FFCP PHASE1:Hg19::chr15:57210818..57210930,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6938 | |EntrezGene=6938 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11623 | |HGNC=11623 | ||
|TSSclassifier=strong | |||
|UniProt=Q99081,E9PGY0 | |UniProt=Q99081,E9PGY0 | ||
|association_with_transcript=0bp_to_ENST00000267811,ENST00000333725,ENST00000438423,ENST00000452095,ENST00000558908,ENST00000559609,ENST00000560190,NM_003205,NM_207036,NM_207037,NM_207038,uc002aea.2,uc002aeb.2,uc002aec.2,uc002aed.2,uc010bfs.2,uc010ugn.1_5end | |association_with_transcript=0bp_to_ENST00000267811,ENST00000333725,ENST00000438423,ENST00000452095,ENST00000558908,ENST00000559609,ENST00000560190,NM_003205,NM_207036,NM_207037,NM_207038,uc002aea.2,uc002aeb.2,uc002aec.2,uc002aed.2,uc010bfs.2,uc010ugn.1_5end | ||
|cluster_id=chr15:57210818..57210930,+ | |||
|description=CAGE_peak_1_at_TCF12_5end | |description=CAGE_peak_1_at_TCF12_5end | ||
|id=chr15:57210818..57210930,+ | |id=chr15:57210818..57210930,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.46e-26!115;UBERON:0001049!6.15e-15!57;UBERON:0005068!6.15e-15!57;UBERON:0006241!6.15e-15!57;UBERON:0007135!6.15e-15!57;UBERON:0000073!1.23e-14!94;UBERON:0001016!1.23e-14!94;UBERON:0001017!2.40e-14!82;UBERON:0005743!1.17e-13!86;UBERON:0000955!5.80e-13!69;UBERON:0006238!5.80e-13!69;UBERON:0002616!8.13e-13!59;UBERON:0002346!1.13e-12!90;UBERON:0003080!1.28e-12!42;UBERON:0003075!1.84e-12!86;UBERON:0007284!1.84e-12!86;UBERON:0000153!2.36e-12!129;UBERON:0007811!2.36e-12!129;UBERON:0002780!3.11e-12!41;UBERON:0001890!3.11e-12!41;UBERON:0006240!3.11e-12!41;UBERON:0000924!6.75e-12!173;UBERON:0006601!6.75e-12!173;UBERON:0004121!1.33e-11!169;UBERON:0000033!3.81e-11!123;UBERON:0002020!1.29e-09!34;UBERON:0003528!1.29e-09!34;UBERON:0001893!2.38e-09!34;UBERON:0002791!2.98e-09!33;UBERON:0000062!1.53e-08!511;UBERON:0003056!1.58e-08!61;UBERON:0001869!2.80e-08!32 | |ontology_enrichment_uberon=UBERON:0007023!1.46e-26!115;UBERON:0001049!6.15e-15!57;UBERON:0005068!6.15e-15!57;UBERON:0006241!6.15e-15!57;UBERON:0007135!6.15e-15!57;UBERON:0000073!1.23e-14!94;UBERON:0001016!1.23e-14!94;UBERON:0001017!2.40e-14!82;UBERON:0005743!1.17e-13!86;UBERON:0000955!5.80e-13!69;UBERON:0006238!5.80e-13!69;UBERON:0002616!8.13e-13!59;UBERON:0002346!1.13e-12!90;UBERON:0003080!1.28e-12!42;UBERON:0003075!1.84e-12!86;UBERON:0007284!1.84e-12!86;UBERON:0000153!2.36e-12!129;UBERON:0007811!2.36e-12!129;UBERON:0002780!3.11e-12!41;UBERON:0001890!3.11e-12!41;UBERON:0006240!3.11e-12!41;UBERON:0000924!6.75e-12!173;UBERON:0006601!6.75e-12!173;UBERON:0004121!1.33e-11!169;UBERON:0000033!3.81e-11!123;UBERON:0002020!1.29e-09!34;UBERON:0003528!1.29e-09!34;UBERON:0001893!2.38e-09!34;UBERON:0002791!2.98e-09!33;UBERON:0000062!1.53e-08!511;UBERON:0003056!1.58e-08!61;UBERON:0001869!2.80e-08!