FFCP PHASE1:Hg19::chr13:41635285..41635356,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1997 | |EntrezGene=1997 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3316 | |HGNC=3316 | ||
|TSSclassifier=strong | |||
|UniProt=P32519 | |UniProt=P32519 | ||
|association_with_transcript=-209bp_to_ENST00000379498_5end | |association_with_transcript=-209bp_to_ENST00000379498_5end | ||
|cluster_id=chr13:41635285..41635356,- | |||
|description=CAGE_peak_3_at_ELF1_5end | |description=CAGE_peak_3_at_ELF1_5end | ||
|id=chr13:41635285..41635356,- | |id=chr13:41635285..41635356,- | ||
|ontology_enrichment_celltype=CL:0000839!4.96e-10!70;CL:0002057!7.08e-10!42;CL:0000557!2.37e-09!71;CL:0000766!7.23e-09!76;CL:0002320!5.43e-08!365;CL:0000860!5.72e-08!45;CL:0000134!9.94e-08!358;CL:0002009!1.68e-07!65;CL:0002194!1.82e-07!63;CL:0000576!1.82e-07!63;CL:0000040!1.82e-07!63;CL:0000559!1.82e-07!63;CL:0000048!2.52e-07!430 | |ontology_enrichment_celltype=CL:0000839!4.96e-10!70;CL:0002057!7.08e-10!42;CL:0000557!2.37e-09!71;CL:0000766!7.23e-09!76;CL:0002320!5.43e-08!365;CL:0000860!5.72e-08!45;CL:0000134!9.94e-08!358;CL:0002009!1.68e-07!65;CL:0002194!1.82e-07!63;CL:0000576!1.82e-07!63;CL:0000040!1.82e-07!63;CL:0000559!1.82e-07!63;CL:0000048!2.52e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.51e-08;33!CL:0002057;3.51e-08;33!CL:0000576;4.30e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,1.35e-11,66;CL:0000557,8.06e-11,67;CL:0000766,2.62e-10,72;CL:0000860,6.26e-10,42;CL:0002057,6.26e-10,42;CL:0002320,7.83e-09,361;CL:0002009,8.12e-09,61;CL:0002194,8.30e-09,59;CL:0000576,8.30e-09,59;CL:0000040,8.30e-09,59;CL:0000559,8.30e-09,59;CL:0000473,1.21e-08,48;CL:0000234,1.21e-08,48;CL:0000134,1.48e-08,354;CL:0000048,2.99e-08,427;CL:0000723,1.97e-07,433;CL:0000763,8.04e-07,108;CL:0000049,8.04e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;3.54e-07;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.60e-16!115;UBERON:0002204!4.46e-10!167;UBERON:0002371!9.49e-09!80;UBERON:0002384!8.51e-08!375;UBERON:0002390!1.41e-07!102;UBERON:0003061!1.41e-07!102;UBERON:0001474!1.49e-07!86;UBERON:0004765!1.83e-07!101;UBERON:0001434!1.83e-07!101;UBERON:0002193!3.86e-07!112;UBERON:0002405!5.10e-07!115;UBERON:0000468!8.55e-07!659 | |ontology_enrichment_uberon=UBERON:0007023!1.60e-16!115;UBERON:0002204!4.46e-10!167;UBERON:0002371!9.49e-09!80;UBERON:0002384!8.51e-08!375;UBERON:0002390!1.41e-07!102;UBERON:0003061!1.41e-07!102;UBERON:0001474!1.49e-07!86;UBERON:0004765!1.83e-07!101;UBERON:0001434!1.83e-07!101;UBERON:0002193!3.86e-07!112;UBERON:0002405!5.10e-07!115;UBERON:0000468!8.55e-07!659 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.13e-16,114;UBERON:0000926,2.31e-12,315;UBERON:0004120,2.31e-12,315;UBERON:0006603,2.31e-12,315;UBERON:0002204,3.97e-11,167;UBERON:0002371,4.87e-10,76;UBERON:0002390,1.19e-08,98;UBERON:0003061,1.19e-08,98;UBERON:0002405,1.23e-08,93;UBERON:0002384,1.25e-08,371;UBERON:0001474,1.29e-08,82;UBERON:0001434,1.61e-08,100;UBERON:0002193,4.69e-08,108;UBERON:0004765,5.95e-08,90;UBERON:0003081,1.99e-07,203 | |||
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| ||
|short_description=p3@ELF1 | |short_description=p3@ELF1 | ||
}} | }} |
Latest revision as of 08:48, 17 September 2015
Short description: | p3@ELF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ELF1_5end |
Coexpression cluster: | NA |
Association with transcript: | -209bp_to_ENST00000379498_5end |
EntrezGene: | ELF1 |
HGNC: | 3316 |
UniProt: | P32519 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 1.35e-11 | 66 |
granulocyte monocyte progenitor cell | 8.06e-11 | 67 |
myeloid leukocyte | 2.62e-10 | 72 |
classical monocyte | 6.26e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.26e-10 | 42 |
connective tissue cell | 7.83e-09 | 361 |
macrophage dendritic cell progenitor | 8.12e-09 | 61 |
monopoietic cell | 8.30e-09 | 59 |
monocyte | 8.30e-09 | 59 |
monoblast | 8.30e-09 | 59 |
promonocyte | 8.30e-09 | 59 |
defensive cell | 1.21e-08 | 48 |
phagocyte | 1.21e-08 | 48 |
mesenchymal cell | 1.48e-08 | 354 |
multi fate stem cell | 2.99e-08 | 427 |
somatic stem cell | 1.97e-07 | 433 |
myeloid cell | 8.04e-07 | 108 |
common myeloid progenitor | 8.04e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.13e-16 | 114 |
mesoderm | 2.31e-12 | 315 |
mesoderm-derived structure | 2.31e-12 | 315 |
presumptive mesoderm | 2.31e-12 | 315 |
musculoskeletal system | 3.97e-11 | 167 |
bone marrow | 4.87e-10 | 76 |
hematopoietic system | 1.19e-08 | 98 |
blood island | 1.19e-08 | 98 |
immune system | 1.23e-08 | 93 |
connective tissue | 1.25e-08 | 371 |
bone element | 1.29e-08 | 82 |
skeletal system | 1.61e-08 | 100 |
hemolymphoid system | 4.69e-08 | 108 |
skeletal element | 5.95e-08 | 90 |
lateral plate mesoderm | 1.99e-07 | 203 |