.40e-11!20;UBERON:0004921!1.17e-10!129;UBERON:0004185!1.17e-10!129;UBERON:0002113!1.27e-10!27;UBERON:0003918!1.27e-10!27;UBERON:0005095!1.27e-10!27;UBERON:0007687!1.27e-10!27;UBERON:0008947!1.65e-10!38;UBERON:0003258!1.65e-10!38;UBERON:0001007!1.67e-10!155;UBERON:0001555!1.67e-10!155;UBERON:0007026!1.67e-10!155;UBERON:0000464!3.87e-10!104;UBERON:0006555!6.37e-10!17;UBERON:0005103!6.37e-10!17;UBERON:0000083!6.37e-10!17;UBERON:0009201!6.37e-10!17;UBERON:0004819!6.37e-10!17;UBERON:0006553!6.37e-10!17;UBERON:0003074!6.37e-10!17;UBERON:0003060!6.37e-10!17;UBERON:0004211!3.75e-09!16;UBERON:0001285!3.75e-09!16;UBERON:0007684!3.75e-09!16;UBERON:0003220!3.75e-09!16;UBERON:0004208!3.75e-09!16;UBERON:0000489!6.92e-09!32;UBERON:0003887!1.33e-08!21;UBERON:0001225!1.92e-08!13;UBERON:0008987!1.92e-08!13;UBERON:0001004!2.53e-08!72;UBERON:0003064!2.85e-08!37;UBERON:0001737!3.35e-08!9;UBERON:0000466!4.42e-08!126;UBERON:0000077!5.70e-08!130;UBERON:0005177!5.84e-08!107;UBERON:0009773!8.00e-08!12;UBERON:0001231!8.00e-08!12;UBERON:0004810!8.00e-08!12;UBERON:0003104!1.34e-07!238;UBERON:0009142!1.34e-07!238;UBERON:0001557!1.97e-07!19;UBERON:0005178!4.16e-07!34;UBERON:0002224!4.16e-07!34;UBERON:0009569!9.11e-07!113;UBERON:0005181!9.84e-07!35 | |ontology_enrichment_uberon=UBERON:0004119!2.37e-13!169;UBERON:0000925!2.37e-13!169;UBERON:0006595!2.37e-13!169;UBERON:0006554!2.62e-13!44;UBERON:0001008!8.86e-13!45;UBERON:0000058!1.20e-12!26;UBERON:0000065!3.37e-12!53;UBERON:0000080!6.66e-11!18;UBERON:0002120!6.66e-11!18;UBERON:0004875!6.66e-11!18;UBERON:0005721!6.66e-11!18;UBERON:0005754!6.66e-11!18;UBERON:0007297!6.66e-11!18;UBERON:0000072!6.90e-11!46;UBERON:0004876!8.40e-11!20;UBERON:0004921!1.17e-10!129;UBERON:0004185!1.17e-10!129;UBERON:0002113!1.27e-10!27;UBERON:0003918!1.27e-10!27;UBERON:0005095!1.27e-10!27;UBERON:0007687!1.27e-10!27;UBERON:0008947!1.65e-10!38;UBERON:0003258!1.65e-10!38;UBERON:0001007!1.67e-10!155;UBERON:0001555!1.67e-10!155;UBERON:0007026!1.67e-10!155;UBERON:0000464!3.87e-10!104;UBERON:0006555!6.37e-10!17;UBERON:0005103!6.37e-10!17;UBERON:0000083!6.37e-10!17;UBERON:0009201!6.37e-10!17;UBERON:0004819!6.37e-10!17;UBERON:0006553!6.37e-10!17;UBERON:0003074!6.37e-10!17;UBERON:0003060!6.37e-10!17;UBERON:0004211!3.75e-09!16;UBERON:0001285!3.75e-09!16;UBERON:0007684!3.75e-09!16;UBERON:0003220!3.75e-09!16;UBERON:0004208!3.75e-09!16;UBERON:0000489!6.92e-09!32;UBERON:0003887!1.33e-08!21;UBERON:0001225!1.92e-08!13;UBERON:0008987!1.92e-08!13;UBERON:0001004!2.53e-08!72;UBERON:0003064!2.85e-08!37;UBERON:0001737!3.35e-08!9;UBERON:0000466!4.42e-08!126;UBERON:0000077!5.70e-08!130;UBERON:0005177!5.84e-08!107;UBERON:0009773!8.00e-08!12;UBERON:0001231!8.00e-08!12;UBERON:0004810!8.00e-08!12;UBERON:0003104!1.34e-07!238;UBERON:0009142!1.34e-07!238;UBERON:0001557!1.97e-07!19;UBERON:0005178!4.16e-07!34;UBERON:0002224!4.16e-07!34;UBERON:0009569!9.11e-07!113;UBERON:0005181!9.84e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0002294;3.54e-14;7!UBERON:0001173;3.54e-14;7!UBERON:0000058;1.81e-13;10!UBERON:0006554;1.13e-11;30!UBERON:0001008;1.13e-11;30!UBERON:0006555;1.37e-11;15!UBERON:0004819;1.37e-11;15!UBERON:0001285;1.37e-11;15!UBERON:0007684;1.37e-11;15!UBERON:0001225;2.27e-11;12!UBERON:0008987;2.27e-11;12!UBERON:0004211;2.70e-10;10!UBERON:0009773;2.70e-10;10!UBERON:0001231;2.70e-10;10!UBERON:0004810;2.70e-10;10!UBERON:0006947;4.31e-10;3!UBERON:0004054;4.31e-10;3!UBERON:0003135;1.00e-09;11!UBERON:0002110;1.99e-09;3!UBERON:0000160;3.81e-09;17!UBERON:0001851;7.06e-09;15!UBERON:0000353;7.06e-09;15!UBERON:0005409;7.82e-09;22!UBERON:0002113;2.03e-08;24!UBERON:0011143;2.03e-08;24!UBERON:0004921;3.68e-08;33!UBERON:0005904;1.18e-07;4!UBERON:0002394;8.52e-07;4!UBERON:0003928;8.52e-07;4 | |||
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|short_description=p@chr17:7167279..7167298,- | |short_description=p@chr17:7167279..7167298,- | ||
}} | }} |
Latest revision as of 20:43, 25 July 2015
Short description: | p@chr17:7167279..7167298, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:7167279..7167298, - |
Coexpression cluster: | C165_epithelioid_Adipocyte_mesothelioma_myxofibrosarcoma_lung_gastric_Mesothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.23e-14 | 253 |
epithelial cell of nephron | 9.96e-12 | 15 |
kidney cortical cell | 1.65e-11 | 12 |
renal cortical epithelial cell | 1.65e-11 | 12 |
kidney tubule cell | 2.13e-10 | 10 |
nephron tubule epithelial cell | 2.13e-10 | 10 |
kidney cell | 3.54e-10 | 17 |
kidney epithelial cell | 3.54e-10 | 17 |
transitional epithelial cell | 1.62e-07 | 4 |
urothelial cell | 1.62e-07 | 4 |
epithelial cell of gall bladder | 6.19e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.52e-18 | 106 |
cell type cancer | 6.91e-14 | 143 |
squamous cell carcinoma | 2.50e-07 | 14 |
cancer | 3.64e-07 | 235 |
disease of cellular proliferation | 7.51e-07 | 239 |