FFCP PHASE1:Hg19::chr9:75785088..75785127,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:75785088..75785127,+ | |||
|coexpression_cluster_id=C827 | |||
|description=CAGE_peak_at_chr9:75785088..75785127,+ | |description=CAGE_peak_at_chr9:75785088..75785127,+ | ||
|id=chr9:75785088..75785127,+ | |id=chr9:75785088..75785127,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.13e-16!42;CL:0000557!1.31e-16!71;CL:0000860!4.44e-16!45;CL:0000839!2.06e-15!70;CL:0002009!7.06e-15!65;CL:0000766!2.54e-14!76;CL:0002194!2.59e-14!63;CL:0000576!2.59e-14!63;CL:0000040!2.59e-14!63;CL:0000559!2.59e-14!63;CL:0000063!7.01e-10!578;CL:0000548!1.08e-09!679;CL:0000004!1.08e-09!679;CL:0000255!1.08e-09!679;CL:0000012!1.17e-09!682;CL:0000763!4.15e-09!112;CL:0000049!4.15e-09!112;CL:0000048!4.62e-09!430;CL:0000723!4.89e-09!436;CL:0000144!9.14e-09!625;CL:0000034!2.88e-08!444;CL:0000134!3.17e-08!358;CL:0002371!7.51e-08!591;CL:0002320!1.20e-07!365 | |ontology_enrichment_celltype=CL:0002057!1.13e-16!42;CL:0000557!1.31e-16!71;CL:0000860!4.44e-16!45;CL:0000839!2.06e-15!70;CL:0002009!7.06e-15!65;CL:0000766!2.54e-14!76;CL:0002194!2.59e-14!63;CL:0000576!2.59e-14!63;CL:0000040!2.59e-14!63;CL:0000559!2.59e-14!63;CL:0000063!7.01e-10!578;CL:0000548!1.08e-09!679;CL:0000004!1.08e-09!679;CL:0000255!1.08e-09!679;CL:0000012!1.17e-09!682;CL:0000763!4.15e-09!112;CL:0000049!4.15e-09!112;CL:0000048!4.62e-09!430;CL:0000723!4.89e-09!436;CL:0000144!9.14e-09!625;CL:0000034!2.88e-08!444;CL:0000134!3.17e-08!358;CL:0002371!7.51e-08!591;CL:0002320!1.20e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.06e-39;33!CL:0002057;3.06e-39;33!CL:0000473;7.78e-30;39!CL:0000234;7.78e-30;39!CL:0000576;2.09e-18;48!CL:0000766;8.93e-13;69!CL:0002537;4.80e-08;5!CL:0000763;8.50e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.38e-33,42;CL:0002057,6.38e-33,42;CL:0000473,2.37e-31,48;CL:0000234,2.37e-31,48;CL:0000839,8.43e-24,66;CL:0000557,2.90e-23,67;CL:0002194,1.10e-22,59;CL:0000576,1.10e-22,59;CL:0000040,1.10e-22,59;CL:0000559,1.10e-22,59;CL:0000766,5.37e-22,72;CL:0002009,1.40e-21,61;CL:0000763,6.56e-15,108;CL:0000049,6.56e-15,108;CL:0002031,2.23e-09,120;CL:0000134,2.86e-09,354;CL:0002320,1.10e-08,361;CL:0002087,1.35e-08,115;CL:0000738,3.86e-08,136;CL:0000219,8.03e-08,386;CL:0000048,8.23e-08,427;CL:0000723,9.19e-08,433;CL:0002537,9.57e-08,5;CL:0000034,1.28e-07,441;CL:0002032,3.46e-07,161;CL:0000837,3.46e-07,161;CL:0000037,6.50e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;7.88e-26;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.20e-15!80;UBERON:0004765!1.74e-14!101;UBERON:0001434!1.74e-14!101;UBERON:0001474!2.56e-14!86;UBERON:0002204!6.43e-11!167;UBERON:0002193!1.11e-10!112;UBERON:0002390!2.77e-10!102;UBERON:0003061!2.77e-10!102;UBERON:0002405!2.60e-09!115;UBERON:0002384!4.58e-08!375 | |ontology_enrichment_uberon=UBERON:0002371!1.20e-15!80;UBERON:0004765!1.74e-14!101;UBERON:0001434!1.74e-14!101;UBERON:0001474!2.56e-14!86;UBERON:0002204!6.43e-11!167;UBERON:0002193!1.11e-10!112;UBERON:0002390!2.77e-10!102;UBERON:0003061!2.77e-10!102;UBERON:0002405!2.60e-09!115;UBERON:0002384!4.58e-08!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;3.41e-07;10!UBERON:0000158;3.41e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.49e-22,76;UBERON:0001474,2.43e-20,82;UBERON:0002405,2.64e-18,93;UBERON:0004765,2.07e-17,90;UBERON:0001434,3.63e-17,100;UBERON:0002390,4.44e-15,98;UBERON:0003061,4.44e-15,98;UBERON:0002193,7.13e-15,108;UBERON:0002204,2.44e-10,167;UBERON:0002384,8.53e-10,371;UBERON:0003081,1.38e-07,203 | |||
