FFCP PHASE1:Hg19::chr12:94730103..94730114,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51134 | |EntrezGene=51134 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17966 | |HGNC=17966 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-479bp_to_ENST00000546587_5end | |association_with_transcript=-479bp_to_ENST00000546587_5end | ||
|cluster_id=chr12:94730103..94730114,- | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_10_at_CCDC41_5end | |description=CAGE_peak_10_at_CCDC41_5end | ||
|id=chr12:94730103..94730114,- | |id=chr12:94730103..94730114,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;6.62e-41;1!UBERON:0010227;1.21e-40;1!UBERON:0005062;3.31e-40;4!UBERON:0007284;3.31e-40;4!UBERON:0004872;5.08e-07;7 | |||
|ontology_enrichment_disease=DOID:114!3.09e-07!2 | |ontology_enrichment_disease=DOID:114!3.09e-07!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003978!5.75e-17!3;UBERON:0009751!5.75e-17!3;UBERON:0000946!5.75e-17!3;UBERON:0002523!5.75e-17!3;UBERON:0005983!5.75e-17!3;UBERON:0002165!5.75e-17!3;UBERON:0002062!5.75e-17!3;UBERON:0007280!5.75e-17!3;UBERON:0007100!1.23e-15!27;UBERON:0002079!1.82e-13!1;UBERON:0002135!2.06e-13!1;UBERON:0002146!2.62e-13!1;UBERON:0005623!2.62e-13!1;UBERON:0000948!2.81e-08!24;UBERON:0005498!2.81e-08!24;UBERON:0004140!2.81e-08!24;UBERON:0009881!2.81e-08!24;UBERON:0004141!2.81e-08!24;UBERON:0003084!2.81e-08!24;UBERON:0007005!2.81e-08!24;UBERON:0004139!2.81e-08!24;UBERON:0004291!2.81e-08!24;UBERON:0002081!2.28e-07!2;UBERON:0002133!2.43e-07!2 | |ontology_enrichment_uberon=UBERON:0003978!5.75e-17!3;UBERON:0009751!5.75e-17!3;UBERON:0000946!5.75e-17!3;UBERON:0002523!5.75e-17!3;UBERON:0005983!5.75e-17!3;UBERON:0002165!5.75e-17!3;UBERON:0002062!5.75e-17!3;UBERON:0007280!5.75e-17!3;UBERON:0007100!1.23e-15!27;UBERON:0002079!1.82e-13!1;UBERON:0002135!2.06e-13!1;UBERON:0002146!2.62e-13!1;UBERON:0005623!2.62e-13!1;UBERON:0000948!2.81e-08!24;UBERON:0005498!2.81e-08!24;UBERON:0004140!2.81e-08!24;UBERON:0009881!2.81e-08!24;UBERON:0004141!2.81e-08!24;UBERON:0003084!2.81e-08!24;UBERON:0007005!2.81e-08!24;UBERON:0004139!2.81e-08!24;UBERON:0004291!2.81e-08!24;UBERON:0002081!2.28e-07!2;UBERON:0002133!2.43e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0003978;3.75e-53;3!UBERON:0000946;3.75e-53;3!UBERON:0002079;1.21e-40;1!UBERON:0002135;1.21e-40;1!UBERON:0002146;2.70e-40;1!UBERON:0005623;2.70e-40;1!UBERON:0000948;2.28e-29;22!UBERON:0007100;5.94e-26;25!UBERON:0002081;4.21e-21;2!UBERON:0002133;4.21e-21;2!UBERON:0010313;8.13e-17;10!UBERON:0004151;1.50e-14;3!UBERON:0003103;4.01e-09;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,4.89e-53,3;UBERON:0009751,4.89e-53,3;UBERON:0000946,4.89e-53,3;UBERON:0002523,4.89e-53,3;UBERON:0005983,4.89e-53,3;UBERON:0002165,4.89e-53,3;UBERON:0002062,4.89e-53,3;UBERON:0007280,4.89e-53,3;UBERON:0002079,9.91e-41,1;UBERON:0002135,1.48e-40,1;UBERON:0002146,3.30e-40,1;UBERON:0005623,3.30e-40,1;UBERON:0000948,5.55e-27,24;UBERON:0005498,5.55e-27,24;UBERON:0004140,5.55e-27,24;UBERON:0009881,5.55e-27,24;UBERON:0004141,5.55e-27,24;UBERON:0003084,5.55e-27,24;UBERON:0007005,5.55e-27,24;UBERON:0004139,5.55e-27,24;UBERON:0004291,5.55e-27,24;UBERON:0007100,4.41e-24,27;UBERON:0004797,1.80e-23,7;UBERON:0002081,3.81e-21,2;UBERON:0010227,3.81e-21,2;UBERON:0002133,4.66e-21,2;UBERON:0010313,8.81e-17,10;UBERON:0002342,8.81e-17,10;UBERON:0005062,8.81e-17,10;UBERON:0004151,1.40e-14,3;UBERON:0003103,5.22e-10,68;UBERON:0004872,2.59e-08,83 | |||
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|short_description=p10@CCDC41 | |short_description=p10@CCDC41 | ||
}} | }} |
Latest revision as of 01:25, 16 September 2015
Short description: | p10@CCDC41 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_CCDC41_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | -479bp_to_ENST00000546587_5end |
EntrezGene: | CCDC41 |
HGNC: | 17966 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
valve | 4.89e-53 | 3 |
cardiac mesenchyme | 4.89e-53 | 3 |
cardial valve | 4.89e-53 | 3 |
tunica intima | 4.89e-53 | 3 |
heart layer | 4.89e-53 | 3 |
endocardium | 4.89e-53 | 3 |
endocardial cushion | 4.89e-53 | 3 |
presumptive endocardium | 4.89e-53 | 3 |
left cardiac atrium | 9.91e-41 | 1 |
mitral valve | 1.48e-40 | 1 |
pulmonary valve | 3.30e-40 | 1 |
semi-lunar valve | 3.30e-40 | 1 |
heart | 5.55e-27 | 24 |
primitive heart tube | 5.55e-27 | 24 |
primary heart field | 5.55e-27 | 24 |
anterior lateral plate mesoderm | 5.55e-27 | 24 |
heart tube | 5.55e-27 | 24 |
heart primordium | 5.55e-27 | 24 |
cardiac mesoderm | 5.55e-27 | 24 |
cardiogenic plate | 5.55e-27 | 24 |
heart rudiment | 5.55e-27 | 24 |
primary circulatory organ | 4.41e-24 | 27 |
blood vessel layer | 1.80e-23 | 7 |
cardiac atrium | 3.81e-21 | 2 |
future cardiac atrium | 3.81e-21 | 2 |
atrioventricular valve | 4.66e-21 | 2 |
neural crest-derived structure | 8.81e-17 | 10 |
neural crest | 8.81e-17 | 10 |
neural fold | 8.81e-17 | 10 |
cardiac chamber | 1.40e-14 | 3 |
compound organ | 5.22e-10 | 68 |
splanchnic layer of lateral plate mesoderm | 2.59e-08 | 83 |