FFCP PHASE1:Hg19::chr9:21591753..21591793,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:21591753..21591793,- | |||
|coexpression_cluster_id=C4813 | |||
|description=CAGE_peak_at_chr9:21591753..21591793,- | |description=CAGE_peak_at_chr9:21591753..21591793,- | ||
|id=chr9:21591753..21591793,- | |id=chr9:21591753..21591793,- | ||
|ontology_enrichment_celltype=CL:0000548!2.78e-17!679;CL:0000004!2.78e-17!679;CL:0000255!2.78e-17!679;CL:0000012!8.16e-17!682;CL:0000220!6.59e-14!246;CL:0002321!1.67e-13!248;CL:0000055!1.30e-12!180;CL:0000066!1.40e-12!254;CL:0000003!9.53e-12!722;CL:0002371!2.01e-10!591;CL:0000680!7.19e-10!57;CL:0000056!7.19e-10!57;CL:0000355!7.19e-10!57;CL:0000144!2.36e-09!625;CL:0000359!6.19e-09!32;CL:0002076!7.58e-09!43;CL:0000187!9.27e-09!54;CL:0002368!1.30e-08!13;CL:0000183!5.31e-08!59;CL:0000192!2.26e-07!42;CL:0000514!2.26e-07!42;CL:0000393!3.27e-07!60;CL:0000211!3.27e-07!60;CL:0000063!3.38e-07!578;CL:0002620!8.22e-07!23 | |ontology_enrichment_celltype=CL:0000548!2.78e-17!679;CL:0000004!2.78e-17!679;CL:0000255!2.78e-17!679;CL:0000012!8.16e-17!682;CL:0000220!6.59e-14!246;CL:0002321!1.67e-13!248;CL:0000055!1.30e-12!180;CL:0000066!1.40e-12!254;CL:0000003!9.53e-12!722;CL:0002371!2.01e-10!591;CL:0000680!7.19e-10!57;CL:0000056!7.19e-10!57;CL:0000355!7.19e-10!57;CL:0000144!2.36e-09!625;CL:0000359!6.19e-09!32;CL:0002076!7.58e-09!43;CL:0000187!9.27e-09!54;CL:0002368!1.30e-08!13;CL:0000183!5.31e-08!59;CL:0000192!2.26e-07!42;CL:0000514!2.26e-07!42;CL:0000393!3.27e-07!60;CL:0000211!3.27e-07!60;CL:0000063!3.38e-07!578;CL:0002620!8.22e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002368;3.44e-09;13!CL:0002076;1.72e-08;42!CL:0000244;1.01e-07;4!CL:0000731;1.01e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,7.39e-11,42;CL:0002368,2.90e-09,13;CL:0000066,3.85e-08,253;CL:0000244,9.06e-08,4;CL:0000731,9.06e-08,4;CL:0002321,2.28e-07,250;CL:0000223,3.56e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:193!1.07e-08!29;DOID:120!2.97e-08!27;DOID:2394!1.03e-07!14 | |ontology_enrichment_disease=DOID:193!1.07e-08!29;DOID:120!2.97e-08!27;DOID:2394!1.03e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:120;1.05e-09;27!DOID:193;9.66e-09;29!DOID:2394;1.77e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:120,1.30e-09,27;DOID:193,1.17e-08,29;DOID:2394,3.24e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000486!9.71e-13!82;UBERON:0001637!4.12e-11!42;UBERON:0003509!4.12e-11!42;UBERON:0004572!4.12e-11!42;UBERON:0004573!6.58e-10!33;UBERON:0004571!6.58e-10!33;UBERON:0000914!1.47e-09!83;UBERON:0002329!1.47e-09!83;UBERON:0003077!1.47e-09!83;UBERON:0003059!1.47e-09!83;UBERON:0007282!1.47e-09!83;UBERON:0009618!1.47e-09!83;UBERON:0007285!1.47e-09!83;UBERON:0001981!2.68e-09!60;UBERON:0007500!2.68e-09!60;UBERON:0004537!2.68e-09!60;UBERON:0006965!2.68e-09!60;UBERON:0004290!3.12e-09!70;UBERON:0002049!3.83e-09!79;UBERON:0007798!3.83e-09!79;UBERON:0000055!9.99e-09!69;UBERON:0001134!2.06e-08!61;UBERON:0002036!2.06e-08!61;UBERON:0003082!2.06e-08!61;UBERON:0000467!2.10e-08!625;UBERON:0000490!2.33e-08!138;UBERON:0000480!2.73e-08!626;UBERON:0000483!7.61e-08!309;UBERON:0002385!9.06e-08!63;UBERON:0001015!9.06e-08!63;UBERON:0000383!9.06e-08!63;UBERON:0000947!9.82e-08!21;UBERON:0010191!9.82e-08!21;UBERON:0004872!1.10e-07!84;UBERON:0000119!1.81e-07!312;UBERON:0000468!7.27e-07!659;UBERON:0004535!8.83e-07!110 | |ontology_enrichment_uberon=UBERON:0000486!9.71e-13!82;UBERON:0001637!4.12e-11!42;UBERON:0003509!4.12e-11!42;UBERON:0004572!4.12e-11!42;UBERON:0004573!6.58e-10!33;UBERON:0004571!6.58e-10!33;UBERON:0000914!1.47e-09!83;UBERON:0002329!1.47e-09!83;UBERON:0003077!1.47e-09!83;UBERON:0003059!1.47e-09!83;UBERON:0007282!1.47e-09!83;UBERON:0009618!1.47e-09!83;UBERON:0007285!1.47e-09!83;UBERON:0001981!2.68e-09!60;UBERON:0007500!2.68e-09!60;UBERON:0004537!2.68e-09!60;UBERON:0006965!2.68e-09!60;UBERON:0004290!3.12e-09!70;UBERON:0002049!3.83e-09!79;UBERON:0007798!3.83e-09!79;UBERON:0000055!9.99e-09!69;UBERON:0001134!2.06e-08!61;UBERON:0002036!2.06e-08!61;UBERON:0003082!2.06e-08!61;UBERON:0000467!2.10e-08!625;UBERON:0000490!2.33e-08!138;UBERON:0000480!2.73e-08!626;UBERON:0000483!7.61e-08!309;UBERON:0002385!9.06e-08!63;UBERON:0001015!9.06e-08!63;UBERON:0000383!9.06e-08!63;UBERON:0000947!9.82e-08!21;UBERON:0010191!9.82e-08!21;UBERON:0004872!1.10e-07!84;UBERON:0000119!1.81e-07!312;UBERON:0000468!7.27e-07!659;UBERON:0004535!8.83e-07!110 | ||
|ontology_enrichment_uberon_v019=UBERON:0000365;3.43e-09;5!UBERON:0003134;3.70e-08;33!UBERON:0005910;1.61e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,3.16e-09,5;UBERON:0003100,8.22e-08,41;UBERON:0005910,1.50e-07,6;UBERON:0003134,3.26e-07,37;UBERON:0000474,3.26e-07,37;UBERON:0001637,4.61e-07,42;UBERON:0003509,4.61e-07,42;UBERON:0004572,4.61e-07,42 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0.37129905888014,0,2.01697543935533,0.602694528023977,1.46062018077475,0.975865597581014,0.492484232307152,1.02000345622126,0.313454721478088,0,1.36874425072884,0,0,0,0,0,0,0,3.67768489791571,4.2168828628955,18.1179464981726,0,0,0,1.10799081706375,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0,0,0,0.580418477257168,2.26954089876456,0.622822248995575,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3858578411533,0.973269740605272,1.79616152611729,1.77383517970051,1.05401742831751,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0.596287222100115,0.860234595106124,4.16568601929113,0.56530794192401,0,0,0.417989933073621,1.03366703667732,0.35576626268671,0.66944122552934,0.402829317109147,0,0,0.367663080345869,0,0.446498641420399,0.22452937262617,0.112611480483322,1.53316637465883,0,0.916008719652036,0,0,1.3082821564276,0.993943903390637,1.13967460498122,3.44263870114369,11.4734648299525,1.77334191099179,2.24271040056923,1.06748995729705,0.24666754841716,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0.312160076830321,0.570471821544449,0.298897361103602,4.11020745253177,0.971237666208789,1.26405726032024,0.204154171254893,0,0,0,0,0,0.718618141816238,1.17835279767846,1.00094815897571,0,0.438977620880838,0,0,0,1.25572744982203,0.213557388818567,0,2.70081986475962,0.618315175430633,0.515281080091258,0.18611685633159,6.41350062516812,1.36411807225678,2.01947019395292,0.184099797284599,0,1.42003837006646,0.705264687593482,0.508681776931463,0.193260853163297,1.63647672354501,1.14721838155602,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0,0.330881918197182,0.217879444092406,0.474541238222193,0.404493924480493,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0.768251997860379,4.49607013030478,2.81481122752566,3.51836091602412,0,0,0,0.927443239800615,0.469634776943287,0,0,0,0,0,0,0,0,0.93733833986777,3.19166043577833,0.708875486211932,1.34337784054272,1.45316969256981,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,1.29271715757778,0,0,0,1.04007436911366,0.257207374262142,1.41849132023278,0,0,0,1.64648067356154,0,0.355391948742546,0,1.80863626235752,1.74306691720059,1.89948683245908,0,0,0,0.239624855491583,0,2.85273810081437,1.59259437334337,1.84928690295345,0.358121926479791,0,0,0,0,0.254094624222463,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0.415941