FFCP PHASE1:Hg19::chr9:90345922..90345945,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:90345922..90345945,+ | |||
|coexpression_cluster_id=C667 | |||
|description=CAGE_peak_at_chr9:90345922..90345945,+ | |description=CAGE_peak_at_chr9:90345922..90345945,+ | ||
|id=chr9:90345922..90345945,+ | |id=chr9:90345922..90345945,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.88e-20!42;CL:0002194!2.50e-18!63;CL:0000576!2.50e-18!63;CL:0000040!2.50e-18!63;CL:0000559!2.50e-18!63;CL:0000860!5.73e-18!45;CL:0002009!2.56e-17!65;CL:0000839!4.35e-16!70;CL:0000557!1.17e-14!71;CL:0000766!8.46e-13!76 | |ontology_enrichment_celltype=CL:0002057!3.88e-20!42;CL:0002194!2.50e-18!63;CL:0000576!2.50e-18!63;CL:0000040!2.50e-18!63;CL:0000559!2.50e-18!63;CL:0000860!5.73e-18!45;CL:0002009!2.56e-17!65;CL:0000839!4.35e-16!70;CL:0000557!1.17e-14!71;CL:0000766!8.46e-13!76 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.17e-54;33!CL:0002057;2.17e-54;33!CL:0000473;1.97e-47;39!CL:0000234;1.97e-47;39!CL:0000576;9.82e-25;48!CL:0000766;1.40e-19;69!CL:0000763;5.56e-08;100!CL:0000235;1.20e-07;6!CL:0000135;4.75e-07;3!CL:0000388;4.75e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.08e-52,48;CL:0000234,2.08e-52,48;CL:0000860,7.28e-46,42;CL:0002057,7.28e-46,42;CL:0002194,8.58e-41,59;CL:0000576,8.58e-41,59;CL:0000040,8.58e-41,59;CL:0000559,8.58e-41,59;CL:0002009,2.71e-39,61;CL:0000839,6.13e-36,66;CL:0000557,2.51e-35,67;CL:0000766,1.61e-32,72;CL:0000763,6.44e-20,108;CL:0000049,6.44e-20,108;CL:0002087,2.23e-18,115;CL:0002031,2.18e-17,120;CL:0000738,1.04e-14,136;CL:0002320,3.65e-12,361;CL:0000134,1.22e-11,354;CL:0002032,1.35e-11,161;CL:0000837,1.35e-11,161;CL:0000037,6.84e-11,168;CL:0000988,4.55e-10,177;CL:0000219,6.22e-10,386;CL:0000048,4.67e-09,427;CL:0000723,8.06e-09,433;CL:0000034,1.63e-08,441;CL:0000235,9.25e-08,6;CL:0000135,2.89e-07,3;CL:0000388,2.89e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.12e-32;42!CL:0000049;3.66e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.40e-14!80;UBERON:0001474!5.68e-13!86;UBERON:0004765!2.41e-12!101;UBERON:0001434!2.41e-12!101;UBERON:0002204!3.54e-09!167;UBERON:0002390!1.28e-08!102;UBERON:0003061!1.28e-08!102;UBERON:0002405!1.11e-07!115;UBERON:0002193!3.89e-07!112 | |ontology_enrichment_uberon=UBERON:0002371!4.40e-14!80;UBERON:0001474!5.68e-13!86;UBERON:0004765!2.41e-12!101;UBERON:0001434!2.41e-12!101;UBERON:0002204!3.54e-09!167;UBERON:0002390!1.28e-08!102;UBERON:0003061!1.28e-08!102;UBERON:0002405!1.11e-07!115;UBERON:0002193!3.89e-07!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;4.75e-07;3!UBERON:0000043;4.75e-07;3!UBERON:0007845;4.75e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.55e-30,76;UBERON:0001474,6.41e-28,82;UBERON:0004765,3.16e-27,90;UBERON:0001434,3.78e-26,100;UBERON:0002405,5.42e-24,93;UBERON:0002390,1.70e-22,98;UBERON:0003061,1.70e-22,98;UBERON:0002193,6.44e-20,108;UBERON:0002204,6.67e-19,167;UBERON:0000926,7.00e-12,315;UBERON:0004120,7.00e-12,315;UBERON:0006603,7.00e-12,315;UBERON:0002384,1.27e-11,371;UBERON:0003081,6.26e-11,203;UBERON:0007846,2.89e-07,3;UBERON:0000043,2.89e-07,3;UBERON:0007845,2.89e-07,3 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,1.0007329835313,0,0,0,0,0.522371256399677,0,0,0,0,0.123766352960047,0.331397375727916,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0.581592955118259,1.13362783106643,0.727752183563449,0.929716147622738,2.87817521615278,1.54853185447552,5.75384784644301,6.66017836975662,0.945928919554341,1.03423704220986,0.645484683583826,0,1.50593871634084,6.27684145133045,1.12361742222542,2.14258724659632,1.92557416245656,3.19668562899521,2.30895910130701,6.98122801675712,4.68847225585964,0.870627715885752,1.13477044938228,1.24564449799115,8.54245461872927,6.77927793946262,3.25783267057675,0.605399502633369,1.10483290796269,0.316462387440884,0.211255286311942,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.434539556882471,0,0,0,0.443458794925128,0.087834785693126,0,0.364295288292542,0.370784442784429,0,0,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0.860509862246441,1.06400514659507,0,0,0,0,0,0.163461903113459,0,0,0,0.936480230490962,0,0.298897361103602,0,0,0.140450806702248,0.204154171254893,0,0.103325781175765,0,0.494533858557114,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0.211931901159562,0,0,0,0.18611685633159,0,0,0,0.0920498986422993,0,0.710019185033229,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0.236613600079688,0,0,0.110293972732394,0,0,0.404493924480493,0.196221465125346,0.769494313892781,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.891786973732369,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0.411