FFCP PHASE1:Hg19::chr16:3615461..3615469,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=197358 | |EntrezGene=197358 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29889 | |HGNC=29889 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-422bp_to_BC169295_5end | |association_with_transcript=-422bp_to_BC169295_5end | ||
|cluster_id=chr16:3615461..3615469,- | |||
|description=CAGE_peak_3_at_NLRC3_5end | |description=CAGE_peak_3_at_NLRC3_5end | ||
|id=chr16:3615461..3615469,- | |id=chr16:3615461..3615469,- | ||
|ontology_enrichment_celltype=CL:0000838!6.60e-26!52;CL:0000542!3.32e-25!53;CL:0000051!3.32e-25!53;CL:0000988!1.84e-18!182;CL:0000037!5.57e-18!172;CL:0000566!5.57e-18!172;CL:0002032!8.33e-17!165;CL:0000837!8.33e-17!165;CL:0000738!6.44e-16!140;CL:0002087!2.20e-13!119;CL:0000084!2.61e-13!25;CL:0000827!2.61e-13!25;CL:0002031!3.69e-13!124;CL:0000791!4.66e-12!18;CL:0000789!4.66e-12!18;CL:0002420!4.66e-12!18;CL:0002419!4.66e-12!18;CL:0000790!4.66e-12!18;CL:0000945!3.11e-10!24;CL:0000826!3.11e-10!24;CL:0000625!3.23e-08!11 | |ontology_enrichment_celltype=CL:0000838!6.60e-26!52;CL:0000542!3.32e-25!53;CL:0000051!3.32e-25!53;CL:0000988!1.84e-18!182;CL:0000037!5.57e-18!172;CL:0000566!5.57e-18!172;CL:0002032!8.33e-17!165;CL:0000837!8.33e-17!165;CL:0000738!6.44e-16!140;CL:0002087!2.20e-13!119;CL:0000084!2.61e-13!25;CL:0000827!2.61e-13!25;CL:0002031!3.69e-13!124;CL:0000791!4.66e-12!18;CL:0000789!4.66e-12!18;CL:0002420!4.66e-12!18;CL:0002419!4.66e-12!18;CL:0000790!4.66e-12!18;CL:0000945!3.11e-10!24;CL:0000826!3.11e-10!24;CL:0000625!3.23e-08!11 | ||
|ontology_enrichment_celltype_v019=CL:0000623;5.34e-17;3!CL:0002591;3.56e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,5.22e-17,3;CL:0000825,5.22e-17,3;CL:0002591,3.78e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!4.30e-16!15;UBERON:0000179!4.30e-16!15;UBERON:0000463!4.30e-16!15 | |ontology_enrichment_uberon=UBERON:0000178!4.30e-16!15;UBERON:0000179!4.30e-16!15;UBERON:0000463!4.30e-16!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.73e-17;15!UBERON:0000179;1.73e-17;15!UBERON:0000463;1.73e-17;15!UBERON:0002390;3.09e-07;32!UBERON:0002372;8.72e-07;1!UBERON:0001961;8.72e-07;1!UBERON:0001744;8.72e-07;1!UBERON:0001042;8.72e-07;1!UBERON:0001735;8.72e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.03e-17,15;UBERON:0000179,2.03e-17,15;UBERON:0000463,2.03e-17,15 | |||
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| ||
|short_description=p3@NLRC3 | |short_description=p3@NLRC3 | ||
}} | }} |
Latest revision as of 14:54, 16 September 2015
Short description: | p3@NLRC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NLRC3_5end |
Coexpression cluster: | NA |
Association with transcript: | -422bp_to_BC169295_5end |
EntrezGene: | NLRC3 |
HGNC: | 29889 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 5.22e-17 | 3 |
pro-NK cell | 5.22e-17 | 3 |
smooth muscle cell of the pulmonary artery | 3.78e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 2.03e-17 | 15 |
haemolymphatic fluid | 2.03e-17 | 15 |
organism substance | 2.03e-17 | 15 |