FFCP PHASE1:Hg19::chr12:113494494..113494505,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1840 | |EntrezGene=1840 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3060 | |HGNC=3060 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-8bp_to_ENST00000548759_5end | |association_with_transcript=-8bp_to_ENST00000548759_5end | ||
|cluster_id=chr12:113494494..113494505,+ | |||
|coexpression_cluster_id=C138 | |||
|description=CAGE_peak_4_at_DTX1_5end | |description=CAGE_peak_4_at_DTX1_5end | ||
|id=chr12:113494494..113494505,+ | |id=chr12:113494494..113494505,+ | ||
|ontology_enrichment_celltype=CL:0000542!3.18e-18!53;CL:0000051!3.18e-18!53;CL:0000838!3.33e-17!52;CL:0000945!1.59e-16!24;CL:0000826!1.59e-16!24;CL:0000236!3.73e-13!14 | |ontology_enrichment_celltype=CL:0000542!3.18e-18!53;CL:0000051!3.18e-18!53;CL:0000838!3.33e-17!52;CL:0000945!1.59e-16!24;CL:0000826!1.59e-16!24;CL:0000236!3.73e-13!14 | ||
|ontology_enrichment_celltype_v019=CL:0000945;7.13e-27;24!CL:0000542;4.88e-11;53!CL:0000785;2.09e-07;1!CL:0000819;2.09e-07;1!CL:0000236;2.30e-07;13!CL:0000817;2.73e-07;1!CL:0000946;7.55e-07;1!CL:0000786;7.55e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.82e-27,24;CL:0000826,3.82e-27,24;CL:0000817,2.06e-18,3;CL:0000542,3.21e-18,53;CL:0000051,3.21e-18,53;CL:0000838,6.24e-16,52;CL:0000785,7.02e-13,2;CL:0000955,7.02e-13,2;CL:0000818,7.02e-13,2;CL:0000954,7.02e-13,2;CL:0000816,7.02e-13,2;CL:0000236,2.65e-10,14;CL:0000819,2.09e-07,1;CL:0000738,2.91e-07,136;CL:0000946,3.78e-07,1;CL:0000786,3.78e-07,1;CL:0000980,3.78e-07,1;CL:0002087,8.98e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000954;1.40e-12;2!CL:0000051;4.88e-11;53 | |||
|ontology_enrichment_disease=DOID:0060058!5.54e-07!10 | |ontology_enrichment_disease=DOID:0060058!5.54e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;5.27e-21;10!DOID:0060073;2.09e-07;1!DOID:8675;2.09e-07;1!DOID:12603;7.55e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,5.33e-21,10;DOID:2531,8.51e-08,51;DOID:0060083,8.51e-08,51;DOID:0060073,2.09e-07,1;DOID:8675,2.09e-07,1;DOID:12603,4.51e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000073!4.17e-25!94;UBERON:0001016!4.17e-25!94;UBERON:0001017!1.03e-24!82;UBERON:0005743!6.02e-24!86;UBERON:0000955!3.75e-22!69;UBERON:0006238!3.75e-22!69;UBERON:0007023!1.94e-20!115;UBERON:0001049!1.92e-19!57;UBERON:0005068!1.92e-19!57;UBERON:0006241!1.92e-19!57;UBERON:0007135!1.92e-19!57;UBERON:0001893!6.47e-19!34;UBERON:0001869!7.05e-19!32;UBERON:0002020!7.44e-19!34;UBERON:0003528!7.44e-19!34;UBERON:0002616!2.10e-18!59;UBERON:0002791!7.40e-18!33;UBERON:0002780!3.99e-17!41;UBERON:0001890!3.99e-17!41;UBERON:0006240!3.99e-17!41;UBERON:0003080!1.62e-16!42;UBERON:0000956!2.04e-15!25;UBERON:0000203!2.04e-15!25;UBERON:0002619!4.96e-15!22;UBERON:0001950!6.36e-15!20;UBERON:0003075!5.36e-14!86;UBERON:0007284!5.36e-14!86;UBERON:0002346!7.63e-13!90;UBERON:0003056!1.18e-10!61;UBERON:0004121!1.56e-10!169;UBERON:0000153!2.68e-10!129;UBERON:0007811!2.68e-10!129;UBERON:0000924!6.16e-10!173;UBERON:0006601!6.16e-10!173;UBERON:0000033!1.48e-09!123 | |ontology_enrichment_uberon=UBERON:0000073!4.17e-25!94;UBERON:0001016!4.17e-25!94;UBERON:0001017!1.03e-24!82;UBERON:0005743!6.02e-24!86;UBERON:0000955!3.75e-22!69;UBERON:0006238!3.75e-22!69;UBERON:0007023!1.94e-20!115;UBERON:0001049!1.92e-19!57;UBERON:0005068!1.92e-19!57;UBERON:0006241!1.92e-19!57;UBERON:0007135!1.92e-19!57;UBERON:0001893!6.47e-19!34;UBERON:0001869!7.05e-19!32;UBERON:0002020!7.44e-19!34;UBERON:0003528!7.44e-19!34;UBERON:0002616!2.10e-18!59;UBERON:0002791!7.40e-18!33;UBERON:0002780!3.99e-17!41;UBERON:0001890!3.99e-17!41;UBERON:0006240!3.99e-17!41;UBERON:0003080!1.62e-16!42;UBERON:0000956!2.04e-15!25;UBERON:0000203!2.04e-15!25;UBERON:0002619!4.96e-15!22;UBERON:0001950!6.36e-15!20;UBERON:0003075!5.36e-14!86;UBERON:0007284!5.36e-14!86;UBERON:0002346!7.63e-13!90;UBERON:0003056!1.18e-10!61;UBERON:0004121!1.56e-10!169;UBERON:0000153!2.68e-10!129;UBERON:0007811!2.68e-10!129;UBERON:0000924!6.16e-10!173;UBERON:0006601!6.16e-10!173;UBERON:0000033!1.48e-09!