FFCP PHASE1:Hg19::chrX:12884985..12885009,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51284 | |EntrezGene=51284 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15631 | |HGNC=15631 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NYK1,B2R9N9 | |UniProt=Q9NYK1,B2R9N9 | ||
|association_with_transcript=-192bp_to_ENST00000380659,NM_016562,uc004cvc.2_5end | |association_with_transcript=-192bp_to_ENST00000380659,NM_016562,uc004cvc.2_5end | ||
|cluster_id=chrX:12884985..12885009,+ | |||
|coexpression_cluster_id=C342 | |||
|description=CAGE_peak_6_at_TLR7_5end | |description=CAGE_peak_6_at_TLR7_5end | ||
|id=chrX:12884985..12885009,+ | |id=chrX:12884985..12885009,+ | ||
|ontology_enrichment_celltype=CL:0002087!7.53e-38!119;CL:0000738!9.80e-36!140;CL:0002031!4.92e-34!124;CL:0000945!4.65e-33!24;CL:0000826!4.65e-33!24;CL:0000037!3.17e-28!172;CL:0000566!3.17e-28!172;CL:0002057!1.19e-26!42;CL:0000988!5.44e-26!182;CL:0002032!1.59e-25!165;CL:0000837!1.59e-25!165;CL:0000860!1.80e-24!45;CL:0002194!5.97e-23!63;CL:0000576!5.97e-23!63;CL:0000040!5.97e-23!63;CL:0000559!5.97e-23!63;CL:0002009!4.86e-22!65;CL:0000236!3.62e-20!14;CL:0000839!5.43e-20!70;CL:0000766!1.25e-19!76;CL:0000557!1.29e-19!71;CL:0000838!2.57e-14!52;CL:0000542!5.90e-14!53;CL:0000051!5.90e-14!53;CL:0000763!3.33e-12!112;CL:0000049!3.33e-12!112;CL:0002393!2.03e-07!9;CL:0002397!2.03e-07!9;CL:0000134!2.30e-07!358;CL:0000785!3.53e-07!2;CL:0000955!3.53e-07!2;CL:0000818!3.53e-07!2;CL:0000954!3.53e-07!2;CL:0000816!3.53e-07!2;CL:0002320!5.17e-07!365 | |ontology_enrichment_celltype=CL:0002087!7.53e-38!119;CL:0000738!9.80e-36!140;CL:0002031!4.92e-34!124;CL:0000945!4.65e-33!24;CL:0000826!4.65e-33!24;CL:0000037!3.17e-28!172;CL:0000566!3.17e-28!172;CL:0002057!1.19e-26!42;CL:0000988!5.44e-26!182;CL:0002032!1.59e-25!165;CL:0000837!1.59e-25!165;CL:0000860!1.80e-24!45;CL:0002194!5.97e-23!63;CL:0000576!5.97e-23!63;CL:0000040!5.97e-23!63;CL:0000559!5.97e-23!63;CL:0002009!4.86e-22!65;CL:0000236!3.62e-20!14;CL:0000839!5.43e-20!70;CL:0000766!1.25e-19!76;CL:0000557!1.29e-19!71;CL:0000838!2.57e-14!52;CL:0000542!5.90e-14!53;CL:0000051!5.90e-14!53;CL:0000763!3.33e-12!112;CL:0000049!3.33e-12!112;CL:0002393!2.03e-07!9;CL:0002397!2.03e-07!9;CL:0000134!2.30e-07!358;CL:0000785!3.53e-07!2;CL:0000955!3.53e-07!2;CL:0000818!3.53e-07!2;CL:0000954!3.53e-07!2;CL:0000816!3.53e-07!2;CL:0002320!5.17e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000945;5.20e-70;24!CL:0000542;6.56e-18;53!CL:0000236;9.51e-18;13!CL:0000946;8.63e-16;1!CL:0000786;8.63e-16;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.07e-70,24;CL:0000826,3.07e-70,24;CL:0000838,6.12e-32,52;CL:0000542,2.55e-31,53;CL:0000051,2.55e-31,53;CL:0000236,2.20e-25,14;CL:0002087,1.79e-16,115;CL:0000946,8.63e-16,1;CL:0000786,8.63e-16,1;CL:0000980,8.63e-16,1;CL:0002031,9.64e-16,120;CL:0000738,9.29e-14,136;CL:0002032,1.95e-11,161;CL:0000837,1.95e-11,161;CL:0000037,6.58e-11,168;CL:0000988,2.74e-10,177;CL:0000785,1.50e-08,2;CL:0000955,1.50e-08,2;CL:0000818,1.50e-08,2;CL:0000954,1.50e-08,2;CL:0000816,1.50e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000051;6.56e-18;53!CL:0000954;1.50e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:630;5.56e-16;1!DOID:0050177;5.56e-16;1!DOID:0050427;5.56e-16;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