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.24e-09;41!UBERON:0001890;1.24e-09;41!UBERON:0000073;1.40e-08;53!UBERON:0002616;1.40e-08;53!UBERON:0007023;1.63e-08;114!UBERON:0003528;5.35e-08;34!UBERON:0002020;5.35e-08;34!UBERON:0002791;7.20e-08;32!UBERON:0001893;8.74e-08;34!UBERON:0001869;1.83e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.26e-26,114;UBERON:0001016,6.05e-15,89;UBERON:0001049,1.50e-14,56;UBERON:0005068,1.50e-14,56;UBERON:0006241,1.50e-14,56;UBERON:0007135,1.50e-14,56;UBERON:0001017,5.48e-14,81;UBERON:0000073,2.56e-13,53;UBERON:0002616,2.56e-13,53;UBERON:0011216,8.38e-13,223;UBERON:0000955,1.32e-12,68;UBERON:0006238,1.32e-12,68;UBERON:0002780,3.11e-12,41;UBERON:0001890,3.11e-12,41;UBERON:0003080,3.11e-12,41;UBERON:0006240,3.11e-12,41;UBERON:0002346,1.19e-11,86;UBERON:0003075,1.94e-11,82;UBERON:0007284,1.94e-11,82;UBERON:0004121,6.92e-11,171;UBERON:0000924,6.92e-11,171;UBERON:0006601,6.92e-11,171;UBERON:0003528,1.29e-09,34;UBERON:0002020,1.29e-09,34;UBERON:0001893,2.38e-09,34;UBERON:0002791,1.00e-08,32;UBERON:0003056,1.17e-08,61;UBERON:0001869,2.80e-08,32;UBERON:0010371,8.14e-08,104;UBERON:0010314,3.72e-07,132 | |||
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| ||
|short_description=p1@TCF12 | |short_description=p1@TCF12 | ||
}} | }} |
Latest revision as of 05:52, 18 September 2015
Short description: | p1@TCF12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TCF12_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000267811, ENST00000333725, ENST00000438423, ENST00000452095, ENST00000558908, ENST00000559609, ENST00000560190, NM_003205, NM_207036, NM_207037, NM_207038, uc002aea.2, uc002aeb.2, uc002aec.2, uc002aed.2, uc010bfs.2, uc010ugn.1_5end |
EntrezGene: | TCF12 |
HGNC: | 11623 |
UniProt: | Q99081E9PGY0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 5.26e-26 | 114 |
nervous system | 6.05e-15 | 89 |
neural tube | 1.50e-14 | 56 |
neural rod | 1.50e-14 | 56 |
future spinal cord | 1.50e-14 | 56 |
neural keel | 1.50e-14 | 56 |
central nervous system | 5.48e-14 | 81 |
regional part of nervous system | 2.56e-13 | 53 |
regional part of brain | 2.56e-13 | 53 |
organ system subdivision | 8.38e-13 | 223 |
brain | 1.32e-12 | 68 |
future brain | 1.32e-12 | 68 |
regional part of forebrain | 3.11e-12 | 41 |
forebrain | 3.11e-12 | 41 |
anterior neural tube | 3.11e-12 | 41 |
future forebrain | 3.11e-12 | 41 |
neurectoderm | 1.19e-11 | 86 |
neural plate | 1.94e-11 | 82 |
presumptive neural plate | 1.94e-11 | 82 |
ectoderm-derived structure | 6.92e-11 | 171 |
ectoderm | 6.92e-11 | 171 |
presumptive ectoderm | 6.92e-11 | 171 |
brain grey matter | 1.29e-09 | 34 |
gray matter | 1.29e-09 | 34 |
telencephalon | 2.38e-09 | 34 |
regional part of telencephalon | 1.00e-08 | 32 |
pre-chordal neural plate | 1.17e-08 | 61 |
cerebral hemisphere | 2.80e-08 | 32 |
ecto-epithelium | 8.14e-08 | 104 |
structure with developmental contribution from neural crest | 3.72e-07 | 132 |