FFCP PHASE1:Hg19::chr8:9577986..9578004,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8658 | |EntrezGene=8658 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11941 | |HGNC=11941 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=20bp_to_ENST00000519930_5end | |association_with_transcript=20bp_to_ENST00000519930_5end | ||
|cluster_id=chr8:9577986..9578004,+ | |||
|coexpression_cluster_id=C138 | |||
|description=CAGE_peak_12_at_TNKS_5end | |description=CAGE_peak_12_at_TNKS_5end | ||
|id=chr8:9577986..9578004,+ | |id=chr8:9577986..9578004,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.16e-34;24!CL:0000785;2.58e-34;1!CL:0000819;2.58e-34;1!CL:0000542;5.41e-12;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.05e-34,24;CL:0000826,1.05e-34,24;CL:0000819,2.58e-34,1;CL:0000785,6.48e-18,2;CL:0000955,6.48e-18,2;CL:0000818,6.48e-18,2;CL:0000954,6.48e-18,2;CL:0000816,6.48e-18,2;CL:0000838,2.36e-16,52;CL:0000542,4.70e-16,53;CL:0000051,4.70e-16,53;CL:0000817,2.07e-12,3;CL:0002087,1.44e-07,115;CL:0002031,2.87e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000954;6.48e-18;2!CL:0000051;5.41e-12;53 | |||
|ontology_enrichment_disease=DOID:0060058!3.95e-08!10 | |ontology_enrichment_disease=DOID:0060058!3.95e-08!10 | ||
|ontology_enrichment_disease_v019=DOID:0060073;2.58e-34;1!DOID:8675;2.58e-34;1!DOID:0060058;2.49e-14;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,2.58e-34,1;DOID:8675,2.58e-34,1;DOID:0060058,2.49e-14,10 | |||
|ontology_enrichment_uberon=UBERON:0002106!2.25e-09!3;UBERON:0004854!2.25e-09!3;UBERON:0009034!2.25e-09!3;UBERON:0002095!2.25e-09!3;UBERON:0004782!2.25e-09!3;UBERON:0003281!2.25e-09!3;UBERON:0009664!2.25e-09!3;UBERON:0002296!2.25e-09!3;UBERON:0005602!2.25e-09!3;UBERON:0001179!2.25e-09!3;UBERON:0006293!2.25e-09!3;UBERON:0002148!6.39e-07!2;UBERON:0009662!6.39e-07!2;UBERON:0004177!9.16e-07!7 | |ontology_enrichment_uberon=UBERON:0002106!2.25e-09!3;UBERON:0004854!2.25e-09!3;UBERON:0009034!2.25e-09!3;UBERON:0002095!2.25e-09!3;UBERON:0004782!2.25e-09!3;UBERON:0003281!2.25e-09!3;UBERON:0009664!2.25e-09!3;UBERON:0002296!2.25e-09!3;UBERON:0005602!2.25e-09!3;UBERON:0001179!2.25e-09!3;UBERON:0006293!2.25e-09!3;UBERON:0002148!6.39e-07!2;UBERON:0009662!6.39e-07!2;UBERON:0004177!9.16e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002372;5.97e-34;1!UBERON:0001961;5.97e-34;1!UBERON:0001744;5.97e-34;1!UBERON:0001042;5.97e-34;1!UBERON:0001735;5.97e-34;1!UBERON:0006562;9.86e-18;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,9.85e-34,1;UBERON:0001961,9.85e-34,1;UBERON:0001744,9.85e-34,1;UBERON:0001735,9.85e-34,1 | |||
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| ||
|short_description=p12@TNKS | |short_description=p12@TNKS | ||
}} | }} |
Latest revision as of 13:22, 19 September 2015
Short description: | p12@TNKS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_TNKS_5end |
Coexpression cluster: | C138_diffuse_Burkitt_lymphangiectasia_lymphoma_acute_CD19_pineal |
Association with transcript: | 20bp_to_ENST00000519930_5end |
EntrezGene: | TNKS |
HGNC: | 11941 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.05e-34 | 24 |
pro-B cell | 1.05e-34 | 24 |
B-1 B cell | 2.58e-34 | 1 |
mature B cell | 6.48e-18 | 2 |
pre-B-II cell | 6.48e-18 | 2 |
transitional stage B cell | 6.48e-18 | 2 |
small pre-B-II cell | 6.48e-18 | 2 |
immature B cell | 6.48e-18 | 2 |
lymphoid lineage restricted progenitor cell | 2.36e-16 | 52 |
lymphocyte | 4.70e-16 | 53 |
common lymphoid progenitor | 4.70e-16 | 53 |
precursor B cell | 2.07e-12 | 3 |
nongranular leukocyte | 1.44e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 2.87e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
tonsil | 9.85e-34 | 1 |
mucosa-associated lymphoid tissue | 9.85e-34 | 1 |
lymphoid tissue | 9.85e-34 | 1 |
tonsillar ring | 9.85e-34 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 2.58e-34 | 1 |
lymphosarcoma | 2.58e-34 | 1 |
lymphoma | 2.49e-14 | 10 |