FFCP PHASE1:Hg19::chr9:2017714..2017737,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:2017714..2017737,+ | |||
|coexpression_cluster_id=C3568 | |||
|description=CAGE_peak_at_chr9:2017714..2017737,+ | |description=CAGE_peak_at_chr9:2017714..2017737,+ | ||
|id=chr9:2017714..2017737,+ | |id=chr9:2017714..2017737,+ | ||
|ontology_enrichment_celltype=CL:0000037!6.19e-22!172;CL:0000566!6.19e-22!172;CL:0000988!9.29e-20!182;CL:0000738!9.35e-20!140;CL:0002032!9.92e-20!165;CL:0000837!9.92e-20!165;CL:0002031!2.32e-14!124;CL:0002087!2.84e-13!119;CL:0000763!5.63e-13!112;CL:0000049!5.63e-13!112;CL:0000766!2.08e-11!76;CL:0000791!1.89e-10!18;CL:0000789!1.89e-10!18;CL:0002420!1.89e-10!18;CL:0002419!1.89e-10!18;CL:0000790!1.89e-10!18;CL:0000557!7.28e-09!71;CL:0000084!1.22e-07!25;CL:0000827!1.22e-07!25;CL:0000839!1.28e-07!70;CL:0000838!4.95e-07!52;CL:0000542!6.92e-07!53;CL:0000051!6.92e-07!53 | |ontology_enrichment_celltype=CL:0000037!6.19e-22!172;CL:0000566!6.19e-22!172;CL:0000988!9.29e-20!182;CL:0000738!9.35e-20!140;CL:0002032!9.92e-20!165;CL:0000837!9.92e-20!165;CL:0002031!2.32e-14!124;CL:0002087!2.84e-13!119;CL:0000763!5.63e-13!112;CL:0000049!5.63e-13!112;CL:0000766!2.08e-11!76;CL:0000791!1.89e-10!18;CL:0000789!1.89e-10!18;CL:0002420!1.89e-10!18;CL:0002419!1.89e-10!18;CL:0000790!1.89e-10!18;CL:0000557!7.28e-09!71;CL:0000084!1.22e-07!25;CL:0000827!1.22e-07!25;CL:0000839!1.28e-07!70;CL:0000838!4.95e-07!52;CL:0000542!6.92e-07!53;CL:0000051!6.92e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.73e-15;18!CL:0000789;1.73e-15;18!CL:0002419;1.73e-15;18!CL:0000084;3.35e-12;25!CL:0000625;5.02e-10;11!CL:0000094;2.53e-09;8!CL:0000624;1.69e-08;6!CL:0000097;4.41e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.47e-21,168;CL:0000738,1.88e-19,136;CL:0000988,3.73e-19,177;CL:0002032,2.93e-18,161;CL:0000837,2.93e-18,161;CL:0000791,9.00e-16,18;CL:0000789,9.00e-16,18;CL:0002420,9.00e-16,18;CL:0002419,9.00e-16,18;CL:0000790,9.00e-16,18;CL:0002031,1.37e-12,120;CL:0000084,1.67e-12,25;CL:0000827,1.67e-12,25;CL:0002087,5.91e-11,115;CL:0000625,2.86e-10,11;CL:0000763,6.48e-10,108;CL:0000049,6.48e-10,108;CL:0000094,2.61e-09,8;CL:0000838,3.27e-09,52;CL:0000542,7.01e-09,53;CL:0000051,7.01e-09,53;CL:0000766,1.40e-08,72;CL:0000624,1.53e-08,6;CL:0000097,4.78e-07,5;CL:0002028,4.78e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000790;1.73e-15;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.13e-19!115;UBERON:0002193!3.45e-14!112;UBERON:0002390!5.44e-14!102;UBERON:0003061!5.44e-14!102;UBERON:0002371!2.06e-07!80;UBERON:0000178!5.18e-07!15;UBERON:0000179!5.18e-07!15;UBERON:0000463!5.18e-07!15;UBERON:0002405!6.64e-07!115;UBERON:0001474!7.22e-07!86 | |ontology_enrichment_uberon=UBERON:0007023!6.13e-19!115;UBERON:0002193!3.45e-14!112;UBERON:0002390!5.44e-14!102;UBERON:0003061!5.44e-14!102;UBERON:0002371!2.06e-07!80;UBERON:0000178!5.18e-07!15;UBERON:0000179!5.18e-07!15;UBERON:0000463!5.18e-07!15;UBERON:0002405!6.64e-07!115;UBERON:0001474!7.22e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.94e-09;15!UBERON:0000179;3.94e-09;15!UBERON:0000463;3.94e-09;15!UBERON:0002390;2.64e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.76e-16,114;UBERON:0002193,3.63e-12,108;UBERON:0002390,5.65e-12,98;UBERON:0003061,5.65e-12,98;UBERON:0000178,4.00e-09,15;UBERON:0000179,4.00e-09,15;UBERON:0000463,4.00e-09,15;UBERON:0002405,4.97e-07,93 | |||
|phase1_expression=0.181678379270557,0.856402095563933,1.40954404095971,1.0007329835313,0,1.74467704820074,0,0,0.261185628199839,0,0,0.655324116390517,0.791300934685361,0.123766352960047,0,0.672325146451775,0,0,0,0.246242116153576,0.408001382488506,0,0,0,0,0.458480434487708,0.328402357799783,0.314843125254717,2.36018566109342,6.1412703695554,3.71558695958582,0,0,0,0,0,2.05520307534393,1.66198622559563,2.4065333696417,1.51907609501096,1.79132379391939,1.94336199611388,0.77272670290256,0.436194716338694,0.377875943688809,0.485168122375632,0.464858073811369,0.411167888021826,0.619412741790207,0.863077176966451,0.256160706529101,0.47296445977717,0.344745680736619,1.29096936716765,0,1.12945403725563,0.818718450173537,0,0.918251677112708,0,1.91801137739712,0.659702600373432,0.598390972864896,1.27867425159808,1.16083695451434,0.56738522469114,0.622822248995575,0.251248665256743,1.0429658368404,0.65156653411535,1.21079900526674,0.368277635987565,0.632924774881769,1.05627643155971,0.637812899895131,0.419317291016752,1.68492946719743,0.450530678524519,0.803627933485401,1.42506371870624,0.99458338599545,0.547992461293902,0,0.546138611262131,1.77901850772711,0,0.400395987036012,0,0,0.954053754535364,4.55370375287559,2.34894875748376,3.44045905312706,5.28685314316103,4.48406850385229,1.31692042387539,3.93419540227666,6.28817220398664,9.45766895397742,1.00311897234407,6.8443675993054,4.2610302516126,1.94826728407911,3.89936599098108,7.9543595018206,5.53834736459053,3.79125409271022,1.92136979588513,1.43065282315866,4.27538551969558,6.07970039128866,6.66547097190621,6.96946846861684,5.35081656179426,6.27213142829861,5.89208582027344,5.74830740402882,4.12352934579156,6.32549230048757,3.82278497188916,2.60433381542567,1.90090408889675,2.40920190524436,4.35154477925022,0,2.36777252044017,3.28451198768419,7.05623601286563,7.48832548193821,6.80674698249155,0,0,0,0,0,0.434539556882471,0.795285947051099,0,0.0945348171640679,0,0,1.89919659471683,0,0,1.9472843619281,1.91542711029194,2.39324328933957,3.10037811596945,1.14398982156026,3.34311751196608,0.79504962946682,0,0.694281003215189,0,0.419499436209906,1.10047216776027,0,1.03366703667732,2.13459757612026,0.33472061276467,0.402829317109147,0,0.732186172644509,0.735326160691737,0.81014194788176,0.803697554556718,0.22452937262617,0.337834441449967,1.53316637465883,0,0.549605231791222,1.31780417436063,7.75560528296651,0.436094052142534,1.98788780678127,0.25326102332916,1.32409180813219,0.573673241497627,0.354668382198357,0.560677600142307,0,0.49333509683432,0,0.808264032418128,0,0,0,0,0,0.570471821544449,0,0.23486899728753,0,0,0,0,0.619954687054593,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0,0.113432183160021,0.717558542755448,0.85422955527427,0.211931901159562,0.300091096084402,0.309157587715317,0.257640540045629,0.558350568994769,0.843881661206331,0.194874010322397,0.504867548488229,0.736399189138395,0.161646056818812,1.06502877754984,0.201504196455281,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,0.928735856063958,2.88751792667834,0.236613600079688,0,0,0.110293972732394,0,0,0.269662616320329,0,0,0,1.40241773803446,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0.277765335475589,0,0,0,0,0.587043471179108,0.144366447761074,0.462985512576611,0.380508304469197,0,0,0.246217006087397,0.468008530278475,1.63494278517601,0,0.503946384596579,0.141775097242386,0,0.290633938513962