FFCP PHASE1:Hg19::chr14:106331053..106331077,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=5535 | |HGNC=5535 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000454480_5end | |association_with_transcript=0bp_to_ENST00000454480_5end | ||
|cluster_id=chr14:106331053..106331077,- | |||
|coexpression_cluster_id=C44 | |||
|description=CAGE_peak_1_at_IGHJ2P_5end | |description=CAGE_peak_1_at_IGHJ2P_5end | ||
|id=chr14:106331053..106331077,- | |id=chr14:106331053..106331077,- | ||
|ontology_enrichment_celltype=CL:0000236!4.84e-19!14;CL:0000037!8.76e-14!172;CL:0000566!8.76e-14!172;CL:0000838!1.23e-13!52;CL:0000542!2.85e-13!53;CL:0000051!2.85e-13!53;CL:0000988!2.13e-12!182;CL:0000945!4.96e-12!24;CL:0000826!4.96e-12!24;CL:0002032!1.67e-09!165;CL:0000837!1.67e-09!165;CL:0000784!1.06e-08!3;CL:0000738!1.49e-08!140;CL:0000842!1.19e-07!3;CL:0000767!1.70e-07!3;CL:0002087!3.43e-07!119 | |ontology_enrichment_celltype=CL:0000236!4.84e-19!14;CL:0000037!8.76e-14!172;CL:0000566!8.76e-14!172;CL:0000838!1.23e-13!52;CL:0000542!2.85e-13!53;CL:0000051!2.85e-13!53;CL:0000988!2.13e-12!182;CL:0000945!4.96e-12!24;CL:0000826!4.96e-12!24;CL:0002032!1.67e-09!165;CL:0000837!1.67e-09!165;CL:0000784!1.06e-08!3;CL:0000738!1.49e-08!140;CL:0000842!1.19e-07!3;CL:0000767!1.70e-07!3;CL:0002087!3.43e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000236;4.01e-36;13!CL:0000945;8.04e-23;24!CL:0000784;9.59e-17;3!CL:0000542;9.77e-08;53!CL:0000226;2.42e-07;3!CL:0000842;2.42e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.00e-33,14;CL:0000945,7.87e-23,24;CL:0000826,7.87e-23,24;CL:0000784,9.60e-17,3;CL:0000037,5.42e-13,168;CL:0000988,4.71e-12,177;CL:0000838,2.24e-09,52;CL:0000542,3.68e-09,53;CL:0000051,3.68e-09,53;CL:0002032,6.89e-08,161;CL:0000837,6.89e-08,161;CL:0000226,2.42e-07,3;CL:0000842,2.42e-07,3;CL:0000738,9.50e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000051;9.77e-08;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.07e-08!15;UBERON:0000179!2.07e-08!15;UBERON:0000463!2.07e-08!15;UBERON:0007023!1.37e-07!115 | |ontology_enrichment_uberon=UBERON:0000178!2.07e-08!15;UBERON:0000179!2.07e-08!15;UBERON:0000463!2.07e-08!15;UBERON:0007023!1.37e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002390;4.23e-10;32!UBERON:0002193;3.30e-09;42!UBERON:0004177;5.06e-09;5!UBERON:0005057;5.06e-09;5!UBERON:0002405;7.16e-08;27!UBERON:0002106;3.13e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.14e-07,3;UBERON:0004854,3.14e-07,3;UBERON:0009034,3.14e-07,3;UBERON:0002095,3.14e-07,3;UBERON:0004782,3.14e-07,3;UBERON:0003281,3.14e-07,3;UBERON:0009664,3.14e-07,3;UBERON:0002296,3.14e-07,3;UBERON:0005602,3.14e-07,3;UBERON:0001179,3.14e-07,3;UBERON:0006293,3.14e-07,3 | |||
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| ||
|short_description=p1@IGHJ2P | |short_description=p1@IGHJ2P | ||
}} | }} |
Latest revision as of 21:16, 18 September 2015
Short description: | p1@IGHJ2P |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IGHJ2P_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | 0bp_to_ENST00000454480_5end |
EntrezGene: | NA |
HGNC: | 5535 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.00e-33 | 14 |
lymphocyte of B lineage | 7.87e-23 | 24 |
pro-B cell | 7.87e-23 | 24 |
plasmacytoid dendritic cell | 9.60e-17 | 3 |
hematopoietic stem cell | 5.42e-13 | 168 |
hematopoietic cell | 4.71e-12 | 177 |
lymphoid lineage restricted progenitor cell | 2.24e-09 | 52 |
lymphocyte | 3.68e-09 | 53 |
common lymphoid progenitor | 3.68e-09 | 53 |
hematopoietic oligopotent progenitor cell | 6.89e-08 | 161 |
hematopoietic multipotent progenitor cell | 6.89e-08 | 161 |
single nucleate cell | 2.42e-07 | 3 |
mononuclear cell | 2.42e-07 | 3 |
leukocyte | 9.50e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
spleen | 3.14e-07 | 3 |
gastrointestinal system mesentery | 3.14e-07 | 3 |
stomach region | 3.14e-07 | 3 |
mesentery | 3.14e-07 | 3 |
gastrointestinal system serosa | 3.14e-07 | 3 |
mesentery of stomach | 3.14e-07 | 3 |
gut mesentery | 3.14e-07 | 3 |
dorsal mesentery | 3.14e-07 | 3 |
dorsal mesogastrium | 3.14e-07 | 3 |
peritoneal cavity | 3.14e-07 | 3 |
spleen primordium | 3.14e-07 | 3 |