FFCP PHASE1:Hg19::chr16:88220328..88220375,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:88220328..88220375,-
|short_description=p1@AK123554
|description=CAGE_peak_1_at_AK123554_5end
|association_with_transcript=0bp_to_AK123554_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AK123554_5end | |||
|cluster_id=chr16:88220328..88220375,- | |||
|description=CAGE_peak_1_at_AK123554_5end | |||
|id=chr16:88220328..88220375,- | |||
|ontology_enrichment_celltype=CL:0000055!3.76e-56!180;CL:0000183!5.11e-29!59;CL:0000187!7.05e-29!54;CL:0000057!7.70e-28!75;CL:0000192!8.13e-28!42;CL:0000514!8.13e-28!42;CL:0000680!3.04e-27!57;CL:0000056!3.04e-27!57;CL:0000355!3.04e-27!57;CL:0000393!7.86e-24!60;CL:0000211!7.86e-24!60;CL:0000359!2.25e-22!32;CL:0000048!8.62e-20!430;CL:0000723!1.12e-18!436;CL:0002371!6.58e-18!591;CL:0000034!2.93e-17!444;CL:0000144!1.52e-14!625;CL:0000222!1.10e-10!119;CL:0000548!3.95e-10!679;CL:0000004!3.95e-10!679;CL:0000255!3.95e-10!679;CL:0000012!9.22e-10!682;CL:0002539!2.04e-09!10;CL:0002334!1.09e-07!12;CL:0002620!1.92e-07!23;CL:0002320!2.27e-07!365;CL:0000499!3.57e-07!27;CL:0000327!3.84e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.98e-23;32!CL:0000192;2.00e-21;43!CL:0002539;1.62e-13;10!CL:0000187;1.76e-12;55!CL:0000393;2.70e-11;61!CL:0000211;2.70e-11;61!CL:0000499;2.34e-10;28!CL:0000327;6.33e-10;15!CL:0000057;1.05e-08;73!CL:0002334;6.51e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,2.08e-29,43;CL:0000514,2.08e-29,43;CL:0000187,1.26e-24,55;CL:0000359,1.05e-23,32;CL:0000057,8.44e-23,76;CL:0000680,1.10e-22,58;CL:0000056,1.10e-22,58;CL:0000355,1.10e-22,58;CL:0000393,6.01e-21,61;CL:0000211,6.01e-21,61;CL:0000048,8.40e-20,427;CL:0000723,4.97e-19,433;CL:0000034,4.89e-18,441;CL:0002539,1.66e-13,10;CL:0000499,2.15e-10,28;CL:0000222,7.53e-10,121;CL:0000327,7.96e-10,15;CL:0002334,4.69e-08,12;CL:0002320,5.36e-08,361;CL:0000219,6.64e-07,386;CL:0000134,7.96e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000514;2.00e-21;43!CL:0000355;1.13e-11;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.73e-27!83;UBERON:0002329!2.73e-27!83;UBERON:0003077!2.73e-27!83;UBERON:0003059!2.73e-27!83;UBERON:0007282!2.73e-27!83;UBERON:0009618!2.73e-27!83;UBERON:0007285!2.73e-27!83;UBERON:0001134!2.97e-26!61;UBERON:0002036!2.97e-26!61;UBERON:0003082!2.97e-26!61;UBERON:0002385!1.63e-25!63;UBERON:0001015!1.63e-25!63;UBERON:0000383!1.63e-25!63;UBERON:0004290!1.68e-24!70;UBERON:0000486!3.75e-20!82;UBERON:0001637!3.87e-17!42;UBERON:0003509!3.87e-17!42;UBERON:0004572!3.87e-17!42;UBERON:0005256!8.54e-17!143;UBERON:0004573!1.79e-16!33;UBERON:0004571!1.79e-16!33;UBERON:0002049!1.17e-15!79;UBERON:0007798!1.17e-15!79;UBERON:0004535!1.82e-14!110;UBERON:0004872!5.09e-14!84;UBERON:0001009!1.73e-13!113;UBERON:0000490!7.59e-13!138;UBERON:0001981!3.71e-12!60;UBERON:0007500!3.71e-12!60;UBERON:0004537!3.71e-12!60;UBERON:0006965!3.71e-12!60;UBERON:0000475!1.82e-11!365;UBERON:0000055!7.20e-11!69;UBERON:0001135!9.83e-10!15;UBERON:0003914!1.20e-09!118;UBERON:0002204!1.34e-09!167;UBERON:0004237!2.04e-09!10;UBERON:0004695!2.04e-09!10;UBERON:0002111!2.04e-09!10;UBERON:0004178!2.04e-09!10;UBERON:0002100!2.42e-09!216;UBERON:0000947!3.13e-08!21;UBERON:0010191!3.13e-08!21;UBERON:0003102!1.38e-07!95;UBERON:0002384!1.92e-07!375;UBERON:0000481!9.63e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.40e-19;33!UBERON:0004571;5.40e-19;33!UBERON:0001637;1.70e-14;42!UBERON:0003509;1.70e-14;42!UBERON:0004572;1.70e-14;42!UBERON:0004237;1.62e-13;10!UBERON:0004695;1.62e-13;10!UBERON:0002111;1.62e-13;10!UBERON:0004178;1.62e-13;10!UBERON:0001135;2.48e-13;15!UBERON:0000947;1.88e-10;21!UBERON:0010191;1.88e-10;21!UBERON:0007500;7.18e-08;56!UBERON:0001981;7.18e-08;56!UBERON:0004537;7.18e-08;56!UBERON:0002385;5.58e-07;31!UBERON:0001015;5.58e-07;31!UBERON:0000383;5.58e-07;31!UBERON:0002384;6.63e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,9.31e-22,62;UBERON:0002036,9.31e-22,62;UBERON:0003082,9.31e-22,62;UBERON:0004573,3.27e-21,33;UBERON:0004571,3.27e-21,33;UBERON:0001637,7.36e-21,42;UBERON:0003509,7.36e-21,42;UBERON:0004572,7.36e-21,42;UBERON:0002385,1.13e-20,64;UBERON:0001015,1.13e-20,64;UBERON:0000383,1.13e-20,64;UBERON:0007524,1.05e-18,73;UBERON:0002329,1.98e-18,71;UBERON:0003059,1.98e-18,71;UBERON:0007282,1.98e-18,71;UBERON:0004290,1.98e-18,71;UBERON:0009618,1.98e-18,71;UBERON:0003077,5.37e-18,72;UBERON:0007285,5.37e-18,72;UBERON:0007503,1.16e-16,78;UBERON:0000486,1.12e-15,83;UBERON:0002049,1.20e-14,78;UBERON:0007798,1.20e-14,78;UBERON:0004237,1.66e-13,10;UBERON:0004695,1.66e-13,10;UBERON:0002111,1.66e-13,10;UBERON:0004178,1.66e-13,10;UBERON:0007500,3.08e-13,59;UBERON:0001981,3.08e-13,59;UBERON:0004537,3.08e-13,59;UBERON:0006965,3.08e-13,59;UBERON:0001135,3.17e-13,15;UBERON:0005256,2.93e-12,122;UBERON:0004535,2.21e-11,109;UBERON:0000055,2.65e-11,68;UBERON:0004872,2.78e-11,83;UBERON:0003104,3.97e-11,160;UBERON:0009142,3.97e-11,160;UBERON:0001009,9.60e-11,112;UBERON:0000947,1.99e-10,21;UBERON:0010191,1.99e-10,21;UBERON:0000490,5.92e-09,148;UBERON:0002204,2.80e-08,167;UBERON:0003914,3.29e-08,117;UBERON:0002384,1.31e-07,371 | |||
|phase1_expression=0,0.428201047781966,0.563817616383885,1.0007329835313,0,2.61701557230111,2.53299878168311,0,0.261185628199839,0.491467873003018,0,0.218441372130172,0.527533956456907,1.73272894144065,1.32558950291166,4.70627602516243,3.61616716814386,4.38186054232424,5.85519358548608,3.20114750999649,2.65200898617529,2.19418305034661,0.572471974262113,0.547497700291537,0.376627918784408,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755751887377619,0.242584061187816,0,0.411167888021826,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0.209658645508376,0,0,0.16072558669708,0,0.59675003159727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0,0,0,0,2.01210257911091,0.895037932904712,4.69870898099936,14.5387994084408,3.91085601194224,0.795285947051099,1.45990461090791,0.189069634328136,0.886917589850256,0.527008714158756,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0,0,0,0,0,0.183201743930407,0,0,0,0.993943903390637,2.65924074495618,9.40105183773854,4.01571269048339,2.12801029319014,0,1.06748995729705,4.44001587150888,0.622422070799533,1.61652806483626,0.163461903113459,1.21085942115945,1.72852777344,1.40592859100278,0.312160076830321,0.570471821544449,0.149448680551801,0,0,0.140450806702248,1.22492502752936,0.982674538494144,2.58314452939414,9.50402285825643,14.8360157567134,0.910161361938026,6.46756327634615,0.336672227908132,0.250237039743928,0.277064115484183,7.02364193409341,8.27517048657353,11.4180924769014,1.24775401476023,0.538168907066586,1.92201649936711,1.05965950579781,0.900273288253207,1.33968288009971,1.8034837803194,1.48893485065272,0.843881661206331,0.389748020644795,0.757301322732344,1.56484827691909,1.13152239773168,1.06502877754984,0.201504196455281,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,4.20725321410337,2.057870056657,1.47008711385542,0,0,0,0,0,3.77449182656756,0,0,0,0,3.25808305310325,2.07986957055916,2.88662684050547,0.231860809950154,4.69634776943287,0.288732895522148,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.37311228946907,4.79556075716608,5.867062865676,2.19761916788222,0,2.535908257668,1.06375246633948,0,0,0,1.0656887160644,1.71573