FFCP PHASE1:Hg19::chr12:109251326..109251337,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54434 | |EntrezGene=54434 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30579 | |HGNC=30579 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WYL5 | |UniProt=Q8WYL5 | ||
|association_with_transcript=21bp_to_ENST00000360239,NM_001161330,NM_018984,uc001tnm.2,uc001tnn.3_5end | |association_with_transcript=21bp_to_ENST00000360239,NM_001161330,NM_018984,uc001tnm.2,uc001tnn.3_5end | ||
|cluster_id=chr12:109251326..109251337,- | |||
|description=CAGE_peak_3_at_SSH1_5end | |description=CAGE_peak_3_at_SSH1_5end | ||
|id=chr12:109251326..109251337,- | |id=chr12:109251326..109251337,- | ||
|ontology_enrichment_celltype=CL:0002371!2.11e-13!591;CL:0002057!7.25e-13!42;CL:0000860!4.45e-12!45;CL:0000144!5.84e-11!625;CL:0000359!7.75e-09!32;CL:0002009!3.26e-08!65;CL:0000055!3.63e-08!180;CL:0000548!8.72e-08!679;CL:0000004!8.72e-08!679;CL:0000255!8.72e-08!679;CL:0000012!1.19e-07!682;CL:0002194!1.48e-07!63;CL:0000576!1.48e-07!63;CL:0000040!1.48e-07!63;CL:0000559!1.48e-07!63;CL:0000048!1.49e-07!430;CL:0000723!2.38e-07!436;CL:0000557!4.30e-07!71 | |ontology_enrichment_celltype=CL:0002371!2.11e-13!591;CL:0002057!7.25e-13!42;CL:0000860!4.45e-12!45;CL:0000144!5.84e-11!625;CL:0000359!7.75e-09!32;CL:0002009!3.26e-08!65;CL:0000055!3.63e-08!180;CL:0000548!8.72e-08!679;CL:0000004!8.72e-08!679;CL:0000255!8.72e-08!679;CL:0000012!1.19e-07!682;CL:0002194!1.48e-07!63;CL:0000576!1.48e-07!63;CL:0000040!1.48e-07!63;CL:0000559!1.48e-07!63;CL:0000048!1.49e-07!430;CL:0000723!2.38e-07!436;CL:0000557!4.30e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.17e-16;33!CL:0002057;2.17e-16;33!CL:0000473;1.71e-10;39!CL:0000234;1.71e-10;39!CL:0000576;9.08e-09;48!CL:0000359;2.66e-08;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.77e-17,42;CL:0002057,5.77e-17,42;CL:0000473,7.74e-14,48;CL:0000234,7.74e-14,48;CL:0002009,4.25e-10,61;CL:0002194,1.46e-09,59;CL:0000576,1.46e-09,59;CL:0000040,1.46e-09,59;CL:0000559,1.46e-09,59;CL:0000557,2.88e-09,67;CL:0000766,8.81e-09,72;CL:0000048,1.30e-08,427;CL:0000839,1.62e-08,66;CL:0000359,3.09e-08,32;CL:0000723,3.63e-08,433;CL:0000034,5.79e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.89e-12;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!2.04e-11!167;UBERON:0003081!6.82e-07!216;UBERON:0000914!8.97e-07!83;UBERON:0002329!8.97e-07!83;UBERON:0003077!8.97e-07!83;UBERON:0003059!8.97e-07!83;UBERON:0007282!8.97e-07!83;UBERON:0009618!8.97e-07!83;UBERON:0007285!8.97e-07!83 | |ontology_enrichment_uberon=UBERON:0002204!2.04e-11!167;UBERON:0003081!6.82e-07!216;UBERON:0000914!8.97e-07!83;UBERON:0002329!8.97e-07!83;UBERON:0003077!8.97e-07!83;UBERON:0003059!8.97e-07!83;UBERON:0007282!8.97e-07!83;UBERON:0009618!8.97e-07!83;UBERON:0007285!8.97e-07!83 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.75e-11,167;UBERON:0003081,1.58e-10,203;UBERON:0002371,8.12e-09,76;UBERON:0001474,2.19e-08,82;UBERON:0000926,5.28e-08,315;UBERON:0004120,5.28e-08,315;UBERON:0006603,5.28e-08,315;UBERON:0001637,4.19e-07,42;UBERON:0003509,4.19e-07,42;UBERON:0004572,4.19e-07,42;UBERON:0004765,5.86e-07,90;UBERON:0001434,9.52e-07,100 | |||
