FFCP PHASE1:Hg19::chr9:35489936..35489947,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9853 | |EntrezGene=9853 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23625 | |HGNC=23625 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N2Y8 | |UniProt=Q8N2Y8 | ||
|association_with_transcript=-59bp_to_NM_014806,uc003zww.2,uc010mkq.2_5end | |association_with_transcript=-59bp_to_NM_014806,uc003zww.2,uc010mkq.2_5end | ||
|cluster_id=chr9:35489936..35489947,+ | |||
|description=CAGE_peak_19_at_RUSC2_5end | |description=CAGE_peak_19_at_RUSC2_5end | ||
|id=chr9:35489936..35489947,+ | |id=chr9:35489936..35489947,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.36e-07!42;CL:0000860!3.40e-07!45 | |ontology_enrichment_celltype=CL:0002057!2.36e-07!42;CL:0000860!3.40e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.07e-14;33!CL:0002057;4.07e-14;33!CL:0000473;1.58e-09;39!CL:0000234;1.58e-09;39!CL:0000576;9.28e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.23e-11,42;CL:0002057,1.23e-11,42;CL:0000473,4.71e-10,48;CL:0000234,4.71e-10,48;CL:0002194,7.80e-08,59;CL:0000576,7.80e-08,59;CL:0000040,7.80e-08,59;CL:0000559,7.80e-08,59;CL:0002009,1.51e-07,61;CL:0000839,6.60e-07,66;CL:0000557,8.63e-07,67 | |||
|ontology_enrichment_development_v019=CL:0002057;9.53e-10;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!4.38e-11!34;UBERON:0002619!1.25e-10!22;UBERON:0002791!2.03e-10!33;UBERON:0001869!2.90e-10!32;UBERON:0002020!1.07e-09!34;UBERON:0003528!1.07e-09!34;UBERON:0001049!1.61e-09!57;UBERON:0005068!1.61e-09!57;UBERON:0006241!1.61e-09!57;UBERON:0007135!1.61e-09!57;UBERON:0001950!1.69e-09!20;UBERON:0000955!2.25e-09!69;UBERON:0006238!2.25e-09!69;UBERON:0000956!3.21e-09!25;UBERON:0000203!3.21e-09!25;UBERON:0002780!3.30e-09!41;UBERON:0001890!3.30e-09!41;UBERON:0006240!3.30e-09!41;UBERON:0000073!4.06e-09!94;UBERON:0001016!4.06e-09!94;UBERON:0001017!7.90e-09!82;UBERON:0005743!8.63e-09!86;UBERON:0003080!9.59e-09!42;UBERON:0007023!1.20e-08!115;UBERON:0000062!1.59e-08!511;UBERON:0002616!3.89e-08!59;UBERON:0003075!5.91e-07!86;UBERON:0007284!5.91e-07!86;UBERON:0000467!6.20e-07!625;UBERON:0000480!7.96e-07!626 | |ontology_enrichment_uberon=UBERON:0001893!4.38e-11!34;UBERON:0002619!1.25e-10!22;UBERON:0002791!2.03e-10!33;UBERON:0001869!2.90e-10!32;UBERON:0002020!1.07e-09!34;UBERON:0003528!1.07e-09!34;UBERON:0001049!1.61e-09!57;UBERON:0005068!1.61e-09!57;UBERON:0006241!1.61e-09!57;UBERON:0007135!1.61e-09!57;UBERON:0001950!1.69e-09!20;UBERON:0000955!2.25e-09!69;UBERON:0006238!2.25e-09!69;UBERON:0000956!3.21e-09!25;UBERON:0000203!3.21e-09!25;UBERON:0002780!3.30e-09!41;UBERON:0001890!3.30e-09!41;UBERON:0006240!3.30e-09!41;UBERON:0000073!4.06e-09!94;UBERON:0001016!4.06e-09!94;UBERON:0001017!7.90e-09!82;UBERON:0005743!8.63e-09!86;UBERON:0003080!9.59e-09!42;UBERON:0007023!1.20e-08!115;UBERON:0000062!1.59e-08!511;UBERON:0002616!3.89e-08!59;UBERON:0003075!5.91e-07!86;UBERON:0007284!5.91e-07!86;UBERON:0000467!6.20e-07!625;UBERON:0000480!7.96e-07!626 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;6.26e-17;22!UBERON:0000956;6.81e-15;25!UBERON:0000203;6.81e-15;25!UBERON:0001950;8.56e-14;20!UBERON:0001869;7.06e-12;32!UBERON:0002791;2.83e-11;32!UBERON:0001893;2.75e-10;34!UBERON:0003528;9.71e-10;34!UBERON:0002020;9.71e-10;34!UBERON:0002581;1.15e-09;1!UBERON:0002780;1.77e-08;41!UBERON:0001890;1.77e-08;41!UBERON:0002021;1.40e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,5.71e-17,22;UBERON:0000956,6.28e-15,25;UBERON:0000203,6.28e-15,25;UBERON:0001950,9.21e-14,20;UBERON:0002791,1.32e-11,32;UBERON:0001869,1.32e-11,32;UBERON:0003528,6.73e-11,34;UBERON:0002020,6.73e-11,34;UBERON:0001893,6.73e-11,34;UBERON:0002581,2.08e-09,1;UBERON:0002780,5.91e-09,41;UBERON:0001890,5.91e-09,41;UBERON:0003080,5.91e-09,41;UBERON:0006240,5.91e-09,41;UBERON:0002021,1.04e-07,5;UBERON:0001017,7.76e-07,81;UBERON:0000073,8.57e-07,53;UBERON:0002616,8.57e-07,53 | |||
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| ||
|short_description=p19@RUSC2 | |short_description=p19@RUSC2 | ||
}} | }} |
Latest revision as of 07:25, 17 September 2015
Short description: | p19@RUSC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_RUSC2_5end |
Coexpression cluster: | NA |
Association with transcript: | -59bp_to_NM_014806, uc003zww.2, uc010mkq.2_5end |
EntrezGene: | RUSC2 |
HGNC: | 23625 |
UniProt: | Q8N2Y8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.23e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.23e-11 | 42 |
defensive cell | 4.71e-10 | 48 |
phagocyte | 4.71e-10 | 48 |
monopoietic cell | 7.80e-08 | 59 |
monocyte | 7.80e-08 | 59 |
monoblast | 7.80e-08 | 59 |
promonocyte | 7.80e-08 | 59 |
macrophage dendritic cell progenitor | 1.51e-07 | 61 |
myeloid lineage restricted progenitor cell | 6.60e-07 | 66 |
granulocyte monocyte progenitor cell | 8.63e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 5.71e-17 | 22 |
cerebral cortex | 6.28e-15 | 25 |
pallium | 6.28e-15 | 25 |
neocortex | 9.21e-14 | 20 |
regional part of telencephalon | 1.32e-11 | 32 |
cerebral hemisphere | 1.32e-11 | 32 |
brain grey matter | 6.73e-11 | 34 |
gray matter | 6.73e-11 | 34 |
telencephalon | 6.73e-11 | 34 |
postcentral gyrus | 2.08e-09 | 1 |
regional part of forebrain | 5.91e-09 | 41 |
forebrain | 5.91e-09 | 41 |
anterior neural tube | 5.91e-09 | 41 |
future forebrain | 5.91e-09 | 41 |
occipital lobe | 1.04e-07 | 5 |
central nervous system | 7.76e-07 | 81 |
regional part of nervous system | 8.57e-07 | 53 |
regional part of brain | 8.57e-07 | 53 |