FFCP PHASE1:Hg19::chr9:137715899..137715922,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:137715899..137715922,- | |||
|coexpression_cluster_id=C1441 | |||
|description=CAGE_peak_at_chr9:137715899..137715922,- | |description=CAGE_peak_at_chr9:137715899..137715922,- | ||
|id=chr9:137715899..137715922,- | |id=chr9:137715899..137715922,- | ||
|ontology_enrichment_celltype=CL:0000945!1.91e-17!24;CL:0000826!1.91e-17!24;CL:0000785!3.14e-15!2;CL:0000955!3.14e-15!2;CL:0000818!3.14e-15!2;CL:0000954!3.14e-15!2;CL:0000816!3.14e-15!2;CL:0000817!1.87e-10!3;CL:0000838!1.72e-09!52;CL:0000542!2.77e-09!53;CL:0000051!2.77e-09!53;CL:0000819!1.52e-08!1;CL:0002379!2.02e-08!1;CL:0000946!2.17e-08!1;CL:0000786!2.17e-08!1;CL:0000980!2.17e-08!1 | |ontology_enrichment_celltype=CL:0000945!1.91e-17!24;CL:0000826!1.91e-17!24;CL:0000785!3.14e-15!2;CL:0000955!3.14e-15!2;CL:0000818!3.14e-15!2;CL:0000954!3.14e-15!2;CL:0000816!3.14e-15!2;CL:0000817!1.87e-10!3;CL:0000838!1.72e-09!52;CL:0000542!2.77e-09!53;CL:0000051!2.77e-09!53;CL:0000819!1.52e-08!1;CL:0002379!2.02e-08!1;CL:0000946!2.17e-08!1;CL:0000786!2.17e-08!1;CL:0000980!2.17e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0002253;1.17e-17;2!CL:0000322;3.06e-12;3!CL:0002563;1.63e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,1.07e-17,2;CL:0000322,3.24e-12,3;CL:0002563,1.57e-09,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!1.17e-11!10;DOID:0050686!9.16e-10!137;DOID:162!6.49e-09!235;DOID:2355!1.05e-08!1;DOID:14566!1.21e-08!239;DOID:0060073!1.52e-08!1;DOID:8675!1.52e-08!1;DOID:4960!1.75e-08!1;DOID:0070004!1.75e-08!1;DOID:3620!2.02e-08!1;DOID:3565!2.02e-08!1;DOID:0050619!3.83e-08!1;DOID:1357!3.83e-08!1 | |ontology_enrichment_disease=DOID:0060058!1.17e-11!10;DOID:0050686!9.16e-10!137;DOID:162!6.49e-09!235;DOID:2355!1.05e-08!1;DOID:14566!1.21e-08!239;DOID:0060073!1.52e-08!1;DOID:8675!1.52e-08!1;DOID:4960!1.75e-08!1;DOID:0070004!1.75e-08!1;DOID:3620!2.02e-08!1;DOID:3565!2.02e-08!1;DOID:0050619!3.83e-08!1;DOID:1357!3.83e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:2355;3.05e-34;1!DOID:74;7.05e-18;2!DOID:3910;1.17e-17;2!DOID:0060058;2.57e-14;10!DOID:1287;1.27e-09;4!DOID:3908;7.25e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,2.58e-34,1;DOID:74,6.48e-18,2;DOID:3910,1.27e-17,2;DOID:0060058,2.49e-14,10;DOID:1287,1.22e-09,4;DOID:3908,7.49e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0001154!1.88e-08!1;UBERON:0001153!1.88e-08!1;UBERON:0001764!3.83e-08!1;UBERON:0001825!3.83e-08!1;UBERON:0002372!7.16e-08!1;UBERON:0001961!7.16e-08!1;UBERON:0001744!7.16e-08!1;UBERON:0001735!7.16e-08!1 | |ontology_enrichment_uberon=UBERON:0001154!1.88e-08!1;UBERON:0001153!1.88e-08!1;UBERON:0001764!3.83e-08!1;UBERON:0001825!3.83e-08!1;UBERON:0002372!7.16e-08!1;UBERON:0001961!7.16e-08!1;UBERON:0001744!7.16e-08!1;UBERON:0001735!7.16e-08!