|phase1_expression=1.09007027562334,0.856402095563933,1.69145284915165,1.0007329835313,0.446961094427288,0.872338524100369,2.53299878168311,0,0.261185628199839,0.737201809504527,1.39560233594486,1.31064823278103,1.05506791291381,0.37129905888014,0.662794751455832,1.34465029290355,1.20538905604795,1.46062018077475,0.975865597581014,0.61560529038394,0.612002073732759,0,0,0.410623275218653,0.376627918784408,0.0764134057479513,0.246301768349837,0.314843125254717,1.57345710739562,0,1.39334510984468,0.919421224478927,1.204823675113,0.739508020333575,0,0.142169232487422,0,3.32397245119126,3.00816671205213,2.17010870715852,0,0,0,0.726991193897824,2.26725566213286,1.69808842831471,0.697287110717054,3.70051099219643,1.54853185447552,0.863077176966451,4.61089271752381,1.41889337933151,4.13694816883942,3.87290810150296,1.35426486594342,1.88242339542605,2.72906150057846,1.57306439111559,1.22433556948361,6.41858054152187,3.19668562899521,0.989553900560148,4.9865914405408,1.27867425159808,0.580418477257168,1.13477044938228,0.622822248995575,1.7587406567972,4.17186334736161,1.52032191293582,0,3.68277635987565,0.949387162322653,0.845021145247767,0,0.838634582033504,0.44931452458598,0.150176892841506,0,0,0.39783335439818,0.365328307529268,1.75996244461323,0,0,0,0,0,0,0.954053754535364,0,0,0.764546456250458,0,1.12101712596307,0,0.196709770113833,0,0.205601498999509,0.167186495390678,0,0,0,0.222820913770347,0,0.221533894583621,0,0,0.390178042679635,0.328875809207352,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.534880391567015,0.289648807765598,2.43806866313962,0.670700859703636,1.02290049474824,0.722878304769133,1.00267582127178,0.289693037921647,0,0.486634870302636,0.567208902984407,1.33037638477538,0.966182642624386,0.0654895377488563,1.09288586487763,0.370784442784429,0,0.348259474598534,0.797747763113191,0.953962497221368,2.28797964312051,0.74291500265913,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,1.10298924103761,0,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0,0,0,0.872188104285069,1.98788780678127,2.27934920996244,4.76673050927588,1.43418310374407,0.709336764396714,1.68203280042692,0,0.24666754841716,0.933633106199299,0.269421344139376,0.980771418680752,1.05950199351452,0.576175924479999,0,0.624320153660641,0,0.448346041655403,0,0,0.421352420106746,1.02077085627447,0.737005903870608,0.723280468230358,1.18800285728205,0.494533858557114,0.910161361938026,0,0.168336113954066,0.250237039743928,0.554128230968366,0.438977620880838,2.45190236639216,0.751190294532984,0.907457465280168,1.79389635688862,0.213557388818567,0.211931901159562,2.10063767259082,0.412210116953756,1.54584324027377,0.37223371266318,1.18143432568886,0.68205903612839,0.252433774244115,0.184099797284599,0.484938170456436,4.9701342952326,0.503760491138201,0.67824236924195,0.386521706326594,0.272746120590835,0.860413786167011,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,3.12899064659632,0.643240938192885,1.38134921352481,0.928735856063958,1.44375896333917,0,0,0.482022059766964,0.220587945464788,0,0,0,0,0,0,2.80483547606892,0.4115740113314,0,0,0,0.590789906681404,0,0.122988438543114,0.343135620597051,0.768251997860379,0,0.402115889646523,0.648119116109707,0.325808305310325,2.07986957055916,0,0.115930404975077,0.352226082707465,0.577465791044295,0,0.380508304469197,0,0,0.246217006087397,0.234004265139238,0.743155811443641,0,0.503946384596579,0.567100388969546,0.895585227028483,0.581267877027924,0.383382679165211,0,0.44024217006613,0,1.00883967391873,0.12624243342638,0.253991577168676,2.29193055334967,1.17217447210047,0,0.822619941626588,0.600686115687835,0,1.00917975910825,0.87192013766656,0.5867062865676,0.904902010304444,0,0,1.06375246633948,0,0.257207374262142,0,0,0.428933980974443,0,0,0.325736184293735,0.355391948742546,0,0.301439377059586,1.74306691720059,0.499864955910285,0,0,0,1.67737398844108,0,0,1.01346914667305,1.2328579353023,1.61154866915906,0.112085143993527,1.18218456121156,0.862510299438069,0.77005821767849,0.254094624222463,1.30139853857622,0,0,0,0,0,0.414415513436035,0.49076596687656,0,0.813795071099207,4.36738809214695,4.63915370872621,3.46945313074656,1.17141414992713,0.601892199455438,0,0,1.32845119707087,1.29058