FFCP PHASE1:Hg19::chr13:74708246..74708264,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11278 | |EntrezGene=11278 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6346 | |HGNC=6346 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y4X4 | |UniProt=Q9Y4X4 | ||
|association_with_transcript=129bp_to_ENST00000377666,uc010aeq.2_5end | |association_with_transcript=129bp_to_ENST00000377666,uc010aeq.2_5end | ||
|cluster_id=chr13:74708246..74708264,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_8_at_KLF12_5end | |description=CAGE_peak_8_at_KLF12_5end | ||
|id=chr13:74708246..74708264,- | |id=chr13:74708246..74708264,- | ||
|ontology_enrichment_celltype=CL:0000791!1.20e-11!18;CL:0000789!1.20e-11!18;CL:0002420!1.20e-11!18;CL:0002419!1.20e-11!18;CL:0000790!1.20e-11!18;CL:0000838!3.45e-10!52;CL:0000542!3.81e-10!53;CL:0000051!3.81e-10!53;CL:0000084!9.46e-10!25;CL:0000827!9.46e-10!25;CL:0000625!5.86e-07!11 | |ontology_enrichment_celltype=CL:0000791!1.20e-11!18;CL:0000789!1.20e-11!18;CL:0002420!1.20e-11!18;CL:0002419!1.20e-11!18;CL:0000790!1.20e-11!18;CL:0000838!3.45e-10!52;CL:0000542!3.81e-10!53;CL:0000051!3.81e-10!53;CL:0000084!9.46e-10!25;CL:0000827!9.46e-10!25;CL:0000625!5.86e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.58e-24;18!CL:0000789;2.58e-24;18!CL:0002419;2.58e-24;18!CL:0000084;3.28e-16;25!CL:0000625;1.97e-14;11!CL:0000624;1.18e-13;6!CL:0000542;2.21e-11;53!CL:0000236;5.60e-08;13!CL:0000898;1.31e-07;3!CL:0000623;3.13e-07;3!CL:0000226;4.24e-07;3!CL:0000842;4.24e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.86e-24,18;CL:0000789,1.86e-24,18;CL:0002420,1.86e-24,18;CL:0002419,1.86e-24,18;CL:0000790,1.86e-24,18;CL:0000838,4.18e-20,52;CL:0000542,1.42e-19,53;CL:0000051,1.42e-19,53;CL:0000084,2.61e-16,25;CL:0000827,2.61e-16,25;CL:0000625,1.50e-14,11;CL:0000624,1.12e-13,6;CL:0002087,9.83e-12,115;CL:0000738,2.01e-11,136;CL:0002031,2.37e-08,120;CL:0000037,5.95e-08,168;CL:0000988,1.22e-07,177;CL:0000898,1.29e-07,3;CL:0000236,1.70e-07,14;CL:0000623,3.46e-07,3;CL:0000825,3.46e-07,3;CL:0000226,3.91e-07,3;CL:0000842,3.91e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;2.58e-24;18!CL:0000051;2.21e-11;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.36e-11!115;UBERON:0000178!1.91e-09!15;UBERON:0000179!1.91e-09!15;UBERON:0000463!1.91e-09!15 | |ontology_enrichment_uberon=UBERON:0007023!9.36e-11!115;UBERON:0000178!1.91e-09!15;UBERON:0000179!1.91e-09!15;UBERON:0000463!1.91e-09!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.49e-16;15!UBERON:0000179;1.49e-16;15!UBERON:0000463;1.49e-16;15!UBERON:0002390;2.59e-15;32!UBERON:0002193;8.46e-11;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.83e-16,15;UBERON:0000179,1.83e-16,15;UBERON:0000463,1.83e-16,15 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,0,0,0,0,0,0,0,0,1.09220686065086,0.263766978228454,0.123766352960047,0.994192127183747,0,0,0,0,0,0,0,0.572471974262113,0.136874425072884,0.125542639594803,0,0,0.0787107813136792,0.786728553697808,1.53531759238885,1.70297735647684,0,0,0,0.154934401160603,0,0,2.21598163412751,1.80490002723128,2.82114131930607,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0.272906150057846,0.449446968890169,0.306083892370903,0,0,0,0.598390972864896,0,0,0,0.622822248995575,0,0,0.434377689410233,0,0,0,0.422510572623884,0.425208599930087,0.628975936525128,0.336985893439485,0.150176892841506,0,1.42506371870624,1.19350006319454,0.547992461293902,5.27988733383968,1.09227722252426,4.44754626931777,0.853460445133014,0.800791974072025,1.14950487990897,1.98313461835459,0.954053754535364,1.70763890732835,1.76171156811282,2.29363936875137,0,2.24203425192614,0,10.8190373562608,10.2182798314783,7.40165396398233,2.17342444007882,7.82213439920617,5.20792586308207,5.84480185223734,1.33692548262208,8.24896540929544,3.98761010250518,4.87446954777028,1.5370958367081,1.30059347559878,2.46656856905514,2.76350017785848,2.02862160014537,5.6348894001583,10.1665514674091,11.4989076185474,5.09892042139048,6.51474839123266,8.93431358254838,10.1207876807801,5.09704662918555,1.95325036156926,0.950452044448374,6.32415500126646,7.16725022464743,0,4.02521328474829,3.28451198768419,5.24177532384304,4.54648332831962,6.37227377084316,0,0,0.12786256184353,0,0.50133791063589,0.144846518960824,0,0.486634870302636,0.189069634328136,0.443458794925128,0.175669571386252,0.654895377488563,0,0,0,0,0,0.476981248610684,0,1.11437250398869,0.198762407366705,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0.625098097988558,0.898117490504679,0.337834441449967,0,0.949265659568129,0