723061614,0,0.157702415033935,0.234282829985426,0.601892199455438,0,0,1.32845119707087,0.921845842708516,0.521301686808497,0,0,0,0,0.106727557803444,0,0,0,0.496215615637554,0.306923946576125,0.280660094433074,0.384417447767103,0,0.321707842287215,0,0.308419387605311,1.06537035187876,0.410635780069046,2.07701771673448,0.697262270759755,0,6.01519410909855,13.7200673514486,0.574072240823034,0,0,0,0.385076685522074,0,0,1.05551628892876,0,0.170093705276516,0,0,0.270946437543853,0,0,0.831076008928724,0,0,0,1.28225062558195,0,0.325378394664303,0,0.824125183365091,1.32015199872941,2.87132768998086,1.30012049207304,0,1.64340221096607,0.154048617114644,0.614014698904518,0.551346289938122,0.751941714077915,0.725083469571143,0.340906509664404,0.0890320356467374,5.2891172915513,1.72971060628596,13.9097856619097,0.809262246844399,0,1.5740617341532,0.6970372701606,0.924100740528266,1.06461206063404,0.869932992075073,2.22389062924704,5.58187058293766,0,0.316379424718726,0,0,0,0,0.78494864019923,0.359744915166629,0.274537029736055,0.471249609382746,0.404364963146632,0,0,0,0.487426979262569,1.05650146756755,0,0,3.39024349860728,0.551365343546124,2.65375590096488,1.75380354101505,0,0,2.02910376962704,1.239293992399,1.97186921772569,0.573645408816206,0.0982490410131212,1.07001315444375,3.19284957663538,0.422215270595328,0,0,0,7.50532479258994,5.3624182042863,6.53345909167936,0,4.73555909938353,6.73885902670502,7.98174276366016,19.5264890175916,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,0,0,1.00177834520615,0,0,0,0,0,0,0.123084805461069,0,3.50486569474575,0,0,0,0,0,0,0,0,0,0,0,3.98277068999249,0.508507300585533,0.472775363535873,0,0,0,0,0,0,0,0,0,1.19832309870889,4.46155981691531,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,2.74297483886435,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0.569219092059585,5.54698692052555,0,2.15583274311631,0.0870592065804026,0,1.37588825977293,1.16107597546902,0.803982487948041,0.903270027585302,0,0,0,2.46675464364152,3.37814839895082,0,0.586654148204409,1.52301758477914,0,0,0,0.916292769327325,0,0,0,1.64985824231757,0,0,1.01998217636322,2.88950589901519,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0.0607495566580247,0.670869375198532,0,0,6.75842153724202,1.97216073266129,0,0,0,0,3.80099721227599,0.864221491201268,4.24563568142232,7.18381149374925,0,5.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| ||
|short_description=p@chr9:21591753..21591793,- | |short_description=p@chr9:21591753..21591793,- | ||
}} | }} |
Latest revision as of 01:08, 1 August 2015
Short description: | p@chr9:21591753..21591793, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:21591753..21591793, - |
Coexpression cluster: | C4813_Urothelial_Bronchial_Small_Prostate_Fibroblast_tubular_lens |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 7.39e-11 | 42 |
respiratory epithelial cell | 2.90e-09 | 13 |
epithelial cell | 3.85e-08 | 253 |
transitional epithelial cell | 9.06e-08 | 4 |
urothelial cell | 9.06e-08 | 4 |
embryonic cell | 2.28e-07 | 250 |
endodermal cell | 3.56e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
urothelium | 3.16e-09 | 5 |
female organism | 8.22e-08 | 41 |
transitional epithelium | 1.50e-07 | 6 |
female reproductive organ | 3.26e-07 | 37 |
female reproductive system | 3.26e-07 | 37 |
artery | 4.61e-07 | 42 |
arterial blood vessel | 4.61e-07 | 42 |
arterial system | 4.61e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
female reproductive organ cancer | 1.30e-09 | 27 |
reproductive organ cancer | 1.17e-08 | 29 |
ovarian cancer | 3.24e-08 | 14 |