417979192,0.260650843404249,0.783204629850962,0.343143423810856,0.413536052245775,0.431428401637234,0.853820462427555,0,0,0,1.98486246255021,2.14846762603287,1.12264037773229,1.92208723883551,0,1.12597744800525,1.48418066444991,0.462629081407967,0.710246901252508,0.492762936082855,0,0.581051892299796,0.241718899183244,1.20303882181971,0.276242966807689,0.229628896329213,0.364182336013434,0.262248829918848,0,0.231046011313244,0,0,0.105551628892876,1.13733384070897,0.170093705276516,0.431831832204279,1.54227252690289,0.541892875087706,0.501689773854853,0.254876273045038,0.831076008928724,0.447749509444357,0,0,0.512900250232778,1.31205858279882,1.30151357865721,0.309123034943167,0.0915694648183434,0,1.14853107599234,0.650060246036521,0,0.096670718292122,0.308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|phase1_expression=1.09007027562334,0.856402095563933,1.69145284915165,1.0007329835313,0.446961094427288,0.872338524100369,2.53299878168311,0,0.261185628199839,0.737201809504527,1.39560233594486,1.31064823278103,1.05506791291381,0.37129905888014,0.662794751455832,1.34465029290355,1.20538905604795,1.46062018077475,0.975865597581014,0.61560529038394,0.612002073732759,0,0,0.410623275218653,0.376627918784408,0.0764134057479513,0.246301768349837,0.314843125254717,1.57345710739562,0,1.39334510984468,0.919421224478927,1.204823675113,0.739508020333575,0,0.142169232487422,0,3.32397245119126,3.00816671205213,2.17010870715852,0,0,0,0.726991193897824,2.26725566213286,1.69808842831471,0.697287110717054,3.70051099219643,1.54853185447552,0.863077176966451,4.61089271752381,1.41889337933151,4.13694816883942,3.87290810150296,1.35426486594342,1.88242339542605,2.72906150057846,1.57306439111559,1.22433556948361,6.41858054152187,3.19668562899521,0.989553900560148,4.9865914405408,1.27867425159808,0.580418477257168,1.13477044938228,0.622822248995575,1.7587406567972,4.17186334736161,1.52032191293582,0,3.68277635987565,0.949387162322653,0.845021145247767,0,0.838634582033504,0.44931452458598,0.150176892841506,0,0,0.39783335439818,0.365328307529268,1.75996244461323,0,0,0,0,0,0,0.954053754535364,0,0,0.764546456250458,0,1.12101712596307,0,0.196709770113833,0,0.205601498999509,0.167186495390678,0,0,0,0.222820913770347,0,0.221533894583621,0,0,0.390178042679635,0.328875809207352,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.534880391567015,0.289648807765598,2.43806866313962,0.670700859703636,1.02290049474824,0.722878304769133,1.00267582127178,0.289693037921647,0,0.486634870302636,0.567208902984407,1.33037638477538,0.966182642624386,0.0654895377488563,1.09288586487763,0.370784442784429,0,0.348259474598534,0.797747763113191,0.953962497221368,2.28797964312051,0.74291500265913,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,1.10298924103761,0,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0,0,0,0.872188104285069,1.98788780678127,2.27934920996244,4.76673050927588,1.43418310374407,0.709336764396714,1.68203280042692,0,0.24666754841716,0.933633106199299,0.269421344139376,0.980771418680752,1.05950199351452,0.576175924479999,0,0.624320153660641,0,0.448346041655403,0,0,0.421352420106746,1.02077085627447,0.737005903870608,0.723280468230358,1.18800285728205,0.494533858557114,0.910161361938026,0,0.168336113954066,0.250237039743928,0.554128230968366,0.438977620880838,2.45190236639216,0.751190294532984,0.907457465280168,1.79389635688862,0.213557388818567,0.211931901159562,2.10063767259082,0.412210116953756,1.54584324027377,0.37223371266318,1.18143432568886,0.68205903612839,0.252433774244115,0.184099797284599,0.484938170456436,4.9701342952326,0.503760491138201,0.67824236924195,0.386521706326594,0.272746120590835,0.860413786167011,