.549605231791222,0,0,0,0,0.25326102332916,0.397227542439656,0.286836620748814,0.354668382198357,0,1.06748995729705,0.49333509683432,0.622422070799533,0.134710672069688,0.490385709340376,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.280901613404497,0.408308342509787,0.122834317311768,0.103325781175765,3.56400857184616,0.741800787835671,0,0,0.168336113954066,0.250237039743928,0.277064115484183,0.877955241761676,2.14541457059314,0.300476117813194,0,1.79389635688862,0.213557388818567,0.211931901159562,0.600182192168805,0,0.257640540045629,0.744467425326359,0.337552664482532,0.389748020644795,0.252433774244115,0,0.323292113637624,1.06502877754984,0.302256294682921,0.67824236924195,0,0,0,0,0.132529768321485,0,0.207322110030741,0,0.36497735907583,1.56449532329816,0,0,0.464367928031979,0.721879481669586,0.236613600079688,0,0.241011029883482,0,0,0,0.269662616320329,0.196221465125346,0,0,0,0,0,1.26755034821831,0,0,1.32438929824395,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0.290633938513962,0.383382679165211,0.492663237895943,0.176096868026452,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0.300343057843917,0.285826432630578,0.112131084345361,0.43596006883328,0.07333828582095,0,0,0,0,3.12022310734098,0.257207374262142,2.83698264046557,1.0656887160644,0.142977993658148,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0.479249710983165,0,0,0.723906533337896,0.821905290201534,1.07436577943937,0.672510863961164,5.12279976525011,3.45004119775228,5.00537841491019,0.254094624222463,0,0,0.335032530668698,0.637938751653163,0,0,0.414415513436035,0.613457458595699,0,0.271265023699736,0.831883446123229,0,0.315404830067869,0.234282829985426,0.300946099727719,0,0,0.664225598535437,1.10621501125022,0.260650843404249,0,0,4.34212854858063,3.8828556147351,4.90946765895844,0,0,0.604780586659361,0,0.153461973288062,0,0.384417447767103,0,0.482561763430822,0,0.308419387605311,0.177561725313127,0.0821271560138091,0,0.232420756919918,0,0,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0,0,0.721287081534056,0.0915694648183434,0.330037999682352,0,0,0,0.096670718292122,0.154048617114644,0,0.413509717453592,0.322260734604821,0.435050081742686,0.0852266274161009,0.267096106940212,0.165284915360978,0,0.638063562472921,0.10115778085555,0,0,0.6970372701606,0,0,0,0,0.143124886741991,0.372158369359667,0.949138274156178,1.14378116354295,0,0,0,0,0,0.274537029736055,0.353437207037059,0.404364963146632,0,0,0,0,0,0.272999822815972,0.424216295861138,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0.422215270595328,0.329294892959902,0,0,0.192444225451024,0.670302275535787,1.08890984861323,0.376575203107117,0,0,0,0.229723400206959,2.02979043692868,3.0585488285695,1.13929437434833,2.62054953003568,3.29089818468955,3.24236655596359,1.08006287447623,0.79312517629427,0,0.962479855263359,0,0.185803175125719,0,0.924843963529383,0.956557636372934,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0.223676107892416,0,0,0.278406173895242,0,0,0,0,0,0.146508179271894,0.606802608747567,0,0,0,1.18785872333055,0,0,0.422008249231538,0.1113087050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| ||
|short_description=p8@KLF12 | |short_description=p8@KLF12 | ||
}} | }} |
Latest revision as of 23:10, 17 September 2015
Short description: | p8@KLF12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_KLF12_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 129bp_to_ENST00000377666, uc010aeq.2_5end |
EntrezGene: | KLF12 |
HGNC: | 6346 |
UniProt: | Q9Y4X4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.86e-24 | 18 |
alpha-beta T cell | 1.86e-24 | 18 |
immature T cell | 1.86e-24 | 18 |
mature T cell | 1.86e-24 | 18 |
immature alpha-beta T cell | 1.86e-24 | 18 |
lymphoid lineage restricted progenitor cell | 4.18e-20 | 52 |
lymphocyte | 1.42e-19 | 53 |
common lymphoid progenitor | 1.42e-19 | 53 |
T cell | 2.61e-16 | 25 |
pro-T cell | 2.61e-16 | 25 |
CD8-positive, alpha-beta T cell | 1.50e-14 | 11 |
CD4-positive, alpha-beta T cell | 1.12e-13 | 6 |
nongranular leukocyte | 9.83e-12 | 115 |
leukocyte | 2.01e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 2.37e-08 | 120 |
hematopoietic stem cell | 5.95e-08 | 168 |
hematopoietic cell | 1.22e-07 | 177 |
naive T cell | 1.29e-07 | 3 |
B cell | 1.70e-07 | 14 |
natural killer cell | 3.46e-07 | 3 |
pro-NK cell | 3.46e-07 | 3 |
single nucleate cell | 3.91e-07 | 3 |
mononuclear cell | 3.91e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.83e-16 | 15 |
haemolymphatic fluid | 1.83e-16 | 15 |
organism substance | 1.83e-16 | 15 |