592389777,0,1.64648067356154,3.25736184293735,1.77695974371273,0,0,0,0,0,0,0,50.0815947977408,36.7558194669164,0,0.289562613335158,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0.981531933753119,1.00034104211935,1.35632511849868,7.27898015357825,3.7470087647404,1.73472656537328,0,0.300946099727719,0,2.0694614258501,2.65690239414175,3.13427586520895,0.347534457872331,0.195801157462741,1.71571711905428,0.206768026122887,0,0.106727557803444,0.303127571446259,0,0.30239029332968,0.744323423456331,0.460385919864187,1.12264037773229,1.79394808957981,3.07024349440022,1.76939313257968,1.48418066444991,1.69630663182921,3.72879623157567,1.06765302817952,10.3850885836724,1.74315567689939,0,0,0,3.67406234126742,6.00900854422166,3.67148361886388,0,0,0,0,0.105551628892876,0,0,1.94324324491925,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0.512900250232778,0,0.325378394664303,0,0,0,0.574265537996172,0,0,1.64340221096607,0.154048617114644,0.460511024178389,0.413509717453592,0.214840489736547,0.870100163485371,0.255679882248303,2.49289699810865,0,0,0,0,4.18360994367557,4.09256050879832,4.8792608911242,5.23657086299351,3.19383618190213,4.34966496037536,10.0075078316117,14.1693637874571,1.116475108079,2.53103539774981,0.571890581771475,0.767693373934002,0.855877976067841,6.36406495851874,10.20433232259,1.2591072030832,2.19629623788844,2.12062324222236,3.43710218674637,3.17020642346017,1.26377536871694,2.92580243453754,2.68084838594413,3.16950440270266,1.77449884830381,5.5148118461948,12.4308928282267,14.3354989321992,5.97095077717098,0.876901770507525,1.73632660280006,1.31178950409327,0.405820753925408,2.16876448669825,3.09865162785466,0.430234056612155,0.491245205065606,0.7133421029625,1.06428319221179,1.05553817648832,1.64647446479951,1.89736586882858,6.29882496440969,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0.102268682502155,0,6.84287092855976,0.179736702294654,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0.455768223388005,0,0,0,0,1.19076871422421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,1.22206028986725,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.451961481561065,4.65942543798953,0.397429223405979,0,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,0,0.313808538937,2.14196257036276,4.04530825862126,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0.899895566206002,1.5476039091159,0,0,0,0,2.32320740342694,0,0,0,0,0,0,0,0,0,0,0.170388021785422,3.5126748371239,0,0,0,0,0,0,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| ||
|short_description=p1@AK123554 | |||
}} | }} |
Latest revision as of 13:18, 25 July 2015
Short description: | p1@AK123554 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AK123554_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AK123554_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 2.08e-29 | 43 |
smooth muscle myoblast | 2.08e-29 | 43 |
muscle cell | 1.26e-24 | 55 |
vascular associated smooth muscle cell | 1.05e-23 | 32 |
fibroblast | 8.44e-23 | 76 |
muscle precursor cell | 1.10e-22 | 58 |
myoblast | 1.10e-22 | 58 |
multi-potent skeletal muscle stem cell | 1.10e-22 | 58 |
electrically responsive cell | 6.01e-21 | 61 |
electrically active cell | 6.01e-21 | 61 |
multi fate stem cell | 8.40e-20 | 427 |
somatic stem cell | 4.97e-19 | 433 |
stem cell | 4.89e-18 | 441 |
aortic smooth muscle cell | 1.66e-13 | 10 |
stromal cell | 2.15e-10 | 28 |
mesodermal cell | 7.53e-10 | 121 |
extracellular matrix secreting cell | 7.96e-10 | 15 |
preadipocyte | 4.69e-08 | 12 |
connective tissue cell | 5.36e-08 | 361 |
motile cell | 6.64e-07 | 386 |
mesenchymal cell | 7.96e-07 | 354 |