FFCP PHASE1:Hg19::chr14:61654271..61654282,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5583 | |EntrezGene=5583 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9403 | |HGNC=9403 | ||
|TSSclassifier=strong | |||
|UniProt=G3V4L3 | |UniProt=G3V4L3 | ||
|association_with_transcript=0bp_to_ENST00000555185_5end | |association_with_transcript=0bp_to_ENST00000555185_5end | ||
|cluster_id=chr14:61654271..61654282,+ | |||
|description=CAGE_peak_30_at_PRKCH_5end | |description=CAGE_peak_30_at_PRKCH_5end | ||
|id=chr14:61654271..61654282,+ | |id=chr14:61654271..61654282,+ | ||
|ontology_enrichment_celltype=CL:0000064!3.24e-09!3;CL:0005012!3.24e-09!3;CL:0000067!3.24e-09!3;CL:0002304!3.24e-09!3;CL:0000708!5.04e-09!3;CL:0002590!1.87e-08!3 | |ontology_enrichment_celltype=CL:0000064!3.24e-09!3;CL:0005012!3.24e-09!3;CL:0000067!3.24e-09!3;CL:0002304!3.24e-09!3;CL:0000708!5.04e-09!3;CL:0002590!1.87e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000064;4.99e-55;3!CL:0000067;4.99e-55;3!CL:0005012;4.99e-55;3!CL:0002304;4.99e-55;3!CL:0002549;9.82e-37;2!CL:0000708;7.01e-25;3!CL:0000075;3.93e-11;27!CL:0000710;7.45e-09;20!CL:0002590;2.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,2.40e-55,3;CL:0000067,2.40e-55,3;CL:0005012,2.40e-55,3;CL:0002304,2.40e-55,3;CL:0002549,2.04e-36,2;CL:0000708,4.87e-25,3;CL:0000075,3.93e-11,27;CL:0000710,6.70e-09,20;CL:0002590,2.97e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0006876;1.05e-58;11!UBERON:0001778;4.99e-55;3!UBERON:0001775;4.99e-55;3!UBERON:0000488;1.67e-41;4!UBERON:0005629;9.82e-37;2!UBERON:0005358;9.82e-37;2!UBERON:0001886;9.82e-37;2!UBERON:0004086;9.82e-37;2!UBERON:0005282;9.82e-37;2!UBERON:0005281;9.82e-37;2!UBERON:0005284;7.43e-33;5!UBERON:0002203;5.90e-28;6!UBERON:0001768;5.90e-28;6!UBERON:0002200;5.90e-28;6!UBERON:0007625;9.86e-27;11!UBERON:0003210;7.01e-25;3!UBERON:0001801;4.15e-21;14!UBERON:0000019;1.15e-15;19!UBERON:0000047;1.15e-15;19!UBERON:0004088;1.15e-15;19!UBERON:0010230;1.15e-15;19!UBERON:0000970;6.66e-15;20!UBERON:0002104;3.27e-14;21!UBERON:0001456;3.27e-14;21!UBERON:0000020;5.23e-13;23!UBERON:0001032;1.76e-12;24!UBERON:0004456;1.76e-12;24!UBERON:0010371;1.18e-09;31!UBERON:0002049;5.43e-07;75!UBERON:0007798;5.43e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006876,1.29e-58,11;UBERON:0001778,2.40e-55,3;UBERON:0001775,2.40e-55,3;UBERON:0000488,9.63e-42,4;UBERON:0005629,2.04e-36,2;UBERON:0005358,2.04e-36,2;UBERON:0001886,2.04e-36,2;UBERON:0004086,2.04e-36,2;UBERON:0005282,2.04e-36,2;UBERON:0005281,2.04e-36,2;UBERON:0005284,1.43e-32,5;UBERON:0002203,4.10e-28,6;UBERON:0001768,4.10e-28,6;UBERON:0002200,4.10e-28,6;UBERON:0007625,9.88e-27,11;UBERON:0003210,4.87e-25,3;UBERON:0001801,4.15e-21,14;UBERON:0000019,6.66e-15,20;UBERON:0000047,6.66e-15,20;UBERON:0010312,6.66e-15,20;UBERON:0004088,6.66e-15,20;UBERON:0010230,6.66e-15,20;UBERON:0003072,6.66e-15,20;UBERON:0004128,6.66e-15,20;UBERON:0003071,6.66e-15,20;UBERON:0000970,3.27e-14,21;UBERON:0002104,3.27e-14,21;UBERON:0001456,1.39e-13,22;UBERON:0000020,1.76e-12,24;UBERON:0001032,1.76e-12,24;UBERON:0004456,1.76e-12,24;UBERON:0005085,9.77e-10,31;UBERON:0002049,3.29e-08,78;UBERON:0007798,3.29e-08,78 | |||
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| ||
|short_description=p30@PRKCH | |short_description=p30@PRKCH | ||
}} | }} |
Latest revision as of 21:25, 24 September 2015
Short description: | p30@PRKCH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_PRKCH_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000555185_5end |
EntrezGene: | PRKCH |
HGNC: | 9403 |
UniProt: | G3V4L3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 2.40e-55 | 3 |
ciliated epithelial cell | 2.40e-55 | 3 |
multi-ciliated epithelial cell | 2.40e-55 | 3 |
non-pigmented ciliary epithelial cell | 2.40e-55 | 3 |
fibroblast of choroid plexus | 2.04e-36 | 2 |
leptomeningeal cell | 4.87e-25 | 3 |
columnar/cuboidal epithelial cell | 3.93e-11 | 27 |
neurecto-epithelial cell | 6.70e-09 | 20 |
smooth muscle cell of the brain vasculature | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
vasculature of organ | 1.29e-58 | 11 |
ciliary epithelium | 2.40e-55 | 3 |
ciliary body | 2.40e-55 | 3 |
atypical epithelium | 9.63e-42 | 4 |
vascular plexus | 2.04e-36 | 2 |
ventricle of nervous system | 2.04e-36 | 2 |
choroid plexus | 2.04e-36 | 2 |
brain ventricle | 2.04e-36 | 2 |
ventricular system of brain | 2.04e-36 | 2 |
ventricular system of central nervous system | 2.04e-36 | 2 |
brain vasculature | 1.43e-32 | 5 |
vasculature of eye | 4.10e-28 | 6 |
uvea | 4.10e-28 | 6 |
vasculature of head | 4.10e-28 | 6 |
pigment epithelium of eye | 9.88e-27 | 11 |
blood-cerebrospinal fluid barrier | 4.87e-25 | 3 |
anterior segment of eyeball | 4.15e-21 | 14 |
camera-type eye | 6.66e-15 | 20 |
simple eye | 6.66e-15 | 20 |
immature eye | 6.66e-15 | 20 |
ocular region | 6.66e-15 | 20 |
eyeball of camera-type eye | 6.66e-15 | 20 |
optic cup | 6.66e-15 | 20 |
optic vesicle | 6.66e-15 | 20 |
eye primordium | 6.66e-15 | 20 |
eye | 3.27e-14 | 21 |
visual system | 3.27e-14 | 21 |
face | 1.39e-13 | 22 |
sense organ | 1.76e-12 | 24 |
sensory system | 1.76e-12 | 24 |
entire sense organ system | 1.76e-12 | 24 |
ectodermal placode | 9.77e-10 | 31 |
vasculature | 3.29e-08 | 78 |
vascular system | 3.29e-08 | 78 |