309970813294,0.600686115687835,0,0.112131084345361,0,0.1466765716419,0,0,0.845302752556,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,1.2162378064119,1.50677127429638,4.21667878966063,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00034104211935,0,0.623912584592421,0,0.157702415033935,0,0,2.27407504055985,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0.128139149255701,0,0.160853921143607,0,0.308419387605311,1.06537035187876,0.0821271560138091,0,1.27831416305955,0.241718899183244,0,0.368323955743585,0,0.182091168006717,1.31124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.307007349452259,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0.2023155617111,0,0.62962469366128,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,1.05650146756755,0.136499911407986,0.707027159768564,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,1.26664581178598,0.987884678879706,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0.284136146806413,0,0.296964680832639,0,0,0,0,0.16480387422676,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0.724999575434793,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0.46112780877612,0.0897576444097721,0.108647371922008,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0.173559738335131,0,0,0,0.51595809741485,0,0,0,0,0,0.225980740780532,0,0.19871461170299,0,0,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0.121499113316049,0,0.157611414598396,0,0,2.33073541132698,0,0.714695326373367,0,0,1.08599920350743,0,0.326587360109409,0,0.082092520749339,0,0.113312091520126,0,0,0,0,0.171086837884329,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0.151649117541648,0.285465333544967,0.235265819698172,0,0,0.895528817321244,0,0.554805861502613,0.189403005275089,0.754703705257725,0.889811221596536,0,0.604923695052956,0.310874401165561,0.887130899937803,0,0.449803112163605,0,1.65882483136342,0,0,0.150257608997218,0,0.813741466409323,0,0.107410557042488,0.928067519756987,1.19428766609585,0,0,0,0,0.385239660814607,0.214441591374926,0.260994291965212,0,0,0.244736704506468,0,0,0,0.176689145945881,0,0,0,0,0.303859956177382,0,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,1.10463570151104,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0.159633859057151,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0.127762427639595,0.535701835878287,0,0.606965604236632,0,0.0887023701626388,0,0.171488009437418,0,0,0.236387681767936,0,0,0,0,0.913158720509496,0,0.47775168788705,0,0,0.116241425368125,0,0.801711364730253,0,0.17071847709395,0,0,0,0.170426809518315,0,0.22910686854405,0.31020638566432,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0.118920090777569,0,0,0.150962843566674,0,0.2185595605039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|phase1_expression=0,0.214100523890983,0.140954404095971,1.0007329835313,0,0,0,0,0.522371256399677,0,0,0,0,0.123766352960047,0.331397375727916,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0.581592955118259,1.13362783106643,0.727752183563449,0.929716147622738,2.87817521615278,1.54853185447552,5.75384784644301,6.66017836975662,0.945928919554341,1.03423704220986,0.645484683583826,0,1.50593871634084,6.27684145133045,1.12361742222542,2.14258724659632,1.92557416245656,3.19668562899521,2.30895910130701,6.98122801675712,4.68847225585964,0.870627715885752,1.13477044938228,1.24564449799115,8.54245461872927,6.77927793946262,3.25783267057675,0.605399502633369,1.10483290796269,0.316462387440884,0.211255286311942,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.434539556882471,0,0,0,0.443458794925128,0.087834785693126,0,0.364295288292542,0.370784442784429,0,0,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0.860509862246441,1.06400514659507,0,0,0,0,0,0.163461903113459,0,0,0,0.936480230490962,0,0.298897361103602,0,0,0.140450806702248,0.204154171254893,0,0.103325781175765,0,0.494533858557114,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0.211931901159562,0,0,0,0.18611685633159,0,0,0,0.0920498986422993,0,0.710019185033229,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0.236613600079688,0,0,0.110293972732394,0,0,0.404493924480493,0.196221465125346,0.769494313892781,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.891786973732369,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0.411309970813294,0.600686115687835,0,0.112131084345361,0,0.1466765716419,0,0,0.845302752556,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,1.2162378064119,1.50677127429638,4.21667878966063,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00034104211935,0,0.623912584592421,0,0.157702415033935,0,0,2.27407504055985,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