FFCP PHASE1:Hg19::chr8:69901730..69901746,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:69901730..69901746,+ | |||
|coexpression_cluster_id=C1287 | |||
|description=CAGE_peak_at_chr8:69901730..69901746,+ | |description=CAGE_peak_at_chr8:69901730..69901746,+ | ||
|id=chr8:69901730..69901746,+ | |id=chr8:69901730..69901746,+ | ||
|ontology_enrichment_celltype=CL:0002620!7.67e-24!23;CL:0000055!1.64e-12!180;CL:0000057!3.94e-11!75 | |ontology_enrichment_celltype=CL:0002620!7.67e-24!23;CL:0000055!1.64e-12!180;CL:0000057!3.94e-11!75 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.16e-13;23!CL:0000222;2.44e-08;1!CL:0002594;9.01e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.39e-13,23;CL:0002594,8.71e-08,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!2.25e-07!5;DOID:450!2.25e-07!5;DOID:66!2.25e-07!5;DOID:423!2.25e-07!5;DOID:0080000!2.25e-07!5;DOID:11722!2.25e-07!5 | |ontology_enrichment_disease=DOID:17!2.25e-07!5;DOID:450!2.25e-07!5;DOID:66!2.25e-07!5;DOID:423!2.25e-07!5;DOID:0080000!2.25e-07!5;DOID:11722!2.25e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:4231;5.64e-14;2!DOID:1907;5.64e-14;2!DOID:201;2.54e-10;6!DOID:0060100;2.54e-10;6!DOID:3112;1.65e-08;1!DOID:3571;3.96e-08;1!DOID:0060085;7.85e-08;1!DOID:3165;7.85e-08;1!DOID:0060121;7.85e-08;1!DOID:2438;7.85e-08;1!DOID:4418;7.85e-08;1!DOID:2513;7.85e-08;1!DOID:4235;7.85e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4231,1.02e-13,2;DOID:1907,1.02e-13,2;DOID:201,4.06e-10,6;DOID:0060100,4.06e-10,6;DOID:3112,1.65e-08,1;DOID:3571,3.34e-08,1;DOID:2513,5.79e-08,1;DOID:4235,6.19e-08,1;DOID:0060085,1.14e-07,1;DOID:3165,1.14e-07,1;DOID:0060121,1.14e-07,1;DOID:2438,1.14e-07,1;DOID:4418,1.14e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002097!3.44e-17!40;UBERON:0002199!1.18e-14!45;UBERON:0002416!1.18e-14!45 | |ontology_enrichment_uberon=UBERON:0002097!3.44e-17!40;UBERON:0002199!1.18e-14!45;UBERON:0002416!1.18e-14!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;7.35e-12;41!UBERON:0002199;2.63e-08;46!UBERON:0002416;2.63e-08;46!UBERON:0007195;2.71e-08;1!UBERON:0001310;9.01e-08;4!UBERON:0000014;2.00e-07;4!UBERON:0003102;2.28e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.53e-14,41;UBERON:0002199,8.90e-13,46;UBERON:0002416,8.90e-13,46;UBERON:0007195,2.71e-08,1;UBERON:0001310,8.71e-08,4;UBERON:0000014,2.07e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.618831764800233,0.331397375727916,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0.560677600142307,0,0.24666754841716,0,0.404132016209064,0,0,0.576175924479999,0,0,0,0,0,0.161872944368132,0.280901613404497,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,8.07253360599879,0.213557388818567,0,0.600182192168805,0.515262646192195,0.515281080091258,0,2.86919764810153,0.68205903612839,2.01947019395292,0.0920498986422993,0.161646056818812,6.74518225781567,5.33986120606493,0.67824236924195,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,1.690605505112,0.531876233169741,0,0,1.41849132023278,0.532844358032199,0,0,0,0.325736184293735,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0.434343920002738,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0.415941723061614,0.178428988797162,3.78485796081443,0.117141414992713,0.300946099727719,0,2.0694614258501,1.99267679560631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0.096670718292122,0,0,0.689182862422653,0.214840489736547,0,0,0,0,0,0.382838137483752,0,0.464845549297286,0.62962469366128,0,0,0,0,0,0,0,0.949138274156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43492452355245,0,0,0,0.294747123039363,3.92338156629375,0,0,0,0,0,0,0,0,0,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,1.86623752597084,0,0,0,0,0,4.44547960578548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411125773940253,1.19228767021794,0,0,0.160317640503067,0,0,0,0,0,1.29649318189335,0.745515213392595,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,2.88239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32320740342694,0,0,0,0,0,0,0,0,0,0,6.3043568060606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.53168342911599,0.521745061811734,0,0,0.406870733204662,0.363697318405119,0,0,0,13.2009