FFCP PHASE1:Hg19::chr16:56672571..56672587,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4489 | |EntrezGene=4489 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7393 | |HGNC=7393 | ||
|TSSclassifier=strong | |||
|UniProt=P04731 | |UniProt=P04731 | ||
|association_with_transcript=0bp_to_ENST00000290705,NM_005946,uc002ejq.2_5end | |association_with_transcript=0bp_to_ENST00000290705,NM_005946,uc002ejq.2_5end | ||
|cluster_id=chr16:56672571..56672587,+ | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_2_at_MT1A_5end | |description=CAGE_peak_2_at_MT1A_5end | ||
|id=chr16:56672571..56672587,+ | |id=chr16:56672571..56672587,+ | ||
|ontology_enrichment_celltype=CL:0000680!1.29e-09!57;CL:0000056!1.29e-09!57;CL:0000355!1.29e-09!57;CL:0000183!1.70e-09!59;CL:0000222!5.06e-09!119;CL:0000187!1.64e-08!54;CL:1000449!3.13e-07!16;CL:0000136!3.41e-07!15;CL:0000393!7.37e-07!60;CL:0000211!7.37e-07!60;CL:1000497!9.24e-07!18;CL:0002518!9.24e-07!18 | |ontology_enrichment_celltype=CL:0000680!1.29e-09!57;CL:0000056!1.29e-09!57;CL:0000355!1.29e-09!57;CL:0000183!1.70e-09!59;CL:0000222!5.06e-09!119;CL:0000187!1.64e-08!54;CL:1000449!3.13e-07!16;CL:0000136!3.41e-07!15;CL:0000393!7.37e-07!60;CL:0000211!7.37e-07!60;CL:1000497!9.24e-07!18;CL:0002518!9.24e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:1000449;6.48e-08;15!CL:0000136;1.33e-07;13!CL:1000497;1.85e-07;17!CL:0002518;1.85e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.61e-09,58;CL:0000056,1.61e-09,58;CL:0000355,1.61e-09,58;CL:0000222,1.67e-09,121;CL:0000187,2.22e-08,55;CL:1000449,6.92e-08,15;CL:0000136,1.56e-07,15;CL:1000497,1.95e-07,17;CL:0002518,1.95e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!6.08e-42!312;UBERON:0000483!9.49e-41!309;UBERON:0004111!1.65e-31!241;UBERON:0000025!4.09e-31!194;UBERON:0000481!1.64e-30!347;UBERON:0000477!3.39e-30!286;UBERON:0000475!9.90e-30!365;UBERON:0007023!1.79e-26!115;UBERON:0005256!4.50e-20!143;UBERON:0003914!5.99e-19!118;UBERON:0002100!8.54e-19!216;UBERON:0000468!2.01e-18!659;UBERON:0000467!2.49e-18!625;UBERON:0000490!4.37e-18!138;UBERON:0000480!4.82e-18!626;UBERON:0000923!1.52e-15!604;UBERON:0005291!1.52e-15!604;UBERON:0006598!1.52e-15!604;UBERON:0002532!1.52e-15!604;UBERON:0002050!1.62e-15!605;UBERON:0005423!1.62e-15!605;UBERON:0000922!1.92e-15!612;UBERON:0003104!6.74e-15!238;UBERON:0009142!6.74e-15!238;UBERON:0003075!2.84e-14!86;UBERON:0007284!2.84e-14!86;UBERON:0000064!4.66e-13!219;UBERON:0001049!5.82e-13!57;UBERON:0005068!5.82e-13!57;UBERON:0006241!5.82e-13!57;UBERON:0007135!5.82e-13!57;UBERON:0002616!1.92e-12!59;UBERON:0004290!2.97e-12!70;UBERON:0002346!3.60e-12!90;UBERON:0002385!2.27e-11!63;UBERON:0001015!2.27e-11!63;UBERON:0000383!2.27e-11!63;UBERON:0000914!2.55e-11!83;UBERON:0002329!2.55e-11!83;UBERON:0003077!2.55e-11!83;UBERON:0003059!2.55e-11!83;UBERON:0007282!2.55e-11!83;UBERON:0009618!2.55e-11!83;UBERON:0007285!2.55e-11!83;UBERON:0000486!2.93e-11!82;UBERON:0002049!3.40e-11!79;UBERON:0007798!3.40e-11!79;UBERON:0001134!9.55e-11!61;UBERON:0002036!9.55e-11!61;UBERON:0003082!9.55e-11!61;UBERON:0009569!4.35e-10!113;UBERON:0003056!5.54e-10!61;UBERON:0000466!8.77e-10!126;UBERON:0000033!1.58e-09!123;UBERON:0000055!3.51e-09!69;UBERON:0000153!5.73e-09!129;UBERON:0007811!5.73e-09!129;UBERON:0003080!5.77e-09!42;UBERON:0002417!5.90e-09!61;UBERON:0000916!5.90e-09!61;UBERON:0000955!8.90e-09!69;UBERON:0006238!8.90e-09!69;UBERON:0003103!1.06e-08!69;UBERON:0001981!1.50e-08!60;UBERON:0007500!1.50e-08!60;UBERON:0004537!1.50e-08!60;UBERON:0006965!1.50e-08!60;UBERON:0004872!1.60e-08!84;UBERON:0002780!1.88e-08!41;UBERON:0001890!1.88e-08!41;UBERON:0006240!1.88e-08!41;UBERON:0000479!2.14e-08!787;UBERON:0000062!3.55e-08!511;UBERON:0005743!3.85e-08!86;UBERON:0005177!4.44e-08!107;UBERON:0005172!9.76e-08!55;UBERON:0005173!9.76e-08!55;UBERON:0001017!1.03e-07!82;UBERON:0000080!1.20e-07!18;UBERON:0002120!1.20e-07!18;UBERON:0004875!1.20e-07!18;UBERON:0005721!1.20e-07!18;UBERON:0005754!1.20e-07!18;UBERON:0007297!1.20e-07!18;UBERON:0006555!1.28e-07!17;UBERON:0005103!1.28e-07!17;UBERON:0000083!1.28e-07!17;UBERON:0009201!1.28e-07!17;UBERON:0004819!1.28e-07!17;UBERON:0006553!1.28e-07!17;UBERON:0003074!1.28e-07!17;UBERON:0003060!1.28e-07!17;UBERON:0004211!3.13e-07!16;UBERON:0001285!3.13e-07!16;UBERON:0007684!3.13e-07!16;UBERON:0003220!3.13e-07!16;UBERON:0004208!3.13e-07!16;UBERON:0000073!3.91e-07!94;UBERON:0001016!3.91e-07!94;UBERON:0001009!4.07e-07!113;UBERON:0004121!4.50e-07!169;UBERON:0003887!5.80e-07!21;UBERON:0004876!6.61e-07!20;UBERON:0000464!7.13e-07!104;UBERON:0002020!9.52e-07!34;UBERON:0003528!9.52e-07!34 | |ontology_enrichment_uberon=UBERON:0000119!6.08e-42!312;UBERON:0000483!9.49e-41!309;UBERON:0004111!1.65e-31!241;UBERON:0000025!4.09e-31!194;UBERON:0000481!1.64e-30!347;UBERON:0000477!3.39e-30!286;UBERON:0000475!9.90e-30!365;UBERON:0007023!1.79e-26!115;UBERON:0005256!4.50e-20!143;UBERON:0003914!5.99e-19!118;UBERON:0002100!8.54e-19!216;UBERON:0000468!2.01e-18!659;UBERON:0000467!2.49e-18!625;UBERON:0000490!4.37e-18!138;UBERON:0000480!4.82e-18!626;UBERON:0000923!1.52e-15!604;UBERON:0005291!1.52e-15!604;UBERON:0006598!1.52e-15!604;UBERON:0002532!1.52e-15!604;UBERON:0002050!1.62e-15!605;UBERON:0005423!1.62e-15!605;UBERON:0000922!1.92e-15!612;UBERON:0003104!6.74e-15!238;UBERON:0009142!6.74e-15!238;UBERON:0003075!2.84e-14!86;UBERON:0007284!2.84e-14!86;UBERON:0000064!4.66e-13!219;UBERON:0001049!5.82e-13!57;UBERON:0005068!5.82e-13!57;UBERON:0006241!5.82e-13!57;UBERON:0007135!5.82e-13!57;UBERON:0002616!1.92e-12!59;UBERON:0004290!2.97e-12!70;UBERON:0002346!3.60e-12!90;UBERON:0002385!2.27e-11!63;UBERON:0001015!2.27e-11!63;UBERON:0000383!2.27e-11!63;UBERON:0000914!2.55e-11!83;UBERON:0002329!2.55e-11!83;UBERON:0003077!2.55e-11!83;UBERON:0003059!2.55e-11!83;UBERON:0007282!2.55e-11!83;UBERON:0009618!2.55e-11!83;UBERON:0007285!2.55e-11!83;UBERON:0000486!2.93e-11!82;UBERON:0002049!3.40e-11!79;UBERON:0007798!3.40e-11!79;UBERON:0001134!9.55e-11!61;UBERON:0002036!9.55e-11!61;UBERON:0003082!9.55e-11!61;UBERON:0009569!4.35e-10!113;UBERON:0003056!5.54e-10!61;UBERON:0000466!8.77e-10!126;UBERON:0000033!1.58e-09!123;UBERON:0000055!3.51e-09!69;UBERON:0000153!5.73e-09!129;UBERON:0007811!5.73e-09!129;UBERON:0003080!5.77e-09!42;UBERON:0002417!5.90e-09!61;UBERON:0000916!5.90e-09!61;UBERON:0000955!8.90e-09!69;UBERON:0006238!8.90e-09!69;UBERON:0003103!1.06e-08!69;UBERON:0001981!1.50e-08!60;UBERON:0007500!1.50e-08!60;UBERON:0004537!1.50e-08!60;UBERON:0006965!1.50e-08!60;UBERON:0004872!1.60e-08!84;UBERON:0002780!1.88e-08!41;UBERON:0001890!1.88e-08!41;UBERON:0006240!1.88e-08!41;UBERON:0000479!2.14e-08!787;UBERON:0000062!3.55e-08!511;UBERON:0005743!3.85e-08!86;UBERON:0005177!4.44e-08!107;UBERON:0005172!9.76e-08!55;UBERON:0005173!9.76e-08!55;UBERON:0001017!1.03e-07!82;UBERON:0000080!1.20e-07!18;UBERON:0002120!1.20e-07!18;UBERON:0004875!1.20e-07!18;UBERON:0005721!1.20e-07!18;UBERON:0005754!1.20e-07!18;UBERON:0007297!1.20e-07!18;UBERON:0006555!1.28e-07!17;UBERON:0005103!1.28e-07!17;UBERON:0000083!1.28e-07!17;UBERON:0009201!1.28e-07!17;UBERON:0004819!1.28e-07!17;UBERON:0006553!1.28e-07!17;UBERON:0003074!1.28e-07!17;UBERON:0003060!1.28e-07!17;UBERON:0004211!3.13e-07!16;UBERON:0001285!3.13e-07!16;UBERON:0007684!3.13e-07!16;UBERON:0003220!3.13e-07!16;UBERON:0004208!3.13e-07!16;UBERON:0000073!3.91e-07!94;UBERON:0001016!3.91e-07!94;UBERON:0001009!4.07e-07!113;UBERON:0004121!4.50e-07!169;UBERON:0003887!5.80e-07!21;UBERON:0004876!6.61e-07!20;UBERON:0000464!7.13e-07!104;UBERON:0002020!9.52e-07!34;UBERON:0003528!9.52e-07!34 | ||
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|phase1_expression=6.35874327446948,10.2768251467672,147.720215492578,23.01685862122,153.30765538856,6.97870819280295,27.8629865985142,60.0133879755489,30.5587184993811,99.0307764101081,24.423040879035,2.62129646556207,4.22027165165526,0.866364470720326,0.994192127183747,3.36162573225888,1.80808358407193,6.57279081348636,1.46379839637152,11.0808952269109,19.9920677419368,0.940364164434263,0,1.36874425072884,0.502170558379211,0,0,0,0,0,0.154816123316076,2.75826367343678,2.409647350226,1.84877005083394,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0.898893937780338,0,0,1.27867425159808,0,0,0,0,0,0,0,0,0.217188844705117,3.02699751316684,0,1.89877432464531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,22.13312837022,3.83587685530591,9.75885711438329,2.50668955317945,4.34539556882471,3.1811437882044,2.43317435151318,2.74150969775797,5.98669373148923,6.0606002128257,4.6497571801688,4.00724817121796,2.96627554227544,0.324547393654683,0.174129737299267,0,0,0,0,12.124506849369,31.8286800189266,15.9684630739493,5.08777147731609,9.64848703282784,26.4113320262465,10.4497483268405,2.84258435086262,1.42306505074684,2.00832367658802,16.1131726843659,14.4451700086517,0.976248230192678,56.2524512929179,8.91156142669936,14.8237548951572,11.4509980039347,15.0899383847652,6.13266549863533,10.4419222552494,4.946447086121,1.31780417436063,0,5.23312862571041,0,13.0429427014517,1.19168262731897,1.43418310374407,10.2853830837524,0.560677600142307,0,3.45334567784024,1.24484414159907,1.48181739276657,5.5577047058576,4.99479511228274,2.88087962239999,2.34321431833797,64.9292959807067,168.289187355613,51.4103461098196,12.5654913548828,3.56120477609889,2.66856532734272,67.3708765141148,42.7463424244953,23.8682554516018,1.18800285728205,0.741800787835671,216.61840414125,74.0176686070726,7.07011678607078,5.12985931475053,62.6164900994253,3.95079858792754,3.98434134538726,0.901428353439581,6.12533789064114,0.89694817844431,0.427114777637135,3.17897851739343,3.60109315301283,8.96557004374418,0.772921620136887,2.60563598864226,1.68776332241266,3.50773218580315,0.504867548488229,1.19664868234989,2.42469085228218,0,0.705264687593482,1.18692414617341,1.54608682530637,0.545492241181669,2.29443676311203,0.609868530647977,0.265059536642971,0.464775771478074,0.207322110030741,0.504641701751257,4.37972830890996,4.69348596989448,0.643240938192885