0.128139149255701,0,0.160853921143607,0,0.308419387605311,1.06537035187876,0.0821271560138091,0,1.27831416305955,0.241718899183244,0,0.368323955743585,0,0.182091168006717,1.31124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.307007349452259,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0.2023155617111,0,0.62962469366128,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,1.05650146756755,0.136499911407986,0.707027159768564,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,1.26664581178598,0.987884678879706,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0.284136146806413,0,0.296964680832639,0,0,0,0,0.16480387422676,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0.724999575434793,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0.46112780877612,0.0897576444097721,0.108647371922008,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0.173559738335131,0,0,0,0.51595809741485,0,0,0,0,0,0.225980740780532,0,0.19871461170299,0,0,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0.121499113316049,0,0.157611414598396,0,0,2.33073541132698,0,0.714695326373367,0,0,1.08599920350743,0,0.326587360109409,0,0.082092520749339,0,0.113312091520126,0,0,0,0,0.171086837884329,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0.151649117541648,0.285465333544967,0.235265819698172,0,0,0.895528817321244,0,0.554805861502613,0.189403005275089,0.754703705257725,0.889811221596536,0,0.604923695052956,0.310874401165561,0.887130899937803,0,0.449803112163605,0,1.65882483136342,0,0,0.150257608997218,0,0.813741466409323,0,0.107410557042488,0.928067519756987,1.19428766609585,0,0,0,0,0.385239660814607,0.214441591374926,0.260994291965212,0,0,0.244736704506468,0,0,0,0.176689145945881,0,0,0,0,0.303859956177382,0,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,1.10463570151104,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0.159633859057151,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0.127762427639595,0.535701835878287,0,0.606965604236632,0,0.0887023701626388,0,0.171488009437418,0,0,0.236387681767936,0,0,0,0,0.913158720509496,0,0.47775168788705,0,0,0.116241425368125,0,0.801711364730253,0,0.17071847709395,0,0,0,0.170426809518315,0,0.22910686854405,0.31020638566432,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0.118920090777569,0,0,0.150962843566674,0,0.2185595605039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| ||
|short_description=p@chr9:90345922..90345945,+ | |short_description=p@chr9:90345922..90345945,+ | ||
}} | }} |
Latest revision as of 03:15, 1 August 2015
Short description: | p@chr9:90345922..90345945, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:90345922..90345945, + |
Coexpression cluster: | C667_CD14_tenocyte_Synoviocyte_Smooth_dura_Preadipocyte_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.08e-52 | 48 |
phagocyte | 2.08e-52 | 48 |
classical monocyte | 7.28e-46 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.28e-46 | 42 |
monopoietic cell | 8.58e-41 | 59 |
monocyte | 8.58e-41 | 59 |
monoblast | 8.58e-41 | 59 |
promonocyte | 8.58e-41 | 59 |
macrophage dendritic cell progenitor | 2.71e-39 | 61 |
myeloid lineage restricted progenitor cell | 6.13e-36 | 66 |
granulocyte monocyte progenitor cell | 2.51e-35 | 67 |
myeloid leukocyte | 1.61e-32 | 72 |
myeloid cell | 6.44e-20 | 108 |
common myeloid progenitor | 6.44e-20 | 108 |
nongranular leukocyte | 2.23e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 2.18e-17 | 120 |
leukocyte | 1.04e-14 | 136 |
connective tissue cell | 3.65e-12 | 361 |
mesenchymal cell | 1.22e-11 | 354 |
hematopoietic oligopotent progenitor cell | 1.35e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.35e-11 | 161 |
hematopoietic stem cell | 6.84e-11 | 168 |
hematopoietic cell | 4.55e-10 | 177 |
motile cell | 6.22e-10 | 386 |
multi fate stem cell | 4.67e-09 | 427 |
somatic stem cell | 8.06e-09 | 433 |
stem cell | 1.63e-08 | 441 |
macrophage | 9.25e-08 | 6 |
fibrocyte | 2.89e-07 | 3 |
tendon cell | 2.89e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.55e-30 | 76 |
bone element | 6.41e-28 | 82 |
skeletal element | 3.16e-27 | 90 |
skeletal system | 3.78e-26 | 100 |
immune system | 5.42e-24 | 93 |
hematopoietic system | 1.70e-22 | 98 |
blood island | 1.70e-22 | 98 |
hemolymphoid system | 6.44e-20 | 108 |
musculoskeletal system | 6.67e-19 | 167 |
mesoderm | 7.00e-12 | 315 |
mesoderm-derived structure | 7.00e-12 | 315 |
presumptive mesoderm | 7.00e-12 | 315 |
connective tissue | 1.27e-11 | 371 |
lateral plate mesoderm | 6.26e-11 | 203 |
dense regular connective tissue | 2.89e-07 | 3 |
tendon | 2.89e-07 | 3 |
regular connective tissue | 2.89e-07 | 3 |