FFCP PHASE1:Hg19::chr14:61447927..61447983,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=145389 | |EntrezGene=145389 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19863 | |HGNC=19863 | ||
|TSSclassifier=strong | |||
|UniProt=E9PM79 | |UniProt=E9PM79 | ||
|association_with_transcript=0bp_to_ENST00000525723,ENST00000532148,ENST00000554304,NR_033344,uc001xfj.1,uc001xfk.2_5end | |association_with_transcript=0bp_to_ENST00000525723,ENST00000532148,ENST00000554304,NR_033344,uc001xfj.1,uc001xfk.2_5end | ||
|cluster_id=chr14:61447927..61447983,+ | |||
|coexpression_cluster_id=C3438 | |||
|description=CAGE_peak_1_at_SLC38A6_5end | |description=CAGE_peak_1_at_SLC38A6_5end | ||
|id=chr14:61447927..61447983,+ | |id=chr14:61447927..61447983,+ | ||
|ontology_enrichment_celltype=CL:0000055!5.16e-21!180;CL:0000548!8.49e-17!679;CL:0000004!8.49e-17!679;CL:0000255!8.49e-17!679;CL:0000012!8.67e-16!682;CL:0000057!9.65e-14!75;CL:0000144!8.69e-13!625;CL:0002371!2.36e-12!591;CL:0002194!2.22e-11!63;CL:0000576!2.22e-11!63;CL:0000040!2.22e-11!63;CL:0000559!2.22e-11!63;CL:0002009!4.52e-10!65;CL:0000048!1.63e-09!430;CL:0000839!1.21e-08!70;CL:0000723!1.72e-08!436;CL:0000222!1.07e-07!119;CL:0000003!1.13e-07!722;CL:0000034!1.14e-07!444;CL:0002057!1.55e-07!42;CL:0000063!2.91e-07!578;CL:0000860!2.97e-07!45;CL:0000557!3.11e-07!71;CL:0000220!9.89e-07!246 | |ontology_enrichment_celltype=CL:0000055!5.16e-21!180;CL:0000548!8.49e-17!679;CL:0000004!8.49e-17!679;CL:0000255!8.49e-17!679;CL:0000012!8.67e-16!682;CL:0000057!9.65e-14!75;CL:0000144!8.69e-13!625;CL:0002371!2.36e-12!591;CL:0002194!2.22e-11!63;CL:0000576!2.22e-11!63;CL:0000040!2.22e-11!63;CL:0000559!2.22e-11!63;CL:0002009!4.52e-10!65;CL:0000048!1.63e-09!430;CL:0000839!1.21e-08!70;CL:0000723!1.72e-08!436;CL:0000222!1.07e-07!119;CL:0000003!1.13e-07!722;CL:0000034!1.14e-07!444;CL:0002057!1.55e-07!42;CL:0000063!2.91e-07!578;CL:0000860!2.97e-07!45;CL:0000557!3.11e-07!71;CL:0000220!9.89e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.93e-11;39!CL:0000234;1.93e-11;39!CL:0000860;3.79e-10;33!CL:0002057;3.79e-10;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.47e-13,76;CL:0002194,6.57e-12,59;CL:0000576,6.57e-12,59;CL:0000040,6.57e-12,59;CL:0000559,6.57e-12,59;CL:0000473,1.27e-10,48;CL:0000234,1.27e-10,48;CL:0002009,1.65e-10,61;CL:0000048,1.18e-09,427;CL:0000839,5.66e-09,66;CL:0000723,1.28e-08,433;CL:0000222,6.66e-08,121;CL:0000034,8.44e-08,441;CL:0000860,1.54e-07,42;CL:0002057,1.54e-07,42;CL:0000557,1.73e-07,67;CL:0002321,9.22e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!2.87e-14!167;UBERON:0004765!1.65e-10!101;UBERON:0001434!1.65e-10!101;UBERON:0000468!5.05e-10!659;UBERON:0001474!3.38e-08!86;UBERON:0000062!3.43e-08!511;UBERON:0002371!5.64e-08!80;UBERON:0000467!1.24e-07!625;UBERON:0000480!1.91e-07!626;UBERON:0000914!3.19e-07!83;UBERON:0002329!3.19e-07!83;UBERON:0003077!3.19e-07!83;UBERON:0003059!3.19e-07!83;UBERON:0007282!3.19e-07!83;UBERON:0009618!3.19e-07!83;UBERON:0007285!3.19e-07!83 | |ontology_enrichment_uberon=UBERON:0002204!2.87e-14!167;UBERON:0004765!1.65e-10!101;UBERON:0001434!1.65e-10!101;UBERON:0000468!5.05e-10!659;UBERON:0001474!3.38e-08!86;UBERON:0000062!3.43e-08!511;UBERON:0002371!5.64e-08!80;UBERON:0000467!1.24e-07!625;UBERON:0000480!1.91e-07!626;UBERON:0000914!3.19e-07!83;UBERON:0002329!3.19e-07!83;UBERON:0003077!3.19e-07!83;UBERON:0003059!3.19e-07!83;UBERON:0007282!3.19e-07!83;UBERON:0009618!3.19e-07!83;UBERON:0007285!3.19e-07!83 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,7.40e-16,167;UBERON:0001434,6.41e-12,100;UBERON:0004765,3.25e-10,90;UBERON:0001474,1.96e-08,82;UBERON:0002371,3.17e-08,76 | |||
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| ||
|short_description=p1@SLC38A6 | |short_description=p1@SLC38A6 | ||
}} | }} |
Latest revision as of 21:08, 24 September 2015
Short description: | p1@SLC38A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC38A6_5end |
Coexpression cluster: | C3438_Macrophage_CD14_Monocytederived_Dendritic_Fibroblast_mesenchymal_ductal |
Association with transcript: | 0bp_to_ENST00000525723, ENST00000532148, ENST00000554304, NR_033344, uc001xfj.1, uc001xfk.2_5end |
EntrezGene: | SLC38A6 |
HGNC: | 19863 |
UniProt: | E9PM79 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.47e-13 | 76 |
monopoietic cell | 6.57e-12 | 59 |
monocyte | 6.57e-12 | 59 |
monoblast | 6.57e-12 | 59 |
promonocyte | 6.57e-12 | 59 |
defensive cell | 1.27e-10 | 48 |
phagocyte | 1.27e-10 | 48 |
macrophage dendritic cell progenitor | 1.65e-10 | 61 |
multi fate stem cell | 1.18e-09 | 427 |
myeloid lineage restricted progenitor cell | 5.66e-09 | 66 |
somatic stem cell | 1.28e-08 | 433 |
mesodermal cell | 6.66e-08 | 121 |
stem cell | 8.44e-08 | 441 |
classical monocyte | 1.54e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.54e-07 | 42 |
granulocyte monocyte progenitor cell | 1.73e-07 | 67 |
embryonic cell | 9.22e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 7.40e-16 | 167 |
skeletal system | 6.41e-12 | 100 |
skeletal element | 3.25e-10 | 90 |
bone element | 1.96e-08 | 82 |
bone marrow | 3.17e-08 | 76 |