|phase1_expression=0.54503513781167,0.856402095563933,2.11431606143957,0,0.893922188854576,0,0,0,0,0,0,0,0,0.247532705920093,0,1.34465029290355,0.602694528023977,0,0.487932798790507,0,0,0,0.572471974262113,0.273748850145768,0.125542639594803,0.0764134057479513,0.0821005894499457,0,0,0.383829398097213,1.08371286321253,0,0,0.369754010166788,0,0,0,0.553995408531877,0.200544447470142,1.51907609501096,0,0.647787332037959,0,6.25212426752128,3.02300754951048,4.36651310138069,9.29716147622739,1.23350366406548,4.02618282163635,8.05538698502021,5.89169625016932,7.56743135643473,10.6871161028352,3.87290810150296,6.77132432971709,9.03563229804502,3.0019676506363,3.82029923556644,13.7737751566906,5.1348644332175,8.31138263538754,6.92687730392104,4.78712778291916,7.6720455095885,7.2552309657146,1.13477044938228,1.24564449799115,11.3061899365534,7.30076085788282,5.64690996233303,9.08099253950053,2.94622108790052,5.06339819905415,0,0,0.419317291016752,1.01095768031846,0.901061357049038,0,0,0,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58030450865046,0.196709770113833,1.57204305099666,0,0,0,0,0,0.222820913770347,0,0.221533894583621,0,0.128091319725675,0.130059347559878,1.64437904603676,1.10540007114339,0,0.296573126324121,0,0,0,0.383220493601921,0.34362744548263,0,0.318565414324097,0,0,0,0,0,0,0,0.80642697289893,0.534880391567015,0.289648807765598,2.43806866313962,0.670700859703636,0,4.3372698286148,0.50133791063589,1.01392563272577,0.795285947051099,0.486634870302636,0.472674085820339,0.221729397462564,0.351339142772504,0,0.364295288292542,0.370784442784429,0.324547393654683,0.696518949197069,0.531831842075461,0,0,0,0,0.860234595106124,0,0,0,0.275118041940067,0.208994966536811,0.775250277507987,1.06729878806013,1.00416183829401,0.402829317109147,0.760272105718513,0,0.735326160691737,0,0.625098097988558,0.22452937262617,0.225222960966644,0,0,0,0,0,0,1.98788780678127,0.379891534993739,2.1185468930115,2.58152958673932,0.354668382198357,0.560677600142307,0,0,0.311211035399766,0.269421344139376,0,0.302714855289863,0,0,0.312160076830321,0,0.896692083310806,0.352303495931295,0.161872944368132,0.280901613404497,0.204154171254893,0.122834317311768,0.309977343527296,0,0,0,0,0,0.375355559615893,1.10825646193673,0.438977620880838,0.30648779579902,0.300476117813194,0.453728732640084,1.79389635688862,0.427114777637135,0.423863802319124,1.80054657650641,0.412210116953756,1.54584324027377,1.11670113798954,2.36286865137773,0.194874010322397,1.00973509697646,1.19664868234989,0,2.13005755509969,0.705264687593482,0.169560592310488,1.73934767846967,1.90922284413584,0.860413786167011,0,0,0,0.207322110030741,0,0,0,0.643240938192885,0,0.464367928031979,0,0.473227200159376,0.168584690078102,0.241011029883482,0.220587945464788,0,0.474541238222193,0,0.392442930250692,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,1.09750285408626,0,0.502644862058154,0.740707561268237,0,0,0,0.463721619900307,0.117408694235822,0.577465791044295,0.462985512576611,0.570762456703795,0,0,0.492434012174795,0.702012795417713,0.297262324577456,0.93733833986777,0.335964256397719,0.567100388969546,0.626909658919938,0,0,0.985326475791887,0.968532774145487,4.14656231081544,11.5295962733569,2.5248486685276,0,0,0,0,0.102827492703324,0.600686115687835,0.285826432630578,0.112131084345361,0,0.7333828582095,0.387815147273333,0,2.535908257668,1.06375246633948,2.08014873822732,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0.904318131178758,0,0.799783929456456,1.2162378064119,0.502