,9.66944449467364,9.75172648867156,15.1594691150613,0,0,0,0,0,0,0,0,0,0.738155454624648,7.01208869017229,9.8777762719536,11.7606969108434,422.094265956697,555.297377422859,425.368732810611,0,5.53447973444011,56.788945208812,1.42675371031213,1.1240175325762,0.402115889646523,3.14800713539001,2.93227474779292,195.507739632561,53.4025965493511,0.695582429850461,3.75707821554629,14.1479118805852,16.2044929401814,2.85381228351897,0,0,0,1.40402559083543,0.891786973732369,0,1.00789276919316,1.27597587518148,0.53735113621709,1.74380363108377,0,0,0,3.10992173311158,10.0883967391873,0.37872730027914,3.17489471460845,1.52795370223311,4.68869788840188,3.4214489204541,2.36503233217644,0.300343057843917,0,19.6229397604381,15.2586024091648,17.0878205962814,2.58543431515556,221.746996428167,344.883523042848,0.26593811658487,1.04007436911366,75.1045532845455,21.2773698034917,62.8756342477995,43.4653100720769,8.13932408087165,69.1521882895846,254.725696117701,26.2990042069484,430.821818875785,2.41151501647669,1.74306691720059,1.29964888536674,0,0,0,0.239624855491583,0,17.1164286048862,34.6027322935514,40.8897881875263,59.985422685365,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,2.33113834266366,4.50153468953709,1.35632511849868,1.03985430765404,1.24900292158013,1.10391690523754,0.819989904948992,0.601892199455438,0,7.24311499047534,1.32845119707087,1.47495334833363,7.81952530212746,8.61525092836058,2.05886054286514,0,0,0,1.21251028578504,14.9791895559447,1.5119514666484,2.48107807818777,0.61384789315225,0.561320188866147,3.97231362692673,2.55853624533352,4.02134802859019,13.3576259800492,55.515489768956,32.4937957323023,74.3250761924973,29.5975024634664,49.3894108454827,2.90062679019893,0.601519410909855,0.184161977871793,13.0888470907652,7.10155555226196,2.09799063935079,46.4735601294634,64.9239291790216,36.8644391513122,51.1487286286412,96.4741888080884,13.6480060885076,21.2617131595645,19.0006006169883,9.25363516141736,32.5135725052623,17.5591420849199,145.279475635672,80.6143728660863,55.0731896616559,0,0,6.92415337814251,1.31205858279882,5.53143270929315,49.4596855909067,0,0,2.87132768998086,1.30012049207304,0,2.32009723901093,73.1730931294561,87.4970945938938,80.0830486135123,68.4266959810903,69.4629963849155,35.7951835147624,0.801288320820636,1.4875642382488,0.768760269460425,1.78657797492418,0.4046311234222,16.269594225405,1.25924938732256,5.5762981612848,4.00443654228915,10.6461206063404,12.179061889051,5.00375391580584,1.5743737541619,7.81532575655301,5.69482964493707,4.38449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| ||
|short_description=p2@MT1A | |short_description=p2@MT1A | ||
}} | }} |
Latest revision as of 02:08, 17 September 2015
Short description: | p2@MT1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MT1A_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | 0bp_to_ENST00000290705, NM_005946, uc002ejq.2_5end |
EntrezGene: | MT1A |
HGNC: | 7393 |
UniProt: | P04731 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.61e-09 | 58 |
myoblast | 1.61e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.61e-09 | 58 |
mesodermal cell | 1.67e-09 | 121 |
muscle cell | 2.22e-08 | 55 |
epithelial cell of nephron | 6.92e-08 | 15 |
fat cell | 1.56e-07 | 15 |
kidney cell | 1.95e-07 | 17 |
kidney epithelial cell | 1.95e-07 | 17 |