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.35e-08;3!UBERON:0002791;2.30e-07;32!UBERON:0001869;5.97e-07;32!UBERON:0001882;7.55e-07;1!UBERON:0002372;7.55e-07;1!UBERON:0001874;7.55e-07;1!UBERON:0001961;7.55e-07;1!UBERON:0001744;7.55e-07;1!UBERON:0001042;7.55e-07;1!UBERON:0005403;7.55e-07;1!UBERON:0001735;7.55e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.73e-08,3;UBERON:0004854,1.73e-08,3;UBERON:0009034,1.73e-08,3;UBERON:0002095,1.73e-08,3;UBERON:0004782,1.73e-08,3;UBERON:0003281,1.73e-08,3;UBERON:0009664,1.73e-08,3;UBERON:0002296,1.73e-08,3;UBERON:0005602,1.73e-08,3;UBERON:0001179,1.73e-08,3;UBERON:0006293,1.73e-08,3;UBERON:0002791,3.29e-07,32;UBERON:0001869,3.29e-07,32;UBERON:0001874,6.76e-07,1;UBERON:0002372,8.98e-07,1;UBERON:0001961,8.98e-07,1;UBERON:0001744,8.98e-07,1;UBERON:0001735,8.98e-07,1;UBERON:0003528,9.48e-07,34;UBERON:0002020,9.48e-07,34;UBERON:0001893,9.48e-07,34 | |||
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| ||
|short_description=p4@DTX1 | |short_description=p4@DTX1 | ||
}} | }} |
Latest revision as of 11:57, 16 September 2015
Short description: | p4@DTX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_DTX1_5end |
Coexpression cluster: | C138_diffuse_Burkitt_lymphangiectasia_lymphoma_acute_CD19_pineal |
Association with transcript: | -8bp_to_ENST00000548759_5end |
EntrezGene: | DTX1 |
HGNC: | 3060 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.82e-27 | 24 |
pro-B cell | 3.82e-27 | 24 |
precursor B cell | 2.06e-18 | 3 |
lymphocyte | 3.21e-18 | 53 |
common lymphoid progenitor | 3.21e-18 | 53 |
lymphoid lineage restricted progenitor cell | 6.24e-16 | 52 |
mature B cell | 7.02e-13 | 2 |
pre-B-II cell | 7.02e-13 | 2 |
transitional stage B cell | 7.02e-13 | 2 |
small pre-B-II cell | 7.02e-13 | 2 |
immature B cell | 7.02e-13 | 2 |
B cell | 2.65e-10 | 14 |
B-1 B cell | 2.09e-07 | 1 |
leukocyte | 2.91e-07 | 136 |
antibody secreting cell | 3.78e-07 | 1 |
plasma cell | 3.78e-07 | 1 |
plasmablast | 3.78e-07 | 1 |
nongranular leukocyte | 8.98e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.73e-08 | 3 |
gastrointestinal system mesentery | 1.73e-08 | 3 |
stomach region | 1.73e-08 | 3 |
mesentery | 1.73e-08 | 3 |
gastrointestinal system serosa | 1.73e-08 | 3 |
mesentery of stomach | 1.73e-08 | 3 |
gut mesentery | 1.73e-08 | 3 |
dorsal mesentery | 1.73e-08 | 3 |
dorsal mesogastrium | 1.73e-08 | 3 |
peritoneal cavity | 1.73e-08 | 3 |
spleen primordium | 1.73e-08 | 3 |
regional part of telencephalon | 3.29e-07 | 32 |
cerebral hemisphere | 3.29e-07 | 32 |
putamen | 6.76e-07 | 1 |
tonsil | 8.98e-07 | 1 |
mucosa-associated lymphoid tissue | 8.98e-07 | 1 |
lymphoid tissue | 8.98e-07 | 1 |
tonsillar ring | 8.98e-07 | 1 |
brain grey matter | 9.48e-07 | 34 |
gray matter | 9.48e-07 | 34 |
telencephalon | 9.48e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 5.33e-21 | 10 |
hematologic cancer | 8.51e-08 | 51 |
immune system cancer | 8.51e-08 | 51 |
lymphatic system cancer | 2.09e-07 | 1 |
lymphosarcoma | 2.09e-07 | 1 |
acute leukemia | 4.51e-07 | 1 |