FFCP PHASE1:Hg19::chr9:127023762..127023769,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10783 | |EntrezGene=10783 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7749 | |HGNC=7749 | ||
|TSSclassifier=strong | |||
|UniProt=Q5TBG1,Q5TBH1 | |UniProt=Q5TBG1,Q5TBH1 | ||
|association_with_transcript=10bp_to_ENST00000373596,ENST00000425237_5end | |association_with_transcript=10bp_to_ENST00000373596,ENST00000425237_5end | ||
|cluster_id=chr9:127023762..127023769,+ | |||
|description=CAGE_peak_14_at_NEK6_5end | |description=CAGE_peak_14_at_NEK6_5end | ||
|id=chr9:127023762..127023769,+ | |id=chr9:127023762..127023769,+ | ||
|ontology_enrichment_celltype=CL:0000839!2.26e-22!70;CL:0000557!4.52e-22!71;CL:0002057!8.60e-20!42;CL:0002009!1.66e-19!65;CL:0002194!5.66e-19!63;CL:0000576!5.66e-19!63;CL:0000040!5.66e-19!63;CL:0000559!5.66e-19!63;CL:0000766!1.78e-18!76;CL:0000860!6.80e-18!45;CL:0000763!2.38e-11!112;CL:0000049!2.38e-11!112;CL:0002031!3.39e-09!124;CL:0000144!2.92e-07!625;CL:0000738!5.06e-07!140 | |ontology_enrichment_celltype=CL:0000839!2.26e-22!70;CL:0000557!4.52e-22!71;CL:0002057!8.60e-20!42;CL:0002009!1.66e-19!65;CL:0002194!5.66e-19!63;CL:0000576!5.66e-19!63;CL:0000040!5.66e-19!63;CL:0000559!5.66e-19!63;CL:0000766!1.78e-18!76;CL:0000860!6.80e-18!45;CL:0000763!2.38e-11!112;CL:0000049!2.38e-11!112;CL:0002031!3.39e-09!124;CL:0000144!2.92e-07!625;CL:0000738!5.06e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000473;4.78e-17;39!CL:0000234;4.78e-17;39!CL:0000235;4.11e-14;6!CL:0000860;3.73e-11;33!CL:0002057;3.73e-11;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.23e-17,48;CL:0000234,2.23e-17,48;CL:0000235,2.62e-14,6;CL:0002194,1.31e-13,59;CL:0000576,1.31e-13,59;CL:0000040,1.31e-13,59;CL:0000559,1.31e-13,59;CL:0002009,4.03e-13,61;CL:0000839,4.96e-12,66;CL:0000557,7.85e-12,67;CL:0000766,6.42e-11,72;CL:0000860,7.56e-10,42;CL:0002057,7.56e-10,42;CL:0000763,8.12e-07,108;CL:0000049,8.12e-07,108 | |||
|ontology_enrichment_development_v019=UBERON:0000358;8.12e-11;1!CL:0002057;1.13e-07;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.15e-23!80;UBERON:0002405!4.13e-21!115;UBERON:0001474!4.42e-21!86;UBERON:0004765!3.88e-18!101;UBERON:0001434!3.88e-18!101;UBERON:0002390!7.60e-17!102;UBERON:0003061!7.60e-17!102;UBERON:0002193!8.35e-16!112;UBERON:0002204!1.59e-14!167;UBERON:0003081!8.73e-11!216 | |ontology_enrichment_uberon=UBERON:0002371!1.15e-23!80;UBERON:0002405!4.13e-21!115;UBERON:0001474!4.42e-21!86;UBERON:0004765!3.88e-18!101;UBERON:0001434!3.88e-18!101;UBERON:0002390!7.60e-17!102;UBERON:0003061!7.60e-17!102;UBERON:0002193!8.35e-16!112;UBERON:0002204!1.59e-14!167;UBERON:0003081!8.73e-11!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0007195;2.28e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.68e-15,76;UBERON:0001474,1.10e-13,82;UBERON:0004765,2.59e-12,90;UBERON:0002405,7.39e-12,93;UBERON:0002390,3.67e-11,98;UBERON:0003061,3.67e-11,98;UBERON:0001434,6.68e-11,100;UBERON:0007195,3.61e-10,1;UBERON:0002193,5.85e-10,108 | |||
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| ||
|short_description=p14@NEK6 | |short_description=p14@NEK6 | ||
}} | }} |
Latest revision as of 00:07, 25 September 2015
Short description: | p14@NEK6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_NEK6_5end |
Coexpression cluster: | NA |
Association with transcript: | 10bp_to_ENST00000373596, ENST00000425237_5end |
EntrezGene: | NEK6 |
HGNC: | 7749 |
UniProt: | Q5TBG1Q5TBH1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.23e-17 | 48 |
phagocyte | 2.23e-17 | 48 |
macrophage | 2.62e-14 | 6 |
monopoietic cell | 1.31e-13 | 59 |
monocyte | 1.31e-13 | 59 |
monoblast | 1.31e-13 | 59 |
promonocyte | 1.31e-13 | 59 |
macrophage dendritic cell progenitor | 4.03e-13 | 61 |
myeloid lineage restricted progenitor cell | 4.96e-12 | 66 |
granulocyte monocyte progenitor cell | 7.85e-12 | 67 |
myeloid leukocyte | 6.42e-11 | 72 |
classical monocyte | 7.56e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.56e-10 | 42 |
myeloid cell | 8.12e-07 | 108 |
common myeloid progenitor | 8.12e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.68e-15 | 76 |
bone element | 1.10e-13 | 82 |
skeletal element | 2.59e-12 | 90 |
immune system | 7.39e-12 | 93 |
hematopoietic system | 3.67e-11 | 98 |
blood island | 3.67e-11 | 98 |
skeletal system | 6.68e-11 | 100 |
stroma of bone marrow | 3.61e-10 | 1 |
hemolymphoid system | 5.85e-10 | 108 |