FFCP PHASE1:Hg19::chr16:85589286..85589316,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:85589286..85589316,+
|short_description=p@chr16:85589286..85589316,+
|description=CAGE_peak_at_chr16:85589286..85589316,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:85589286..85589316,+ | |||
|coexpression_cluster_id=C3595 | |||
|description=CAGE_peak_at_chr16:85589286..85589316,+ | |||
|id=chr16:85589286..85589316,+ | |||
|ontology_enrichment_celltype=CL:0000763!2.74e-25!112;CL:0000049!2.74e-25!112;CL:0000037!1.84e-21!172;CL:0000566!1.84e-21!172;CL:0000766!2.53e-21!76;CL:0002032!9.42e-21!165;CL:0000837!9.42e-21!165;CL:0000988!1.17e-20!182;CL:0000860!8.98e-18!45;CL:0002057!1.17e-17!42;CL:0000839!6.41e-17!70;CL:0000557!7.05e-17!71;CL:0000738!8.24e-15!140;CL:0002194!4.51e-14!63;CL:0000576!4.51e-14!63;CL:0000040!4.51e-14!63;CL:0000559!4.51e-14!63;CL:0002009!9.50e-14!65;CL:0002031!1.38e-12!124;CL:0002087!3.26e-11!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.17e-16;33!CL:0002057;4.17e-16;33!CL:0000766;6.21e-12;69!CL:0000473;1.11e-11;39!CL:0000234;1.11e-11;39!CL:0000576;1.51e-11;48!CL:0000763;2.05e-09;100!CL:0000094;2.41e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,8.21e-29,108;CL:0000049,8.21e-29,108;CL:0000766,3.63e-25,72;CL:0000037,8.13e-24,168;CL:0000988,8.58e-24,177;CL:0002032,2.38e-23,161;CL:0000837,2.38e-23,161;CL:0000860,3.62e-20,42;CL:0002057,3.62e-20,42;CL:0000839,6.17e-20,66;CL:0000557,1.69e-19,67;CL:0000473,1.65e-17,48;CL:0000234,1.65e-17,48;CL:0002194,1.40e-16,59;CL:0000576,1.40e-16,59;CL:0000040,1.40e-16,59;CL:0000559,1.40e-16,59;CL:0000738,1.56e-16,136;CL:0002009,8.19e-16,61;CL:0002031,2.45e-14,120;CL:0002087,8.25e-13,115;CL:0000094,2.56e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;9.55e-15;42!CL:0000049;1.13e-08;108 | |||
|ontology_enrichment_disease=DOID:8692!2.11e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.68e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,7.01e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.95e-21!102;UBERON:0003061!1.95e-21!102;UBERON:0002193!8.60e-17!112;UBERON:0002371!5.50e-15!80;UBERON:0001474!1.53e-14!86;UBERON:0002405!1.96e-10!115;UBERON:0004765!8.13e-10!101;UBERON:0001434!8.13e-10!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.36e-07;15!UBERON:0000179;1.36e-07;15!UBERON:0000463;1.36e-07;15!UBERON:0000922;9.05e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.25e-23,98;UBERON:0003061,1.25e-23,98;UBERON:0002193,3.10e-18,108;UBERON:0002371,1.22e-16,76;UBERON:0001474,7.47e-16,82;UBERON:0002405,7.15e-13,93;UBERON:0004765,3.34e-12,90;UBERON:0001434,2.22e-09,100;UBERON:0000178,2.02e-07,15;UBERON:0000179,2.02e-07,15;UBERON:0000463,2.02e-07,15 | |||
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| ||
|short_description=p@chr16:85589286..85589316,+ | |||
}} | }} |
Latest revision as of 12:59, 25 July 2015
Short description: | p@chr16:85589286..85589316, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:85589286..85589316, + |
Coexpression cluster: | C3595_acute_Mast_parietal_chronic_placenta_choriocarcinoma_Neutrophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 8.21e-29 | 108 |
common myeloid progenitor | 8.21e-29 | 108 |
myeloid leukocyte | 3.63e-25 | 72 |
hematopoietic stem cell | 8.13e-24 | 168 |
hematopoietic cell | 8.58e-24 | 177 |
hematopoietic oligopotent progenitor cell | 2.38e-23 | 161 |
hematopoietic multipotent progenitor cell | 2.38e-23 | 161 |
classical monocyte | 3.62e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.62e-20 | 42 |
myeloid lineage restricted progenitor cell | 6.17e-20 | 66 |
granulocyte monocyte progenitor cell | 1.69e-19 | 67 |
defensive cell | 1.65e-17 | 48 |
phagocyte | 1.65e-17 | 48 |
monopoietic cell | 1.40e-16 | 59 |
monocyte | 1.40e-16 | 59 |
monoblast | 1.40e-16 | 59 |
promonocyte | 1.40e-16 | 59 |
leukocyte | 1.56e-16 | 136 |
macrophage dendritic cell progenitor | 8.19e-16 | 61 |
hematopoietic lineage restricted progenitor cell | 2.45e-14 | 120 |
nongranular leukocyte | 8.25e-13 | 115 |
granulocyte | 2.56e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.25e-23 | 98 |
blood island | 1.25e-23 | 98 |
hemolymphoid system | 3.10e-18 | 108 |
bone marrow | 1.22e-16 | 76 |
bone element | 7.47e-16 | 82 |
immune system | 7.15e-13 | 93 |
skeletal element | 3.34e-12 | 90 |
skeletal system | 2.22e-09 | 100 |
blood | 2.02e-07 | 15 |
haemolymphatic fluid | 2.02e-07 | 15 |
organism substance | 2.02e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 7.01e-08 | 31 |