FFCP PHASE1:Hg19::chr9:6605284..6605310,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2731 | |EntrezGene=2731 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4313 | |HGNC=4313 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_ENST00000463305_5end | |association_with_transcript=-12bp_to_ENST00000463305_5end | ||
|cluster_id=chr9:6605284..6605310,- | |||
|coexpression_cluster_id=C69 | |||
|description=CAGE_peak_4_at_GLDC_5end | |description=CAGE_peak_4_at_GLDC_5end | ||
|id=chr9:6605284..6605310,- | |id=chr9:6605284..6605310,- | ||
|ontology_enrichment_celltype=CL:0000838!1.72e-15!52;CL:0000542!3.80e-15!53;CL:0000051!3.80e-15!53;CL:0000945!1.07e-13!24;CL:0000826!1.07e-13!24;CL:0000817!1.97e-08!3;CL:0001024!8.75e-07!1 | |ontology_enrichment_celltype=CL:0000838!1.72e-15!52;CL:0000542!3.80e-15!53;CL:0000051!3.80e-15!53;CL:0000945!1.07e-13!24;CL:0000826!1.07e-13!24;CL:0000817!1.97e-08!3;CL:0001024!8.75e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000817;1.56e-19;1!CL:0000945;2.44e-12;24!CL:0000542;3.75e-12;53!CL:0000084;6.21e-12;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.04e-21,52;CL:0000542,2.71e-21,53;CL:0000051,2.71e-21,53;CL:0000945,2.37e-12,24;CL:0000826,2.37e-12,24;CL:0000084,6.21e-12,25;CL:0000827,6.21e-12,25;CL:0000738,4.14e-10,136;CL:0002087,1.75e-09,115;CL:0002031,4.54e-09,120;CL:0000037,4.56e-08,168;CL:0000988,1.27e-07,177;CL:0000817,2.05e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;3.75e-12;53 | |||
|ontology_enrichment_disease=DOID:1909!2.40e-12!2;DOID:0060058!2.30e-09!10;DOID:2531!3.07e-09!51;DOID:0060083!3.07e-09!51;DOID:0060060!5.26e-07!1;DOID:0060061!5.26e-07!1;DOID:8691!5.26e-07!1;DOID:630!6.60e-07!1;DOID:0050177!6.60e-07!1;DOID:0050427!6.60e-07!1;DOID:2355!7.39e-07!1;DOID:9119!8.27e-07!1 | |ontology_enrichment_disease=DOID:1909!2.40e-12!2;DOID:0060058!2.30e-09!10;DOID:2531!3.07e-09!51;DOID:0060083!3.07e-09!51;DOID:0060060!5.26e-07!1;DOID:0060061!5.26e-07!1;DOID:8691!5.26e-07!1;DOID:630!6.60e-07!1;DOID:0050177!6.60e-07!1;DOID:0050427!6.60e-07!1;DOID:2355!7.39e-07!1;DOID:9119!8.27e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:0060060;4.69e-19;1!DOID:0060061;4.69e-19;1!DOID:8691;4.69e-19;1!DOID:0060058;5.26e-17;10!DOID:1909;3.27e-10;2!DOID:2531;7.00e-08;51!DOID:0060083;7.00e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,5.62e-19,1;DOID:0060061,5.62e-19,1;DOID:8691,5.62e-19,1;DOID:0060058,5.55e-17,10;DOID:2531,1.07e-12,51;DOID:0060083,1.07e-12,51;DOID:1909,3.27e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0002372!6.99e-07!1;UBERON:0001961!6.99e-07!1;UBERON:0001744!6.99e-07!1;UBERON:0001735!6.99e-07!1;UBERON:0001736!7.82e-07!1;UBERON:0006298!7.82e-07!1;UBERON:0002038!9.25e-07!1;UBERON:0009661!9.25e-07!1 | |ontology_enrichment_uberon=UBERON:0002372!6.99e-07!1;UBERON:0001961!6.99e-07!1;UBERON:0001744!6.99e-07!1;UBERON:0001735!6.99e-07!1;UBERON:0001736!7.82e-07!1;UBERON:0006298!7.82e-07!1;UBERON:0002038!9.25e-07!1;UBERON:0009661!9.25e-07!1 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p4@GLDC | |short_description=p4@GLDC | ||
}} | }} |
Latest revision as of 14:56, 17 September 2015
Short description: | p4@GLDC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GLDC_5end |
Coexpression cluster: | C69_anaplastic_CD14_cord_hairy_mycosis_adult_NK |
Association with transcript: | -12bp_to_ENST00000463305_5end |
EntrezGene: | GLDC |
HGNC: | 4313 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.04e-21 | 52 |
lymphocyte | 2.71e-21 | 53 |
common lymphoid progenitor | 2.71e-21 | 53 |
lymphocyte of B lineage | 2.37e-12 | 24 |
pro-B cell | 2.37e-12 | 24 |
T cell | 6.21e-12 | 25 |
pro-T cell | 6.21e-12 | 25 |
leukocyte | 4.14e-10 | 136 |
nongranular leukocyte | 1.75e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 4.54e-09 | 120 |
hematopoietic stem cell | 4.56e-08 | 168 |
hematopoietic cell | 1.27e-07 | 177 |
precursor B cell | 2.05e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 5.62e-19 | 1 |
cutaneous T cell lymphoma | 5.62e-19 | 1 |
mycosis fungoides | 5.62e-19 | 1 |
lymphoma | 5.55e-17 | 10 |
hematologic cancer | 1.07e-12 | 51 |
immune system cancer | 1.07e-12 | 51 |
melanoma | 3.27e-10 | 2 |