162338841,0,0,5.04739592914604,0,0,0,0.226705925512272,0,1.22368352253234,0,0,0,0,0,0,0,0,1.21543982470953,0,0,0,0,0.327609848846413,0,0,0,0,0,1.13503190713367,1.28874165176289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0,0,0,14.0843849058683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0.426067023795788,0,0,0.31020638566432,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69927114687817,0,0,0,0,1.41157948686277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90624166387043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.618831764800233,0.331397375727916,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0.560677600142307,0,0.24666754841716,0,0.404132016209064,0,0,0.576175924479999,0,0,0,0,0,0.161872944368132,0.280901613404497,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,8.07253360599879,0.213557388818567,0,0.600182192168805,0.515262646192195,0.515281080091258,0,2.86919764810153,0.68205903612839,2.01947019395292,0.0920498986422993,0.161646056818812,6.74518225781567,5.33986120606493,0.67824236924195,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,1.690605505112,0.531876233169741,0,0,1.41849132023278,0.532844358032199,0,0,0,0.325736184293735,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0.434343920002738,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0.415941723061614,0.178428988797162,3.78485796081443,0.117141414992713,0.300946099727719,0,2.0694614258501,1.99267679560631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0.096670718292122,0,0,0.689182862422653,0.214840489736547,0,0,0,0,0,0.382838137483752,0,0.464845549297286,0.62962469366128,0,0,0,0,0,0,0,0.949138274156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43492452355245,0,0,0,0.294747123039363,3.92338156629375,0,0,0,0,0,0,0,0,0,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,1.86623752597084,0,0,0,0,0,4.44547960578548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411125773940253,1.19228767021794,0,0,0.160317640503067,0,0,0,0,0,1.29649318189335,0.745515213392595,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,2.88239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32320740342694,0,0,0,0,0,0,0,0,0,0,6.3043568060606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.53168342911599,0.521745061811734,0,0,0.406870733204662,0.363697318405119,0,0,0,13.2009162338841,0,0,5.04739592914604,0,0,0,0.226705925512272,0,1.22368352253234,0,0,0,0,0,0,0,0,1.21543982470953,0,0,0,0,0.327609848846413,0,0,0,0,0,1.13503190713367,1.28874165176289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0,0,0,14.0843849058683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0.426067023795788,0,0,0.31020638566432,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69927114687817,0,0,0,0,1.41157948686277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90624166387043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr8:69901730..69901746,+ | |short_description=p@chr8:69901730..69901746,+ | ||
}} | }} |
Latest revision as of 19:39, 31 July 2015
Short description: | p@chr8:69901730..69901746, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:69901730..69901746, + |
Coexpression cluster: | C1287_mesenchymal_Fibroblast_mesodermal_papillary_Smooth_hepatic_basal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.39e-13 | 23 |
smooth muscle cell of the umbilical artery | 8.71e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.53e-14 | 41 |
integument | 8.90e-13 | 46 |
integumental system | 8.90e-13 | 46 |
stroma of bone marrow | 2.71e-08 | 1 |
umbilical artery | 8.71e-08 | 4 |
zone of skin | 2.07e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
histiocytoma | 1.02e-13 | 2 |
malignant fibroxanthoma | 1.02e-13 | 2 |
connective tissue cancer | 4.06e-10 | 6 |
musculoskeletal system cancer | 4.06e-10 | 6 |
papillary adenocarcinoma | 1.65e-08 | 1 |
liver cancer | 3.34e-08 | 1 |
basal cell carcinoma | 5.79e-08 | 1 |
spindle cell sarcoma | 6.19e-08 | 1 |
organ system benign neoplasm | 1.14e-07 | 1 |
skin benign neoplasm | 1.14e-07 | 1 |
integumentary system benign neoplasm | 1.14e-07 | 1 |
dermis tumor | 1.14e-07 | 1 |
cutaneous fibrous histiocytoma | 1.14e-07 | 1 |