FFCP PHASE1:Hg19::chr9:19380220..19380245,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6194 | |EntrezGene=6194 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10429 | |HGNC=10429 | ||
|TSSclassifier=strong | |||
|UniProt=A2A3R7,A2A3R6,P62753 | |UniProt=A2A3R7,A2A3R6,P62753 | ||
|association_with_transcript=0bp_to_ENST00000380381,NM_001010,uc003znv.1_5end | |association_with_transcript=0bp_to_ENST00000380381,NM_001010,uc003znv.1_5end | ||
|cluster_id=chr9:19380220..19380245,- | |||
|coexpression_cluster_id=C527 | |||
|description=CAGE_peak_1_at_RPS6_5end | |description=CAGE_peak_1_at_RPS6_5end | ||
|id=chr9:19380220..19380245,- | |id=chr9:19380220..19380245,- | ||
|ontology_enrichment_celltype=CL:0000838!8.58e-24!52;CL:0000542!1.19e-23!53;CL:0000051!1.19e-23!53;CL:0000945!1.16e-12!24;CL:0000826!1.16e-12!24;CL:0000084!3.44e-11!25;CL:0000827!3.44e-11!25;CL:0000791!2.45e-10!18;CL:0000789!2.45e-10!18;CL:0002420!2.45e-10!18;CL:0002419!2.45e-10!18;CL:0000790!2.45e-10!18;CL:0000236!2.47e-09!14;CL:0002031!3.19e-08!124;CL:0002087!3.89e-08!119;CL:0000625!1.01e-07!11;CL:0000037!2.62e-07!172;CL:0000566!2.62e-07!172;CL:0000738!8.97e-07!140 | |ontology_enrichment_celltype=CL:0000838!8.58e-24!52;CL:0000542!1.19e-23!53;CL:0000051!1.19e-23!53;CL:0000945!1.16e-12!24;CL:0000826!1.16e-12!24;CL:0000084!3.44e-11!25;CL:0000827!3.44e-11!25;CL:0000791!2.45e-10!18;CL:0000789!2.45e-10!18;CL:0002420!2.45e-10!18;CL:0002419!2.45e-10!18;CL:0000790!2.45e-10!18;CL:0000236!2.47e-09!14;CL:0002031!3.19e-08!124;CL:0002087!3.89e-08!119;CL:0000625!1.01e-07!11;CL:0000037!2.62e-07!172;CL:0000566!2.62e-07!172;CL:0000738!8.97e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000542;2.48e-14;53!CL:0000945;1.18e-12;24!CL:0000084;3.37e-11;25!CL:0000791;2.44e-10;18!CL:0000789;2.44e-10;18!CL:0002419;2.44e-10;18!CL:0000236;4.17e-09;13!CL:0000625;9.99e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,8.58e-24,52;CL:0000542,1.19e-23,53;CL:0000051,1.19e-23,53;CL:0000945,1.16e-12,24;CL:0000826,1.16e-12,24;CL:0000084,3.44e-11,25;CL:0000827,3.44e-11,25;CL:0000791,2.45e-10,18;CL:0000789,2.45e-10,18;CL:0002420,2.45e-10,18;CL:0002419,2.45e-10,18;CL:0000790,2.45e-10,18;CL:0000236,2.47e-09,14;CL:0002031,8.37e-08,120;CL:0000625,1.01e-07,11;CL:0002087,1.02e-07,115;CL:0000037,6.37e-07,168 | |||
|ontology_enrichment_development_v019=CL:0000051;2.48e-14;53!CL:0000790;2.44e-10;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@RPS6 | |short_description=p1@RPS6 | ||
}} | }} |
Latest revision as of 21:12, 16 September 2015
Short description: | p1@RPS6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPS6_5end |
Coexpression cluster: | C527_CD4_CD8_CD19_CD34_CD133_skeletal_Mesenchymal |
Association with transcript: | 0bp_to_ENST00000380381, NM_001010, uc003znv.1_5end |
EntrezGene: | RPS6 |
HGNC: | 10429 |
UniProt: | A2A3R7A2A3R6P62753 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 8.58e-24 | 52 |
lymphocyte | 1.19e-23 | 53 |
common lymphoid progenitor | 1.19e-23 | 53 |
lymphocyte of B lineage | 1.16e-12 | 24 |
pro-B cell | 1.16e-12 | 24 |
T cell | 3.44e-11 | 25 |
pro-T cell | 3.44e-11 | 25 |
mature alpha-beta T cell | 2.45e-10 | 18 |
alpha-beta T cell | 2.45e-10 | 18 |
immature T cell | 2.45e-10 | 18 |
mature T cell | 2.45e-10 | 18 |
immature alpha-beta T cell | 2.45e-10 | 18 |
B cell | 2.47e-09 | 14 |
hematopoietic lineage restricted progenitor cell | 8.37e-08 | 120 |
CD8-positive, alpha-beta T cell | 1.01e-07 | 11 |
nongranular leukocyte | 1.02e-07 | 115 |
hematopoietic stem cell | 6.37e-07 | 168 |