257091432126,6.32501818449095,0.718874566474748,1.14861935834114,1.42636905040718,1.30303176000821,1.02738161275192,0.537182889719687,0,0.788123040807709,1.2937654491571,0,0.254094624222463,0,0.773288812777695,0,0.637938751653163,0.749007023947182,0,0,0.36807447515742,0,0.271265023699736,1.03985430765404,2.67643483195743,0.630809660135739,1.63997980989798,0.601892199455438,0,0,0.664225598535437,0.184369168541703,1.12948698808508,0,0,0.413536052245775,1.50999940573032,0.320182673410333,0.606255142892519,1.66435439510497,0.30239029332968,0.248107807818777,1.07423381301644,0.280660094433074,1.66580894032411,1.53512174720011,0.804269605718038,0,0.616838775210622,0.355123450626254,0.98552587216571,1.55776328755086,1.04589340613963,0,0.200506470303285,1.74953878978203,0.229628896329213,0,0.393373244878272,0,0.15403067420883,0,0,0,0,0.510281115829547,0.647747748306418,0,0,0,0,0,0,0,0,0.769350375349168,0,0.650756789328606,0.721287081534056,0.366277859273374,0.247528499761764,0,0.650060246036521,3.21367859688319,0.096670718292122,0.154048617114644,0.15350367472613,0.137836572484531,0.322260734604821,0.145016693914229,0.255679882248303,0.0890320356467374,0.991709492165869,0.192190067365106,1.27612712494584,0.10115778085555,0.929691098594572,0.62962469366128,0.6970372701606,0.308033580176089,0,0.869932992075073,0,0.572499546967965,0,0.316379424718726,0.38126038784765,0.255897791311334,0,0,0,0.179872457583315,0,0.117812402345686,1.2130948894399,1.58510321173008,0.842516912477962,0,0.48742697926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|short_description=p@chr9:75785088..75785127,+ | |short_description=p@chr9:75785088..75785127,+ | ||
}} | }} |
Latest revision as of 02:42, 1 August 2015
Short description: | p@chr9:75785088..75785127, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:75785088..75785127, + |
Coexpression cluster: | C827_CD14_throat_tongue_chorionic_esophagus_endometrioid_Olfactory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.38e-33 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.38e-33 | 42 |
defensive cell | 2.37e-31 | 48 |
phagocyte | 2.37e-31 | 48 |
myeloid lineage restricted progenitor cell | 8.43e-24 | 66 |
granulocyte monocyte progenitor cell | 2.90e-23 | 67 |
monopoietic cell | 1.10e-22 | 59 |
monocyte | 1.10e-22 | 59 |
monoblast | 1.10e-22 | 59 |
promonocyte | 1.10e-22 | 59 |
myeloid leukocyte | 5.37e-22 | 72 |
macrophage dendritic cell progenitor | 1.40e-21 | 61 |
myeloid cell | 6.56e-15 | 108 |
common myeloid progenitor | 6.56e-15 | 108 |
hematopoietic lineage restricted progenitor cell | 2.23e-09 | 120 |
mesenchymal cell | 2.86e-09 | 354 |
connective tissue cell | 1.10e-08 | 361 |
nongranular leukocyte | 1.35e-08 | 115 |
leukocyte | 3.86e-08 | 136 |
motile cell | 8.03e-08 | 386 |
multi fate stem cell | 8.23e-08 | 427 |
somatic stem cell | 9.19e-08 | 433 |
amnion mesenchymal stem cell | 9.57e-08 | 5 |
stem cell | 1.28e-07 | 441 |
hematopoietic oligopotent progenitor cell | 3.46e-07 | 161 |
hematopoietic multipotent progenitor cell | 3.46e-07 | 161 |
hematopoietic stem cell | 6.50e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.49e-22 | 76 |
bone element | 2.43e-20 | 82 |
immune system | 2.64e-18 | 93 |
skeletal element | 2.07e-17 | 90 |
skeletal system | 3.63e-17 | 100 |
hematopoietic system | 4.44e-15 | 98 |
blood island | 4.44e-15 | 98 |
hemolymphoid system | 7.13e-15 | 108 |
musculoskeletal system | 2.44e-10 | 167 |
connective tissue | 8.53e-10 | 371 |
lateral plate mesoderm | 1.38e-07 | 203 |