,0,25.1258251326931,3.43388892651582,3.52457796419313,6.48539790376326,4.16600030307054,0.126995788584338,0.763976851116555,0,0,0.308482478109971,1.50171528921959,1.14330573052231,0.112131084345361,0,0.1466765716419,0.258543431515556,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0.542621605391443,0,0,0,0,0.301439377059586,1.74306691720059,0.599837947092342,0,2.51128545716063,0,0.239624855491583,0,1.42636905040718,0.289562613335158,0,0,0.896681151948218,6.5020150866636,6.253199670926,8.47064039446339,0.254094624222463,0,0,0,0,2.99602809578873,5.9832291840805,3.31532410748828,0.12269149171914,0,0.271265023699736,0,1.07057393278297,0.157702415033935,0.35142424497814,0,0,0,0.664225598535437,0,0.173767228936166,0,0,5.16920065307218,4.96142661882819,5.33637789017222,0.606255142892519,1.66435439510497,0.604780586659361,0.496215615637554,2.14846762603287,0.841980283299221,0.256278298511402,0.511707249066704,0.64341568457443,0,0,0.177561725313127,0,0,0,0,0,0.184161977871793,0.114814448164607,0.182091168006717,0.262248829918848,0.451199612907412,0.15403067420883,0,0,0,0,0.170093705276516,0,1.54227252690289,0.270946437543853,0,0,0,0,0,0.261435451024901,0,0,0,1.03041011647722,0.54941678891006,0.247528499761764,0,0,0,0.193341436584244,0,0.15350367472613,0,0,0,0.170453254832202,0.267096106940212,0.826424576804891,0.192190067365106,0.893288987462089,0.30347334256665,0,0.31481234683064,0,0.616067160352178,1.06461206063404,0,0.74129687641568,0.286249773483982,0,0,0.571890581771475,0,0,0,0,0.359744915166629,0.823611089208164,0,0.202182481573316,1.58510321173008,0,0,0.243713489631284,1.05650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| ||
|short_description=p@chr9:2017714..2017737,+ | |short_description=p@chr9:2017714..2017737,+ | ||
}} | }} |
Latest revision as of 01:03, 1 August 2015
Short description: | p@chr9:2017714..2017737, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:2017714..2017737, + |
Coexpression cluster: | C3568_Mast_Eosinophils_CD4_immature_CD8_Neutrophils_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.47e-21 | 168 |
leukocyte | 1.88e-19 | 136 |
hematopoietic cell | 3.73e-19 | 177 |
hematopoietic oligopotent progenitor cell | 2.93e-18 | 161 |
hematopoietic multipotent progenitor cell | 2.93e-18 | 161 |
mature alpha-beta T cell | 9.00e-16 | 18 |
alpha-beta T cell | 9.00e-16 | 18 |
immature T cell | 9.00e-16 | 18 |
mature T cell | 9.00e-16 | 18 |
immature alpha-beta T cell | 9.00e-16 | 18 |
hematopoietic lineage restricted progenitor cell | 1.37e-12 | 120 |
T cell | 1.67e-12 | 25 |
pro-T cell | 1.67e-12 | 25 |
nongranular leukocyte | 5.91e-11 | 115 |
CD8-positive, alpha-beta T cell | 2.86e-10 | 11 |
myeloid cell | 6.48e-10 | 108 |
common myeloid progenitor | 6.48e-10 | 108 |
granulocyte | 2.61e-09 | 8 |
lymphoid lineage restricted progenitor cell | 3.27e-09 | 52 |
lymphocyte | 7.01e-09 | 53 |
common lymphoid progenitor | 7.01e-09 | 53 |
myeloid leukocyte | 1.40e-08 | 72 |
CD4-positive, alpha-beta T cell | 1.53e-08 | 6 |
mast cell | 4.78e-07 | 5 |
basophil mast progenitor cell | 4.78e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.76e-16 | 114 |
hemolymphoid system | 3.63e-12 | 108 |
hematopoietic system | 5.65e-12 | 98 |
blood island | 5.65e-12 | 98 |
blood | 4.00e-09 | 15 |
haemolymphatic fluid | 4.00e-09 | 15 |
organism substance | 4.00e-09 | 15 |
immune system | 4.97e-07 | 93 |