FFCP PHASE1:Hg19::chr16:29841250..29841261,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:29841250..29841261,+ | |||
|coexpression_cluster_id=C3557 | |||
|description=CAGE_peak_at_chr16:29841250..29841261,+ | |description=CAGE_peak_at_chr16:29841250..29841261,+ | ||
|id=chr16:29841250..29841261,+ | |id=chr16:29841250..29841261,+ | ||
|ontology_enrichment_celltype=CL:0000181!9.59e-16!12;CL:0000417!9.59e-16!12;CL:0000668!9.59e-16!12;CL:0000414!9.59e-16!12;CL:0000412!9.59e-16!12;CL:0000182!9.59e-16!12;CL:0000223!8.06e-13!59;CL:0002178!4.25e-08!3;CL:0002150!1.30e-07!3;CL:0000861!1.30e-07!3;CL:0000066!5.19e-07!254;CL:0000313!6.08e-07!1 | |ontology_enrichment_celltype=CL:0000181!9.59e-16!12;CL:0000417!9.59e-16!12;CL:0000668!9.59e-16!12;CL:0000414!9.59e-16!12;CL:0000412!9.59e-16!12;CL:0000182!9.59e-16!12;CL:0000223!8.06e-13!59;CL:0002178!4.25e-08!3;CL:0002150!1.30e-07!3;CL:0000861!1.30e-07!3;CL:0000066!5.19e-07!254;CL:0000313!6.08e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000313;4.10e-23;1!CL:0000159;2.90e-12;2!CL:0002231;9.31e-09;3!CL:0000182;2.51e-08;12!CL:0002563;9.10e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,5.13e-23,1;CL:0000159,3.24e-12,2;CL:0002231,8.31e-09,3;CL:0000182,2.46e-08,12;CL:0002563,8.14e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.12e-15!106;DOID:3493!4.19e-12!2;DOID:0050687!7.86e-12!143;DOID:299!7.79e-10!25;DOID:2152!6.08e-07!1 | |ontology_enrichment_disease=DOID:305!1.12e-15!106;DOID:3493!4.19e-12!2;DOID:0050687!7.86e-12!143;DOID:299!7.79e-10!25;DOID:2152!6.08e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:2152;4.10e-23;1!DOID:3493;1.75e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,5.13e-23,1;DOID:3493,1.85e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0004921!1.60e-18!129;UBERON:0004185!1.60e-18!129;UBERON:0000077!5.08e-15!130;UBERON:0008835!1.36e-14!22;UBERON:0003894!1.36e-14!22;UBERON:0001007!1.46e-14!155;UBERON:0001555!1.46e-14!155;UBERON:0007026!1.46e-14!155;UBERON:0004119!3.03e-14!169;UBERON:0000925!3.03e-14!169;UBERON:0006595!3.03e-14!169;UBERON:0009854!6.65e-14!23;UBERON:0001041!1.35e-13!98;UBERON:0002107!4.19e-13!19;UBERON:0006925!4.19e-13!19;UBERON:0008836!4.19e-13!19;UBERON:0007499!1.08e-12!25;UBERON:0009497!1.08e-12!25;UBERON:0000015!1.08e-12!25;UBERON:0002423!1.08e-12!25;UBERON:0006235!1.08e-12!25;UBERON:0004161!1.08e-12!25;UBERON:0009856!3.72e-12!26;UBERON:0005409!1.22e-10!35;UBERON:0003929!3.99e-10!54;UBERON:0005911!5.25e-10!82;UBERON:0005057!2.50e-09!26;UBERON:0000160!1.29e-08!27;UBERON:0000466!1.67e-08!126;UBERON:0000949!3.59e-08!45;UBERON:0005177!6.12e-08!107;UBERON:0002365!1.13e-07!31;UBERON:0002330!1.13e-07!31;UBERON:0001048!2.96e-07!168;UBERON:0004911!6.08e-07!1;UBERON:0003104!7.21e-07!238;UBERON:0009142!7.21e-07!238 | |ontology_enrichment_uberon=UBERON:0004921!1.60e-18!129;UBERON:0004185!1.60e-18!129;UBERON:0000077!5.08e-15!130;UBERON:0008835!1.36e-14!22;UBERON:0003894!1.36e-14!22;UBERON:0001007!1.46e-14!155;UBERON:0001555!1.46e-14!155;UBERON:0007026!1.46e-14!155;UBERON:0004119!3.03e-14!169;UBERON:0000925!3.03e-14!169;UBERON:0006595!3.03e-14!169;UBERON:0009854!6.65e-14!23;UBERON:0001041!1.35e-13!98;UBERON:0002107!4.19e-13!19;UBERON:0006925!4.19e-13!19;UBERON:0008836!4.19e-13!19;UBERON:0007499!1.08e-12!25;UBERON:0009497!1.08e-12!25;UBERON:0000015!1.08e-12!25;UBERON:0002423!1.08e-12!25;UBERON:0006235!1.08e-12!25;UBERON:0004161!1.08e-12!25;UBERON:0009856!3.72e-12!26;UBERON:0005409!1.22e-10!35;UBERON:0003929!3.99e-10!54;UBERON:0005911!5.25e-10!82;UBERON:0005057!2.50e-09!26;UBERON:0000160!1.29e-08!27;UBERON:0000466!1.67e-08!126;UBERON:0000949!3.59e-08!45;UBERON:0005177!6.12e-08!107;UBERON:0002365!1.13e-07!31;UBERON:0002330!1.13e-07!31;UBERON:0001048!2.96e-07!168;UBERON:0004911!6.08e-07!1;UBERON:0003104!7.21e-07!238;UBERON:0009142!7.21e-07!238 | ||
|ontology_enrichment_uberon_v019=UBERON:0004911;4.10e-23;1!UBERON:0004909;2.90e-12;2!UBERON:0001052;9.10e-07;4!UBERON:0001242;9.10e-07;4!UBERON:0001262;9.10e-07;4!UBERON:0004786;9.10e-07;4!UBERON:0004808;9.10e-07;4!UBERON:0001277;9.10e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,5.13e-23,1;UBERON:0004909,3.24e-12,2;UBERON:0003929,6.01e-07,54;UBERON:0005911,6.51e-07,82;UBERON:0001242,8.14e-07,4;UBERON:0001262,8.14e-07,4;UBERON:0004786,8.14e-07,4;UBERON:0004808,8.14e-07,4;UBERON:0001277,8.14e-07,4;UBERON:0001052,8.61e-07,4 | |||
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|short_description=p@chr16:29841250..29841261,+ | |short_description=p@chr16:29841250..29841261,+ | ||
}} | }} |
Latest revision as of 07:56, 25 July 2015
Short description: | p@chr16:29841250..29841261, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:29841250..29841261, + |
Coexpression cluster: | C3557_signet_Prostate_Intestinal_lung_colon_rectal_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 5.13e-23 | 1 |
seromucus secreting cell | 3.24e-12 | 2 |
epithelial cell of prostate | 8.31e-09 | 3 |
hepatocyte | 2.46e-08 | 12 |
intestinal epithelial cell | 8.14e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 5.13e-23 | 1 |
epithelium of gonad | 3.24e-12 | 2 |
gut epithelium | 6.01e-07 | 54 |
endo-epithelium | 6.51e-07 | 82 |
intestinal mucosa | 8.14e-07 | 4 |
wall of intestine | 8.14e-07 | 4 |
gastrointestinal system mucosa | 8.14e-07 | 4 |
gastrointestinal system epithelium | 8.14e-07 | 4 |
intestinal epithelium | 8.14e-07 | 4 |
rectum | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 5.13e-23 | 1 |
signet ring cell adenocarcinoma | 1.85e-12 | 2 |