FFCP PHASE1:Hg19::chr16:87887280..87887293,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:87887280..87887293,-
|short_description=p@chr16:87887280..87887293,-
|description=CAGE_peak_at_chr16:87887280..87887293,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:87887280..87887293,- | |||
|coexpression_cluster_id=C19 | |||
|description=CAGE_peak_at_chr16:87887280..87887293,- | |||
|id=chr16:87887280..87887293,- | |||
|ontology_enrichment_celltype=CL:0000860!1.44e-12!45;CL:0002057!1.78e-11!42;CL:0000766!1.51e-09!76;CL:0000548!3.60e-07!679;CL:0000004!3.60e-07!679;CL:0000255!3.60e-07!679;CL:0000839!3.81e-07!70;CL:0002194!6.09e-07!63;CL:0000576!6.09e-07!63;CL:0000040!6.09e-07!63;CL:0000559!6.09e-07!63;CL:0000012!6.36e-07!682;CL:0000219!6.62e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.29e-39;33!CL:0002057;2.29e-39;33!CL:0000473;1.08e-25;39!CL:0000234;1.08e-25;39!CL:0000576;1.19e-17;48!CL:0000766;1.33e-12;69!CL:0002567;6.41e-10;3!CL:0000081;8.28e-10;11!CL:0000763;2.68e-09;100!CL:0000094;5.21e-08;8!CL:0002550;7.09e-08;1!CL:0002566;7.09e-08;1!CL:0002087;2.87e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.50e-33,42;CL:0002057,1.50e-33,42;CL:0000473,5.51e-29,48;CL:0000234,5.51e-29,48;CL:0000766,1.85e-26,72;CL:0002194,1.36e-22,59;CL:0000576,1.36e-22,59;CL:0000040,1.36e-22,59;CL:0000559,1.36e-22,59;CL:0002009,9.08e-22,61;CL:0000839,6.39e-20,66;CL:0000557,1.39e-19,67;CL:0000763,1.56e-16,108;CL:0000049,1.56e-16,108;CL:0000738,2.04e-12,136;CL:0000988,3.43e-11,177;CL:0002087,2.99e-10,115;CL:0002567,4.79e-10,3;CL:0002032,6.00e-10,161;CL:0000837,6.00e-10,161;CL:0000081,9.43e-10,11;CL:0002031,1.05e-09,120;CL:0000037,2.18e-09,168;CL:0000094,6.11e-08,8;CL:0002566,7.10e-08,1;CL:0002550,9.94e-08,1 | |||
|ontology_enrichment_development_v019=CL:0002057;7.58e-23;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.03e-17,76;UBERON:0002390,2.26e-16,98;UBERON:0003061,2.26e-16,98;UBERON:0001474,1.66e-15,82;UBERON:0002193,1.47e-14,108;UBERON:0004765,7.01e-14,90;UBERON:0002405,2.42e-13,93;UBERON:0001434,3.27e-12,100;UBERON:0003081,3.76e-07,203 | |||
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| ||
|short_description=p@chr16:87887280..87887293,- | |||
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Latest revision as of 13:14, 25 July 2015
Short description: | p@chr16:87887280..87887293, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:87887280..87887293, - |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.50e-33 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.50e-33 | 42 |
defensive cell | 5.51e-29 | 48 |
phagocyte | 5.51e-29 | 48 |
myeloid leukocyte | 1.85e-26 | 72 |
monopoietic cell | 1.36e-22 | 59 |
monocyte | 1.36e-22 | 59 |
monoblast | 1.36e-22 | 59 |
promonocyte | 1.36e-22 | 59 |
macrophage dendritic cell progenitor | 9.08e-22 | 61 |
myeloid lineage restricted progenitor cell | 6.39e-20 | 66 |
granulocyte monocyte progenitor cell | 1.39e-19 | 67 |
myeloid cell | 1.56e-16 | 108 |
common myeloid progenitor | 1.56e-16 | 108 |
leukocyte | 2.04e-12 | 136 |
hematopoietic cell | 3.43e-11 | 177 |
nongranular leukocyte | 2.99e-10 | 115 |
light melanocyte | 4.79e-10 | 3 |
hematopoietic oligopotent progenitor cell | 6.00e-10 | 161 |
hematopoietic multipotent progenitor cell | 6.00e-10 | 161 |
blood cell | 9.43e-10 | 11 |
hematopoietic lineage restricted progenitor cell | 1.05e-09 | 120 |
hematopoietic stem cell | 2.18e-09 | 168 |
granulocyte | 6.11e-08 | 8 |
dark melanocyte | 7.10e-08 | 1 |
fibroblast of the conjuctiva | 9.94e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.03e-17 | 76 |
hematopoietic system | 2.26e-16 | 98 |
blood island | 2.26e-16 | 98 |
bone element | 1.66e-15 | 82 |
hemolymphoid system | 1.47e-14 | 108 |
skeletal element | 7.01e-14 | 90 |
immune system | 2.42e-13 | 93 |
skeletal system | 3.27e-12 | 100 |
lateral plate mesoderm | 3.76e-07 | 203 |