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.17e-17;2!UBERON:0002173;1.17e-17;2!UBERON:0002186;1.17e-17;2!UBERON:0004821;3.06e-12;3!UBERON:0007499;3.06e-12;3!UBERON:0003215;3.06e-12;3!UBERON:0010368;3.06e-12;3!UBERON:0009911;3.06e-12;3!UBERON:0002299;3.06e-12;3!UBERON:0006524;3.06e-12;3!UBERON:0008874;3.06e-12;3!UBERON:0002169;3.06e-12;3!UBERON:0004894;3.06e-12;3!UBERON:0001052;1.63e-09;4!UBERON:0001242;1.63e-09;4!UBERON:0001262;1.63e-09;4!UBERON:0004786;1.63e-09;4!UBERON:0004808;1.63e-09;4!UBERON:0001277;1.63e-09;4!UBERON:0009856;1.63e-09;4!UBERON:0004907;7.25e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.27e-17,2;UBERON:0002173,1.27e-17,2;UBERON:0002186,1.27e-17,2;UBERON:0004821,3.24e-12,3;UBERON:0003215,3.24e-12,3;UBERON:0010368,3.24e-12,3;UBERON:0009911,3.24e-12,3;UBERON:0002299,3.24e-12,3;UBERON:0006524,3.24e-12,3;UBERON:0008874,3.24e-12,3;UBERON:0002169,3.24e-12,3;UBERON:0004894,3.24e-12,3;UBERON:0001052,1.57e-09,4;UBERON:0001242,1.57e-09,4;UBERON:0001262,1.57e-09,4;UBERON:0004786,1.57e-09,4;UBERON:0004808,1.57e-09,4;UBERON:0001277,1.57e-09,4;UBERON:0004907,7.01e-08,5 | |||
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|short_description=p@chr9:137715899..137715922,- | |short_description=p@chr9:137715899..137715922,- | ||
}} | }} |
Latest revision as of 00:07, 1 August 2015
Short description: | p@chr9:137715899..137715922, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:137715899..137715922, - |
Coexpression cluster: | C1441_fibrosarcoma_hereditary_lymphangiectasia_adult_bronchioalveolar_myeloma_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 1.07e-17 | 2 |
pneumocyte | 3.24e-12 | 3 |
intestinal epithelial cell | 1.57e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.27e-17 | 2 |
alveolar duct | 1.27e-17 | 2 |
bronchiole | 1.27e-17 | 2 |
pulmonary alveolus epithelium | 3.24e-12 | 3 |
alveolus | 3.24e-12 | 3 |
pulmonary lobule | 3.24e-12 | 3 |
lobule | 3.24e-12 | 3 |
alveolus of lung | 3.24e-12 | 3 |
alveolar system | 3.24e-12 | 3 |
pulmonary acinus | 3.24e-12 | 3 |
alveolar sac | 3.24e-12 | 3 |
alveolar wall | 3.24e-12 | 3 |
rectum | 1.57e-09 | 4 |
intestinal mucosa | 1.57e-09 | 4 |
wall of intestine | 1.57e-09 | 4 |
gastrointestinal system mucosa | 1.57e-09 | 4 |
gastrointestinal system epithelium | 1.57e-09 | 4 |
intestinal epithelium | 1.57e-09 | 4 |
lower digestive tract | 7.01e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
anemia | 2.58e-34 | 1 |
hematopoietic system disease | 6.48e-18 | 2 |
lung adenocarcinoma | 1.27e-17 | 2 |
lymphoma | 2.49e-14 | 10 |
cardiovascular system disease | 1.22e-09 | 4 |
non-small cell lung carcinoma | 7.49e-08 | 5 |