FFCP PHASE1:Hg19::chr9:98637889..98637919,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=375748 | |EntrezGene=375748 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26922 | |HGNC=26922 | ||
|TSSclassifier=strong | |||
|UniProt=F2Z2R4,Q5T890 | |UniProt=F2Z2R4,Q5T890 | ||
|association_with_transcript=0bp_to_ENST00000405401,NM_001010895,uc004avt.3,uc010mrx.1,uc010mry.1,uc011lum.1_5end | |association_with_transcript=0bp_to_ENST00000405401,NM_001010895,uc004avt.3,uc010mrx.1,uc010mry.1,uc011lum.1_5end | ||
|cluster_id=chr9:98637889..98637919,+ | |||
|description=CAGE_peak_4_at_C9orf102_5end | |description=CAGE_peak_4_at_C9orf102_5end | ||
|id=chr9:98637889..98637919,+ | |id=chr9:98637889..98637919,+ | ||
|ontology_enrichment_celltype=CL:0002087!7.73e-17!119;CL:0000738!1.52e-16!140;CL:0000037!1.11e-15!172;CL:0000566!1.11e-15!172;CL:0002031!8.71e-15!124;CL:0000988!3.86e-14!182;CL:0000542!4.12e-13!53;CL:0000051!4.12e-13!53;CL:0002032!5.42e-13!165;CL:0000837!5.42e-13!165;CL:0000838!8.31e-13!52;CL:0000791!8.95e-11!18;CL:0000789!8.95e-11!18;CL:0002420!8.95e-11!18;CL:0002419!8.95e-11!18;CL:0000790!8.95e-11!18;CL:0000084!1.61e-09!25;CL:0000827!1.61e-09!25;CL:0000625!1.78e-07!11 | |ontology_enrichment_celltype=CL:0002087!7.73e-17!119;CL:0000738!1.52e-16!140;CL:0000037!1.11e-15!172;CL:0000566!1.11e-15!172;CL:0002031!8.71e-15!124;CL:0000988!3.86e-14!182;CL:0000542!4.12e-13!53;CL:0000051!4.12e-13!53;CL:0002032!5.42e-13!165;CL:0000837!5.42e-13!165;CL:0000838!8.31e-13!52;CL:0000791!8.95e-11!18;CL:0000789!8.95e-11!18;CL:0002420!8.95e-11!18;CL:0002419!8.95e-11!18;CL:0000790!8.95e-11!18;CL:0000084!1.61e-09!25;CL:0000827!1.61e-09!25;CL:0000625!1.78e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.54e-13;18!CL:0000789;1.54e-13;18!CL:0002419;1.54e-13;18!CL:0000084;3.76e-13;25!CL:0000625;1.49e-09;11!CL:0000542;2.92e-09;53!CL:0000624;9.10e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.64e-15,53;CL:0000051,1.64e-15,53;CL:0000838,4.82e-15,52;CL:0002087,7.11e-15,115;CL:0000738,3.58e-14,136;CL:0000791,4.46e-14,18;CL:0000789,4.46e-14,18;CL:0002420,4.46e-14,18;CL:0002419,4.46e-14,18;CL:0000790,4.46e-14,18;CL:0000084,1.35e-13,25;CL:0000827,1.35e-13,25;CL:0000037,4.91e-11,168;CL:0002031,5.18e-11,120;CL:0000988,5.45e-10,177;CL:0000625,6.93e-10,11;CL:0002032,4.07e-08,161;CL:0000837,4.07e-08,161;CL:0000624,5.11e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;1.54e-13;18!CL:0000051;2.92e-09;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.69e-25!115;UBERON:0001049!6.00e-11!57;UBERON:0005068!6.00e-11!57;UBERON:0006241!6.00e-11!57;UBERON:0007135!6.00e-11!57;UBERON:0003080!3.68e-09!42;UBERON:0002780!3.98e-09!41;UBERON:0001890!3.98e-09!41;UBERON:0006240!3.98e-09!41;UBERON:0002616!5.44e-09!59;UBERON:0002020!6.33e-08!34;UBERON:0003528!6.33e-08!34;UBERON:0001893!8.31e-08!34;UBERON:0002390!1.05e-07!102;UBERON:0003061!1.05e-07!102;UBERON:0002791!1.44e-07!33;UBERON:0001869!5.33e-07!32;UBERON:0000955!6.05e-07!69;UBERON:0006238!6.05e-07!69 | |ontology_enrichment_uberon=UBERON:0007023!1.69e-25!115;UBERON:0001049!6.00e-11!57;UBERON:0005068!6.00e-11!57;UBERON:0006241!6.00e-11!57;UBERON:0007135!6.00e-11!57;UBERON:0003080!3.68e-09!42;UBERON:0002780!3.98e-09!41;UBERON:0001890!3.98e-09!41;UBERON:0006240!3.98e-09!41;UBERON:0002616!5.44e-09!59;UBERON:0002020!6.33e-08!34;UBERON:0003528!6.33e-08!34;UBERON:0001893!8.31e-08!34;UBERON:0002390!1.05e-07!102;UBERON:0003061!1.05e-07!102;UBERON:0002791!1.44e-07!33;UBERON:0001869!5.33e-07!32;UBERON:0000955!6.05e-07!69;UBERON:0006238!6.05e-07!69 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.02e-22,114;UBERON:0001049,4.16e-09,56;UBERON:0005068,4.16e-09,56;UBERON:0006241,4.16e-09,56;UBERON:0007135,4.16e-09,56;UBERON:0000073,2.58e-08,53;UBERON:0002616,2.58e-08,53;UBERON:0002780,1.57e-07,41;UBERON:0001890,1.57e-07,41;UBERON:0003080,1.57e-07,41;UBERON:0006240,1.57e-07,41 | |||
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| ||
|short_description=p4@C9orf102 | |short_description=p4@C9orf102 | ||
}} | }} |
Latest revision as of 11:08, 18 September 2015
Short description: | p4@C9orf102 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C9orf102_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000405401, NM_001010895, uc004avt.3, uc010mrx.1, uc010mry.1, uc011lum.1_5end |
EntrezGene: | C9orf102 |
HGNC: | 26922 |
UniProt: | F2Z2R4Q5T890 |
Genome view: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.64e-15 | 53 |
common lymphoid progenitor | 1.64e-15 | 53 |
lymphoid lineage restricted progenitor cell | 4.82e-15 | 52 |
nongranular leukocyte | 7.11e-15 | 115 |
leukocyte | 3.58e-14 | 136 |
mature alpha-beta T cell | 4.46e-14 | 18 |
alpha-beta T cell | 4.46e-14 | 18 |
immature T cell | 4.46e-14 | 18 |
mature T cell | 4.46e-14 | 18 |
immature alpha-beta T cell | 4.46e-14 | 18 |
T cell | 1.35e-13 | 25 |
pro-T cell | 1.35e-13 | 25 |
hematopoietic stem cell | 4.91e-11 | 168 |
hematopoietic lineage restricted progenitor cell | 5.18e-11 | 120 |
hematopoietic cell | 5.45e-10 | 177 |
CD8-positive, alpha-beta T cell | 6.93e-10 | 11 |
hematopoietic oligopotent progenitor cell | 4.07e-08 | 161 |
hematopoietic multipotent progenitor cell | 4.07e-08 | 161 |
CD4-positive, alpha-beta T cell | 5.11e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.02e-22 | 114 |
neural tube | 4.16e-09 | 56 |
neural rod | 4.16e-09 | 56 |
future spinal cord | 4.16e-09 | 56 |
neural keel | 4.16e-09 | 56 |
regional part of nervous system | 2.58e-08 | 53 |
regional part of brain | 2.58e-08 | 53 |
regional part of forebrain | 1.57e-07 | 41 |
forebrain | 1.57e-07 | 41 |
anterior neural tube | 1.57e-07 | 41 |
future forebrain | 1.57e-07 | 41 |