FFCP PHASE1:Hg19::chr15:94443921..94443956,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000555255,ENST00000555364,uc002btf.1_5end | |association_with_transcript=0bp_to_ENST00000555255,ENST00000555364,uc002btf.1_5end | ||
|cluster_id=chr15:94443921..94443956,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_ENST00000555255_5end,CAGE_peak_1_at_ENST00000555364_5end,CAGE_peak_1_at_uc002btf.1_5end | |description=CAGE_peak_1_at_ENST00000555255_5end,CAGE_peak_1_at_ENST00000555364_5end,CAGE_peak_1_at_uc002btf.1_5end | ||
|id=chr15:94443921..94443956,+ | |id=chr15:94443921..94443956,+ | ||
|ontology_enrichment_celltype=CL:0000319!3.87e-09!1 | |ontology_enrichment_celltype=CL:0000319!3.87e-09!1 | ||
|ontology_enrichment_celltype_v019=CL:0000319;2.05e-29;1!CL:0000159;1.91e-15;2!CL:0000322;9.43e-11;3!CL:0002552;5.86e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,1.78e-29,1;CL:0000159,1.78e-15,2;CL:0000322,1.20e-10,3;CL:0002552,6.04e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.18e-12;10!UBERON:0005564;2.18e-12;10 | |||
|ontology_enrichment_disease=DOID:4960!3.58e-09!1;DOID:0070004!3.58e-09!1;DOID:3030!3.87e-09!1;DOID:0060085!6.16e-09!1;DOID:3165!6.16e-09!1;DOID:0060121!6.16e-09!1;DOID:2438!6.16e-09!1;DOID:4418!6.16e-09!1 | |ontology_enrichment_disease=DOID:4960!3.58e-09!1;DOID:0070004!3.58e-09!1;DOID:3030!3.87e-09!1;DOID:0060085!6.16e-09!1;DOID:3165!6.16e-09!1;DOID:0060121!6.16e-09!1;DOID:2438!6.16e-09!1;DOID:4418!6.16e-09!1 | ||
|ontology_enrichment_disease_v019=DOID:4960;2.05e-29;1!DOID:0070004;2.05e-29;1!DOID:3030;2.05e-29;1!DOID:3910;1.91e-15;2!DOID:3908;5.86e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,1.33e-29,1;DOID:0070004,1.33e-29,1;DOID:3030,1.78e-29,1;DOID:3910,2.74e-15,2;DOID:3908,6.77e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001282!9.02e-09!1;UBERON:0009842!9.02e-09!1;UBERON:0003704!9.02e-09!1;UBERON:0001171!9.02e-09!1;UBERON:0001172!9.02e-09!1 | |ontology_enrichment_uberon=UBERON:0001282!9.02e-09!1;UBERON:0009842!9.02e-09!1;UBERON:0003704!9.02e-09!1;UBERON:0001171!9.02e-09!1;UBERON:0001172!9.02e-09!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.91e-15;2!UBERON:0002173;1.91e-15;2!UBERON:0002186;1.91e-15;2!UBERON:0000473;3.17e-15;8!UBERON:0003135;2.36e-11;11!UBERON:0004821;9.43e-11;3!UBERON:0007499;9.43e-11;3!UBERON:0003215;9.43e-11;3!UBERON:0010368;9.43e-11;3!UBERON:0009911;9.43e-11;3!UBERON:0002299;9.43e-11;3!UBERON:0006524;9.43e-11;3!UBERON:0008874;9.43e-11;3!UBERON:0002169;9.43e-11;3!UBERON:0004894;9.43e-11;3!UBERON:0009856;2.18e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.65e-15,8;UBERON:0004903,2.74e-15,2;UBERON:0002173,2.74e-15,2;UBERON:0002186,2.74e-15,2;UBERON:0003135,2.07e-11,11;UBERON:0004821,1.20e-10,3;UBERON:0003215,1.20e-10,3;UBERON:0010368,1.20e-10,3;UBERON:0009911,1.20e-10,3;UBERON:0002299,1.20e-10,3;UBERON:0006524,1.20e-10,3;UBERON:0008874,1.20e-10,3;UBERON:0002169,1.20e-10,3;UBERON:0004894,1.20e-10,3 | |||
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|short_description=p1@ENST00000555255,p1@ENST00000555364,p1@uc002btf.1 | |short_description=p1@ENST00000555255,p1@ENST00000555364,p1@uc002btf.1 | ||
}} | }} |
Latest revision as of 05:49, 25 July 2015
Short description: | p1@ENST00000555255, p1@ENST00000555364, p1@uc002btf.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000555255_5end, CAGE_peak_1_at_ENST00000555364_5end, CAGE_peak_1_at_uc002btf.1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000555255, ENST00000555364, uc002btf.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 1.78e-29 | 1 |
seromucus secreting cell | 1.78e-15 | 2 |
pneumocyte | 1.20e-10 | 3 |
fibroblast of gingiva | 6.04e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
testis | 2.65e-15 | 8 |
bronchoalveolar duct junction | 2.74e-15 | 2 |
alveolar duct | 2.74e-15 | 2 |
bronchiole | 2.74e-15 | 2 |
male reproductive organ | 2.07e-11 | 11 |
pulmonary alveolus epithelium | 1.20e-10 | 3 |
alveolus | 1.20e-10 | 3 |
pulmonary lobule | 1.20e-10 | 3 |
lobule | 1.20e-10 | 3 |
alveolus of lung | 1.20e-10 | 3 |
alveolar system | 1.20e-10 | 3 |
pulmonary acinus | 1.20e-10 | 3 |
alveolar sac | 1.20e-10 | 3 |
alveolar wall | 1.20e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 1.33e-29 | 1 |
myeloma | 1.33e-29 | 1 |
mucinous adenocarcinoma | 1.78e-29 | 1 |
lung adenocarcinoma | 2.74e-15 | 2 |
non-small cell lung carcinoma | 6.77e-07 | 5 |