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,3.12899064659632,0.643240938192885,1.38134921352481,0.928735856063958,1.44375896333917,0,0,0.482022059766964,0.220587945464788,0,0,0,0,0,0,2.80483547606892,0.4115740113314,0,0,0,0.590789906681404,0,0.122988438543114,0.343135620597051,0.768251997860379,0,0.402115889646523,0.648119116109707,0.325808305310325,2.07986957055916,0,0.115930404975077,0.352226082707465,0.577465791044295,0,0.380508304469197,0,0,0.246217006087397,0.234004265139238,0.743155811443641,0,0.503946384596579,0.567100388969546,0.895585227028483,0.581267877027924,0.383382679165211,0,0.44024217006613,0,1.00883967391873,0.12624243342638,0.253991577168676,2.29193055334967,1.17217447210047,0,0.822619941626588,0.600686115687835,0,1.00917975910825,0.87192013766656,0.5867062865676,0.904902010304444,0,0,1.06375246633948,0,0.257207374262142,0,0,0.428933980974443,0,0,0.325736184293735,0.355391948742546,0,0.301439377059586,1.74306691720059,0.499864955910285,0,0,0,1.67737398844108,0,0,1.01346914667305,1.2328579353023,1.61154866915906,0.112085143993527,1.18218456121156,0.862510299438069,0.77005821767849,0.254094624222463,1.30139853857622,0,0,0,0,0,0.414415513436035,0.49076596687656,0,0.813795071099207,4.36738809214695,4.63915370872621,3.46945313074656,1.17141414992713,0.601892199455438,0,0,1.32845119707087,1.29058417979192,0.260650843404249,0.783204629850962,0.343143423810856,0.413536052245775,0.431428401637234,0.853820462427555,0,0,0,1.98486246255021,2.14846762603287,1.12264037773229,1.92208723883551,0,1.12597744800525,1.48418066444991,0.462629081407967,0.710246901252508,0.492762936082855,0,0.581051892299796,0.241718899183244,1.20303882181971,0.276242966807689,0.229628896329213,0.364182336013434,0.262248829918848,0,0.231046011313244,0,0,0.105551628892876,1.13733384070897,0.170093705276516,0.431831832204279,1.54227252690289,0.541892875087706,0.501689773854853,0.254876273045038,0.831076008928724,0.447749509444357,0,0,0.512900250232778,1.31205858279882,1.30151357865721,0.309123034943167,0.0915694648183434,0,1.14853107599234,0.650060246036521,0,0.096670718292122,0.308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| ||
|short_description=p3@SSH1 | |short_description=p3@SSH1 | ||
}} | }} |
Latest revision as of 05:51, 16 September 2015
Short description: | p3@SSH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SSH1_5end |
Coexpression cluster: | NA |
Association with transcript: | 21bp_to_ENST00000360239, NM_001161330, NM_018984, uc001tnm.2, uc001tnn.3_5end |
EntrezGene: | SSH1 |
HGNC: | 30579 |
UniProt: | Q8WYL5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.77e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.77e-17 | 42 |
defensive cell | 7.74e-14 | 48 |
phagocyte | 7.74e-14 | 48 |
macrophage dendritic cell progenitor | 4.25e-10 | 61 |
monopoietic cell | 1.46e-09 | 59 |
monocyte | 1.46e-09 | 59 |
monoblast | 1.46e-09 | 59 |
promonocyte | 1.46e-09 | 59 |
granulocyte monocyte progenitor cell | 2.88e-09 | 67 |
myeloid leukocyte | 8.81e-09 | 72 |
multi fate stem cell | 1.30e-08 | 427 |
myeloid lineage restricted progenitor cell | 1.62e-08 | 66 |
vascular associated smooth muscle cell | 3.09e-08 | 32 |
somatic stem cell | 3.63e-08 | 433 |
stem cell | 5.79e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.75e-11 | 167 |
lateral plate mesoderm | 1.58e-10 | 203 |
bone marrow | 8.12e-09 | 76 |
bone element | 2.19e-08 | 82 |
mesoderm | 5.28e-08 | 315 |
mesoderm-derived structure | 5.28e-08 | 315 |
presumptive mesoderm | 5.28e-08 | 315 |
artery | 4.19e-07 | 42 |
arterial blood vessel | 4.19e-07 | 42 |
arterial system | 4.19e-07 | 42 |
skeletal element | 5.86e-07 | 90 |
skeletal system | 9.52e-07 | 100 |