,5.56e-16,1;DOID:0050177,5.56e-16,1;DOID:0050427,5.56e-16,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.08e-22!102;UBERON:0003061!2.08e-22!102;UBERON:0002193!3.52e-21!112;UBERON:0002371!1.15e-16!80;UBERON:0002405!2.74e-16!115;UBERON:0001474!4.79e-15!86;UBERON:0004765!7.43e-12!101;UBERON:0001434!7.43e-12!101;UBERON:0004177!2.12e-09!7;UBERON:0002106!8.44e-09!3;UBERON:0004854!8.44e-09!3;UBERON:0009034!8.44e-09!3;UBERON:0002095!8.44e-09!3;UBERON:0004782!8.44e-09!3;UBERON:0003281!8.44e-09!3;UBERON:0009664!8.44e-09!3;UBERON:0002296!8.44e-09!3;UBERON:0005602!8.44e-09!3;UBERON:0001179!8.44e-09!3;UBERON:0006293!8.44e-09!3;UBERON:0003081!1.79e-07!216 | |ontology_enrichment_uberon=UBERON:0002390!2.08e-22!102;UBERON:0003061!2.08e-22!102;UBERON:0002193!3.52e-21!112;UBERON:0002371!1.15e-16!80;UBERON:0002405!2.74e-16!115;UBERON:0001474!4.79e-15!86;UBERON:0004765!7.43e-12!101;UBERON:0001434!7.43e-12!101;UBERON:0004177!2.12e-09!7;UBERON:0002106!8.44e-09!3;UBERON:0004854!8.44e-09!3;UBERON:0009034!8.44e-09!3;UBERON:0002095!8.44e-09!3;UBERON:0004782!8.44e-09!3;UBERON:0003281!8.44e-09!3;UBERON:0009664!8.44e-09!3;UBERON:0002296!8.44e-09!3;UBERON:0005602!8.44e-09!3;UBERON:0001179!8.44e-09!3;UBERON:0006293!8.44e-09!3;UBERON:0003081!1.79e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0002372;2.06e-15;1!UBERON:0001961;2.06e-15;1!UBERON:0001744;2.06e-15;1!UBERON:0001042;2.06e-15;1!UBERON:0001735;2.06e-15;1!UBERON:0006562;2.31e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,3.66e-15,1;UBERON:0001961,3.66e-15,1;UBERON:0001744,3.66e-15,1;UBERON:0001735,3.66e-15,1 | |||
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| ||
|short_description=p6@TLR7 | |short_description=p6@TLR7 | ||
}} | }} |
Latest revision as of 09:03, 19 September 2015
Short description: | p6@TLR7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TLR7_5end |
Coexpression cluster: | C342_xeroderma_b_B_splenic_plasma_Burkitt_thymus |
Association with transcript: | -192bp_to_ENST00000380659, NM_016562, uc004cvc.2_5end |
EntrezGene: | TLR7 |
HGNC: | 15631 |
UniProt: | Q9NYK1B2R9N9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.07e-70 | 24 |
pro-B cell | 3.07e-70 | 24 |
lymphoid lineage restricted progenitor cell | 6.12e-32 | 52 |
lymphocyte | 2.55e-31 | 53 |
common lymphoid progenitor | 2.55e-31 | 53 |
B cell | 2.20e-25 | 14 |
nongranular leukocyte | 1.79e-16 | 115 |
antibody secreting cell | 8.63e-16 | 1 |
plasma cell | 8.63e-16 | 1 |
plasmablast | 8.63e-16 | 1 |
hematopoietic lineage restricted progenitor cell | 9.64e-16 | 120 |
leukocyte | 9.29e-14 | 136 |
hematopoietic oligopotent progenitor cell | 1.95e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.95e-11 | 161 |
hematopoietic stem cell | 6.58e-11 | 168 |
hematopoietic cell | 2.74e-10 | 177 |
mature B cell | 1.50e-08 | 2 |
pre-B-II cell | 1.50e-08 | 2 |
transitional stage B cell | 1.50e-08 | 2 |
small pre-B-II cell | 1.50e-08 | 2 |
immature B cell | 1.50e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
tonsil | 3.66e-15 | 1 |
mucosa-associated lymphoid tissue | 3.66e-15 | 1 |
lymphoid tissue | 3.66e-15 | 1 |
tonsillar ring | 3.66e-15 | 1 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 5.56e-16 | 1 |
monogenic disease | 5.56e-16 | 1 |
xeroderma pigmentosum | 5.56e-16 | 1 |